RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 ZFR2Q9UPR6 939 aaKnown RBP8.37□□□□□ -1.07
PSEN1-209ENST00000553855 ITM2BQ9Y287 266 aa8.37□□□□□ -1.07
PSEN1-209ENST00000553855 DYRK1BQ9Y463 629 aa8.37□□□□□ -1.07
PSEN1-209ENST00000553855 PCDHGB2Q9Y5G2 931 aa8.37□□□□□ -1.07
PSEN1-209ENST00000553855 CACNA1GO43497 2377 aa8.36□□□□□ -1.07
PSEN1-209ENST00000553855 SDK1Q7Z5N4 2213 aa8.36□□□□□ -1.07
PSEN1-209ENST00000553855 A0A1W2PR77 199 aa8.36□□□□□ -1.07
PSEN1-209ENST00000553855 GOLGA6CA6NDK9 693 aa8.36□□□□□ -1.07
PSEN1-209ENST00000553855 GOLGA6BA6NDN3 693 aa8.36□□□□□ -1.07
PSEN1-209ENST00000553855 NEMP2A6NFY4 417 aa8.36□□□□□ -1.07
PSEN1-209ENST00000553855 H0Y8X5 98 aa8.36□□□□□ -1.07
PSEN1-209ENST00000553855 RNF103O00237 685 aa8.36□□□□□ -1.07
PSEN1-209ENST00000553855 CACNB4O00305 520 aaPredicted RBP8.36□□□□□ -1.07
PSEN1-209ENST00000553855 PDE2AO00408 941 aaPredicted RBP8.36□□□□□ -1.07
PSEN1-209ENST00000553855 MUSKO15146 869 aa8.36□□□□□ -1.07
PSEN1-209ENST00000553855 PGLSO95336 258 aa8.36□□□□□ -1.07
PSEN1-209ENST00000553855 HLA-DQB2P05538 268 aa8.36□□□□□ -1.07
PSEN1-209ENST00000553855 GOLGA6DP0CG33 693 aa8.36□□□□□ -1.07
PSEN1-209ENST00000553855 ALPPL2P10696 532 aa8.36□□□□□ -1.07
PSEN1-209ENST00000553855 CEACAM1P13688 526 aa8.36□□□□□ -1.07
PSEN1-209ENST00000553855 CR2P20023 1033 aa8.36□□□□□ -1.07
PSEN1-209ENST00000553855 KELP23276 732 aa8.36□□□□□ -1.07
PSEN1-209ENST00000553855 PTPN7P35236 360 aa8.36□□□□□ -1.07
PSEN1-209ENST00000553855 MMP12P39900 470 aa8.36□□□□□ -1.07
PSEN1-209ENST00000553855 CD86P42081 329 aa8.36□□□□□ -1.07
PSEN1-209ENST00000553855 GRK6P43250 576 aa8.36□□□□□ -1.07
PSEN1-209ENST00000553855 MARCKSL1P49006 195 aa8.36□□□□□ -1.07
PSEN1-209ENST00000553855 CLDN2P57739 230 aa8.36□□□□□ -1.07
PSEN1-209ENST00000553855 YPEL5P62699 121 aa8.36□□□□□ -1.07
PSEN1-209ENST00000553855 DSC2Q02487 901 aa8.36□□□□□ -1.07
PSEN1-209ENST00000553855 SLC10A2Q12908 348 aaPredicted RBP8.36□□□□□ -1.07
PSEN1-209ENST00000553855 PDE1CQ14123 709 aaPredicted RBP8.36□□□□□ -1.07
PSEN1-209ENST00000553855 RPS6KA1Q15418 735 aa8.36□□□□□ -1.07
PSEN1-209ENST00000553855 TAZQ16635 292 aa8.36□□□□□ -1.07
PSEN1-209ENST00000553855 ZNF423Q2M1K9 1284 aa8.36□□□□□ -1.07
PSEN1-209ENST00000553855 TEX44Q53QW1 395 aa8.36□□□□□ -1.07
PSEN1-209ENST00000553855 DENND2CQ68D51 928 aa8.36□□□□□ -1.07
PSEN1-209ENST00000553855 ITPRIPL1Q6GPH6 555 aa8.36□□□□□ -1.07
PSEN1-209ENST00000553855 PSAPL1Q6NUJ1 521 aa8.36□□□□□ -1.07
PSEN1-209ENST00000553855 DARS2Q6PI48 645 aaKnown RBP8.36□□□□□ -1.07
PSEN1-209ENST00000553855 Q6ZSR6 202 aa8.36□□□□□ -1.07
PSEN1-209ENST00000553855 PID1Q7Z2X4 250 aa8.36□□□□□ -1.07
PSEN1-209ENST00000553855 ABI3BPQ7Z7G0 1075 aa8.36□□□□□ -1.07
PSEN1-209ENST00000553855 NAXDQ8IW45 347 aa8.36□□□□□ -1.07
PSEN1-209ENST00000553855 PGBD5Q8N414 524 aa8.36□□□□□ -1.07
PSEN1-209ENST00000553855 LRRC57Q8N9N7 239 aa8.36□□□□□ -1.07
PSEN1-209ENST00000553855 TMEM145Q8NBT3 493 aa8.36□□□□□ -1.07
PSEN1-209ENST00000553855 LPCAT1Q8NF37 534 aa8.36□□□□□ -1.07
PSEN1-209ENST00000553855 TRIM58Q8NG06 486 aa8.36□□□□□ -1.07
PSEN1-209ENST00000553855 OR2I1PQ8NGU4 316 aa8.36□□□□□ -1.07
