RNA–Protein interactions for RNA: ENST00000554308.5

PPP4R3A-201, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-201ENST00000554308 ENO3P13929 434 aaPredicted RBP14.68□□□□□ -0.06
PPP4R3A-201ENST00000554308 ARCN1P48444 511 aaKnown RBP14.68□□□□□ -0.06
PPP4R3A-201ENST00000554308 CDH4P55283 916 aa14.68□□□□□ -0.06
PPP4R3A-201ENST00000554308 LSM12Q3MHD2 195 aaKnown RBP14.68□□□□□ -0.06
PPP4R3A-201ENST00000554308 SIRPB2Q5JXA9 342 aa14.68□□□□□ -0.06
PPP4R3A-201ENST00000554308 ZNF470Q6ECI4 717 aa14.68□□□□□ -0.06
PPP4R3A-201ENST00000554308 PTAR1Q7Z6K3 402 aaPredicted RBP14.68□□□□□ -0.06
PPP4R3A-201ENST00000554308 AMIGO2Q86SJ2 522 aa14.68□□□□□ -0.06
PPP4R3A-201ENST00000554308 LCA5Q86VQ0 697 aa14.68□□□□□ -0.06
PPP4R3A-201ENST00000554308 TCEAL8Q8IYN2 117 aa14.68□□□□□ -0.06
PPP4R3A-201ENST00000554308 PLD4Q96BZ4 506 aa14.68□□□□□ -0.06
PPP4R3A-201ENST00000554308 GATA5Q9BWX5 397 aaPredicted RBP14.68□□□□□ -0.06
PPP4R3A-201ENST00000554308 KLF16Q9BXK1 252 aaPredicted RBP14.68□□□□□ -0.06
PPP4R3A-201ENST00000554308 MUC3BQ9H195 1237 aa14.68□□□□□ -0.06
PPP4R3A-201ENST00000554308 ATP13A1Q9HD20 1204 aa14.68□□□□□ -0.06
PPP4R3A-201ENST00000554308 VPS45Q9NRW7 570 aa14.68□□□□□ -0.06
PPP4R3A-201ENST00000554308 RHBDL2Q9NX52 303 aa14.68□□□□□ -0.06
PPP4R3A-201ENST00000554308 HEMK1Q9Y5R4 338 aaPredicted RBP14.68□□□□□ -0.06
PPP4R3A-201ENST00000554308 H3BSA7 217 aa14.68□□□□□ -0.06
PPP4R3A-201ENST00000554308 PHGDHO43175 533 aaKnown RBP14.68□□□□□ -0.06
PPP4R3A-201ENST00000554308 C2P06681 752 aa14.68□□□□□ -0.06
PPP4R3A-201ENST00000554308 RHOCP08134 193 aa14.68□□□□□ -0.06
PPP4R3A-201ENST00000554308 GJA1P17302 382 aa14.68□□□□□ -0.06
PPP4R3A-201ENST00000554308 HOXD9P28356 352 aaPredicted RBP14.68□□□□□ -0.06
PPP4R3A-201ENST00000554308 PRDX6P30041 224 aa14.68□□□□□ -0.06
PPP4R3A-201ENST00000554308 SERPINB8P50452 374 aa14.68□□□□□ -0.06
PPP4R3A-201ENST00000554308 GALNT3Q14435 633 aa14.68□□□□□ -0.06
PPP4R3A-201ENST00000554308 USP10Q14694 798 aaKnown RBP14.68□□□□□ -0.06
PPP4R3A-201ENST00000554308 SPNS2Q8IVW8 549 aa14.68□□□□□ -0.06
PPP4R3A-201ENST00000554308 KLHL23Q8NBE8 558 aa14.68□□□□□ -0.06
PPP4R3A-201ENST00000554308 KYQ8NBH2 561 aa14.68□□□□□ -0.06
PPP4R3A-201ENST00000554308 TRMT2BQ96GJ1 504 aaKnown RBP14.68□□□□□ -0.06
PPP4R3A-201ENST00000554308 CATSPER2Q96P56 530 aa14.68□□□□□ -0.06
PPP4R3A-201ENST00000554308 NUF2Q9BZD4 464 aa14.68□□□□□ -0.06
PPP4R3A-201ENST00000554308 MAGEH1Q9H213 219 aa14.68□□□□□ -0.06
PPP4R3A-201ENST00000554308 CXXC1Q9P0U4 656 aaPredicted RBP14.68□□□□□ -0.06
PPP4R3A-201ENST00000554308 KCTD3Q9Y597 815 aa14.68□□□□□ -0.06
PPP4R3A-201ENST00000554308 KIAA0355O15063 1070 aa14.67□□□□□ -0.06
PPP4R3A-201ENST00000554308 TIMM44O43615 452 aa14.67□□□□□ -0.06
PPP4R3A-201ENST00000554308 CLDN11O75508 207 aa14.67□□□□□ -0.06
PPP4R3A-201ENST00000554308 GABRR2P28476 465 aa14.67□□□□□ -0.06
PPP4R3A-201ENST00000554308 RPL26P61254 145 aaKnown RBP14.67□□□□□ -0.06
PPP4R3A-201ENST00000554308 CYP4F8P98187 520 aa14.67□□□□□ -0.06
PPP4R3A-201ENST00000554308 ZNF460Q14592 562 aa14.67□□□□□ -0.06
PPP4R3A-201ENST00000554308 INSCQ1MX18 579 aa14.67□□□□□ -0.06
PPP4R3A-201ENST00000554308 PIGGQ5H8A4 983 aa14.67□□□□□ -0.06
PPP4R3A-201ENST00000554308 RARS2Q5T160 578 aaKnown RBP14.67□□□□□ -0.06
PPP4R3A-201ENST00000554308 LINGO4Q6UY18 593 aa14.67□□□□□ -0.06
PPP4R3A-201ENST00000554308 BNC2Q6ZN30 1099 aaPredicted RBP14.67□□□□□ -0.06
PPP4R3A-201ENST00000554308 ZC3HC1Q86WB0 502 aaKnown RBP14.67□□□□□ -0.06
PPP4R3A-201ENST00000554308 TICAM1Q8IUC6 712 aa14.67□□□□□ -0.06
PPP4R3A-201ENST00000554308 OR6P1Q8NGX9 317 aa14.67□□□□□ -0.06
PPP4R3A-201ENST00000554308 BLOC1S5Q8TDH9 187 aa14.67□□□□□ -0.06
PPP4R3A-201ENST00000554308 ARMC5Q96C12 935 aa14.67□□□□□ -0.06
PPP4R3A-201ENST00000554308 UNKQ9C0B0 810 aaKnown RBP14.67□□□□□ -0.06
PPP4R3A-201ENST00000554308 TK2O00142 265 aa14.67□□□□□ -0.06
PPP4R3A-201ENST00000554308 AURKAO14965 403 aa14.67□□□□□ -0.06
PPP4R3A-201ENST00000554308 CXCL14O95715 111 aa14.67□□□□□ -0.06
PPP4R3A-201ENST00000554308 C1RP00736 705 aa14.67□□□□□ -0.06
PPP4R3A-201ENST00000554308 ARSAP15289 507 aa14.67□□□□□ -0.06
PPP4R3A-201ENST00000554308 SLC5A2P31639 672 aa14.67□□□□□ -0.06
PPP4R3A-201ENST00000554308 SLC1A2P43004 574 aa14.67□□□□□ -0.06
PPP4R3A-201ENST00000554308 LBX1P52954 281 aa14.67□□□□□ -0.06
PPP4R3A-201ENST00000554308 OXCT1P55809 520 aa14.67□□□□□ -0.06
PPP4R3A-201ENST00000554308 HPCAP84074 193 aa14.67□□□□□ -0.06
PPP4R3A-201ENST00000554308 MTA1Q13330 715 aa14.67□□□□□ -0.06
PPP4R3A-201ENST00000554308 PTPRCAPQ14761 206 aa14.67□□□□□ -0.06
PPP4R3A-201ENST00000554308 RNF219Q5W0B1 726 aaPredicted RBP14.67□□□□□ -0.06
PPP4R3A-201ENST00000554308 SPATA6LQ8N4H0 392 aa14.67□□□□□ -0.06
PPP4R3A-201ENST00000554308 CARNMT1Q8N4J0 409 aa14.67□□□□□ -0.06
PPP4R3A-201ENST00000554308 MRPL1Q9BYD6 325 aaKnown RBP14.67□□□□□ -0.06
PPP4R3A-201ENST00000554308 FAM96AQ9H5X1 160 aa14.67□□□□□ -0.06
PPP4R3A-201ENST00000554308 PDFQ9HBH1 243 aa14.67□□□□□ -0.06
PPP4R3A-201ENST00000554308 TREX1Q9NSU2 369 aa14.67□□□□□ -0.06
PPP4R3A-201ENST00000554308 NDUFA13Q9P0J0 144 aa14.67□□□□□ -0.06
PPP4R3A-201ENST00000554308 REV3LO60673 3130 aa14.67□□□□□ -0.06
PPP4R3A-201ENST00000554308 HEATR9A2RTY3 570 aa14.66□□□□□ -0.06
PPP4R3A-201ENST00000554308 H0Y626 953 aa14.66□□□□□ -0.06
PPP4R3A-201ENST00000554308 TMCC1O94876 653 aa14.66□□□□□ -0.06
PPP4R3A-201ENST00000554308 F11P03951 625 aa14.66□□□□□ -0.06
PPP4R3A-201ENST00000554308 CDK4P11802 303 aa14.66□□□□□ -0.06
PPP4R3A-201ENST00000554308 PAMP19021 973 aa14.66□□□□□ -0.06
PPP4R3A-201ENST00000554308 PPM1AP35813 382 aa14.66□□□□□ -0.06
PPP4R3A-201ENST00000554308 RGRP47804 291 aa14.66□□□□□ -0.06
PPP4R3A-201ENST00000554308 FRG1Q14331 258 aaKnown RBP14.66□□□□□ -0.06
PPP4R3A-201ENST00000554308 C5orf22Q49AR2 442 aa14.66□□□□□ -0.06
PPP4R3A-201ENST00000554308 NEPROQ6NW34 567 aa14.66□□□□□ -0.06
PPP4R3A-201ENST00000554308 LDB1Q86U70 411 aaPredicted RBP14.66□□□□□ -0.06
PPP4R3A-201ENST00000554308 HS6ST3Q8IZP7 471 aa14.66□□□□□ -0.06
PPP4R3A-201ENST00000554308 FIBCD1Q8N539 461 aa14.66□□□□□ -0.06
PPP4R3A-201ENST00000554308 GRIN3AQ8TCU5 1115 aa14.66□□□□□ -0.06
PPP4R3A-201ENST00000554308 FATE1Q969F0 183 aa14.66□□□□□ -0.06
PPP4R3A-201ENST00000554308 TMEM106CQ9BVX2 250 aa14.66□□□□□ -0.06
PPP4R3A-201ENST00000554308 ARNT2Q9HBZ2 717 aa14.66□□□□□ -0.06
PPP4R3A-201ENST00000554308 UBA2Q9UBT2 640 aaPredicted RBP14.66□□□□□ -0.06
PPP4R3A-201ENST00000554308 RAB26Q9ULW5 256 aa14.66□□□□□ -0.06
PPP4R3A-201ENST00000554308 CPQQ9Y646 472 aa14.66□□□□□ -0.06
PPP4R3A-201ENST00000554308 A0A1B0GVM2 712 aa14.66□□□□□ -0.06
PPP4R3A-201ENST00000554308 TCAF2A6NFQ2 919 aa14.66□□□□□ -0.06
PPP4R3A-201ENST00000554308 TBL1XO60907 577 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms