RNA–Protein interactions for RNA: ENST00000554574.1

PPP4R3A-204, Transcript of protein phosphatase 4 regulatory subunit 3A, human

TSL 2

Gene PPP4R3A, Length 1,944 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R3A-204	ENST00000554574	SLC1A1	P43005	524 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	PEX5	P50542	639 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	RAD23B	P54727	409 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	PPP2CB	P62714	309 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	PPP2CA	P67775	309 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	RBP5	P82980	135 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	SP3	Q02447	781 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	PRKCZ	Q05513	592 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	MYO1E	Q12965	1108 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	MAMLD1	Q13495	774 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	KCNA10	Q16322	511 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	RETSAT	Q6NUM9	610 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	SCARA5	Q6ZMJ2	495 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	CCNI2	Q6ZMN8	369 aa	Predicted RBP	4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	RPAIN	Q86UA6	219 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	TAX1BP1	Q86VP1	789 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	ESX1	Q8N693	406 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	LRRC52	Q8N7C0	313 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	EIF1AD	Q8N9N8	165 aa	Known RBP	4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	TMEM35B	Q8NCS4	154 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	POC1B	Q8TC44	478 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	GNRHR2	Q96P88	292 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	RTKN	Q9BST9	563 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	DDX23	Q9BUQ8	820 aa	Known RBP	4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	TRIM6	Q9C030	488 aa	Predicted RBP	4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	LHX5	Q9H2C1	402 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	SLC25A32	Q9H2D1	315 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	TP63	Q9H3D4	680 aa	Predicted RBP	4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	FAM83D	Q9H4H8	585 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	SLITRK6	Q9H5Y7	841 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	ZBTB26	Q9HCK0	441 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	SAYSD1	Q9NPB0	183 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	PARVA	Q9NVD7	372 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	PLA2G3	Q9NZ20	509 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	OGFR	Q9NZT2	677 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	LCMT1	Q9UIC8	334 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	ANAPC7	Q9UJX3	599 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	PIN4	Q9Y237	131 aa	Known RBP	4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	RAD54B	Q9Y620	910 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	ZNF638	Q14966	1978 aa	Known RBP	4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	GOLGA6L10	A0A0M3HER8	536 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	TCRBV5S1A1T	A0A578	114 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	FAM170A	A1A519	330 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574		M0QZ92	97 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	LEFTY2	O00292	366 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	SPOP	O43791	374 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	RECQL4	O94761	1208 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	IPO13	O94829	963 aa	Known RBP	4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	PGK1	P00558	417 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	FGG	P02679	453 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	MAN1A1	P33908	653 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	RPS19	P39019	145 aa	Known RBP	4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	PXN	P49023	591 aa	Predicted RBP	4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	GSC	P56915	257 aa	Predicted RBP	4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	LOXL3	P58215	753 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	RNASE9	P60153	205 aa	Known RBP	4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	MRPS6	P82932	125 aa	Known RBP	4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	MPP1	Q00013	466 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	MC2R	Q01718	297 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	TAP1	Q03518	808 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	ZNF844	Q08AG5	666 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	TRIM71	Q2Q1W2	868 aa	Known RBP	4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	DEFB115	Q30KQ5	88 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	PTCHD3	Q3KNS1	767 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	XKR4	Q5GH76	650 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	C1QL3	Q5VWW1	255 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	CXCL17	Q6UXB2	119 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	SERINC5	Q86VE9	423 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	HEATR4	Q86WZ0	1026 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	SLC44A2	Q8IWA5	706 aa	Predicted RBP	4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	CCDC117	Q8IWD4	279 aa	Predicted RBP	4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	KRT222	Q8N1A0	295 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	SLC4A11	Q8NBS3	891 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	CPT1C	Q8TCG5	803 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	ZNF483	Q8TF39	744 aa	Predicted RBP	4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	HDAC7	Q8WUI4	952 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	THAP4	Q8WY91	577 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	TFAP2B	Q92481	460 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	KRT35	Q92764	455 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	CAPNS2	Q96L46	248 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	ZMAT2	Q96NC0	199 aa	Known RBP	4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	KRT12	Q99456	494 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	C11orf70	Q9BRQ4	267 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	SDCBP2	Q9H190	292 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	NXF3	Q9H4D5	531 aa	Known RBP	4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	SMYD3	Q9H7B4	428 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	CXorf36	Q9H7Y0	433 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	CHORDC1	Q9UHD1	332 aa	Predicted RBP	4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	KIAA1257	Q9ULG3	409 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	CA14	Q9ULX7	337 aa		4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	BARX2	Q9UMQ3	279 aa	Predicted RBP	4.87	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	PATJ	Q8NI35	1801 aa		4.86	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	CCDC195	A0A1B0GUA6	201 aa		4.86	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	TMEM110-MUSTN1	A8MSY1	372 aa		4.86	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	NPIPB6	E9PJ23	425 aa		4.86	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	PROSC	O94903	275 aa		4.86	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	HEXIM1	O94992	359 aa	Known RBP	4.86	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	CD4	P01730	458 aa		4.86	□□□□□ -1.63
PPP4R3A-204	ENST00000554574	KCNE1	P15382	129 aa		4.86	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 58 ms