PSEN1-209ENST00000553855 BTN2A2Q8WVV5 523 aa8.36□□□□□ -1.07
PSEN1-209ENST00000553855 HTR3CQ8WXA8 447 aa8.36□□□□□ -1.07
PSEN1-209ENST00000553855 SCRN2Q96FV2 425 aa8.36□□□□□ -1.07
PSEN1-209ENST00000553855 AGAP3Q96P47 875 aa8.36□□□□□ -1.07
PSEN1-209ENST00000553855 PPP1R2P1Q96PQ5 205 aa8.36□□□□□ -1.07
PSEN1-209ENST00000553855 SRPK1Q96SB4 655 aaKnown RBP8.36□□□□□ -1.07
PSEN1-209ENST00000553855 CDC6Q99741 560 aa8.36□□□□□ -1.07
PSEN1-209ENST00000553855 ORAI3Q9BRQ5 295 aa8.36□□□□□ -1.07
PSEN1-209ENST00000553855 PCDH9Q9HC56 1237 aa8.36□□□□□ -1.07
PSEN1-209ENST00000553855 GOLGA6AQ9NYA3 693 aa8.36□□□□□ -1.07
PSEN1-209ENST00000553855 B4GALT6Q9UBX8 382 aa8.36□□□□□ -1.07
PSEN1-209ENST00000553855 TRIM10Q9UDY6 481 aa8.36□□□□□ -1.07
PSEN1-209ENST00000553855 TRHDEQ9UKU6 1024 aa8.36□□□□□ -1.07
PSEN1-209ENST00000553855 RALGAPA1Q6GYQ0 2036 aa8.36□□□□□ -1.07
PSEN1-209ENST00000553855 CACNA1BQ00975 2339 aa8.35□□□□□ -1.07
PSEN1-209ENST00000553855 A0A1B0GTQ1 180 aa8.35□□□□□ -1.07
PSEN1-209ENST00000553855 FIGNL2A6NMB9 653 aa8.35□□□□□ -1.07
PSEN1-209ENST00000553855 A8MX80 341 aa8.35□□□□□ -1.07
PSEN1-209ENST00000553855 PSMD11O00231 422 aa8.35□□□□□ -1.07
PSEN1-209ENST00000553855 TRAFD1O14545 582 aaPredicted RBP8.35□□□□□ -1.07
PSEN1-209ENST00000553855 KCNK3O14649 394 aa8.35□□□□□ -1.07
PSEN1-209ENST00000553855 WNT9AO14904 365 aa8.35□□□□□ -1.07
PSEN1-209ENST00000553855 SH3BP5O60239 455 aa8.35□□□□□ -1.07
PSEN1-209ENST00000553855 PCDHGA12O60330 932 aa8.35□□□□□ -1.07
PSEN1-209ENST00000553855 RECQL5O94762 991 aaPredicted RBP8.35□□□□□ -1.07
PSEN1-209ENST00000553855 KCNK5O95279 499 aa8.35□□□□□ -1.07
PSEN1-209ENST00000553855 WNT1P04628 370 aa8.35□□□□□ -1.07
PSEN1-209ENST00000553855 PRKCGP05129 697 aa8.35□□□□□ -1.07
PSEN1-209ENST00000553855 PCCBP05166 539 aa8.35□□□□□ -1.07
PSEN1-209ENST00000553855 PYGLP06737 847 aa8.35□□□□□ -1.07
PSEN1-209ENST00000553855 PECAM1P16284 738 aaPredicted RBP8.35□□□□□ -1.07
PSEN1-209ENST00000553855 ZNF30P17039 623 aa8.35□□□□□ -1.07
PSEN1-209ENST00000553855 CTPS1P17812 591 aa8.35□□□□□ -1.07
PSEN1-209ENST00000553855 ITIH2P19823 946 aa8.35□□□□□ -1.07
PSEN1-209ENST00000553855 ACTN2P35609 894 aa8.35□□□□□ -1.07
PSEN1-209ENST00000553855 PEX5P50542 639 aa8.35□□□□□ -1.07
PSEN1-209ENST00000553855 BLKP51451 505 aa8.35□□□□□ -1.07
PSEN1-209ENST00000553855 EIF3EP60228 445 aaKnown RBP8.35□□□□□ -1.07
PSEN1-209ENST00000553855 HNRNPKP61978 463 aaKnown RBP eCLIP8.35□□□□□ -1.07
PSEN1-209ENST00000553855 CDK18Q07002 472 aa8.35□□□□□ -1.07
PSEN1-209ENST00000553855 TRAF2Q12933 501 aa8.35□□□□□ -1.07
PSEN1-209ENST00000553855 MTM1Q13496 603 aa8.35□□□□□ -1.07
PSEN1-209ENST00000553855 PRKD1Q15139 912 aaPredicted RBP8.35□□□□□ -1.07
PSEN1-209ENST00000553855 GCNT7Q6ZNI0 430 aa8.35□□□□□ -1.07
PSEN1-209ENST00000553855 PARGQ86W56 976 aa8.35□□□□□ -1.07
PSEN1-209ENST00000553855 DEFB124Q8NES8 71 aa8.35□□□□□ -1.07
PSEN1-209ENST00000553855 OR13H1Q8NG92 308 aa8.35□□□□□ -1.07
PSEN1-209ENST00000553855 MAIP1Q8WWC4 291 aa8.35□□□□□ -1.07
PSEN1-209ENST00000553855 NUS1Q96E22 293 aa8.35□□□□□ -1.07
PSEN1-209ENST00000553855 OLFM3Q96PB7 478 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms