RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 CCDC126Q96EE4 140 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 TSPAN17Q96FV3 270 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 GPATCH1Q9BRR8 931 aaKnown RBP6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 ERVK-6Q9BXR3 956 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 SP110Q9HB58 689 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 OLAHQ9NV23 265 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 ANKRD12Q6UB98 2062 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 CCDC162PA2VCL2 907 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 WASH4PA8MWX3 477 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 H3BNH8 94 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 SLC7A4O43246 635 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 AKAP10O43572 662 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 SOAT2O75908 522 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 GOT2P00505 430 aaKnown RBP6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 ZNF37AP17032 561 aaPredicted RBP6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 GRK4P32298 578 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 SOX11P35716 441 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 ACVRL1P37023 503 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 PRAMEP78395 509 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 NFKB2Q00653 900 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 PRKCQQ04759 706 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 GALNT1Q10472 559 aaPredicted RBP6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 TRAP1Q12931 704 aaKnown RBP6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 MAP7Q14244 749 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 PFKFB4Q16877 469 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 NHSL2Q5HYW2 709 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 SAMD4BQ5PRF9 694 aaKnown RBP6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 MARC1Q5VT66 337 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 FAM43BQ6ZT52 329 aaPredicted RBP6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 MRPL10Q7Z7H8 261 aaKnown RBP6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 DHFR2Q86XF0 187 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 ZNF354CQ86Y25 554 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 SLC22A9Q8IVM8 553 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 UMODL1-AS1Q8N2C9 162 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 AFAP1L2Q8N4X5 818 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 OR2T34Q8NGX1 318 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 OR2T3Q8NH03 318 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 CALML6Q8TD86 181 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 BLOC1S5Q8TDH9 187 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 PPWD1Q96BP3 646 aaKnown RBP6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 DUS3LQ96G46 650 aaKnown RBP6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 SLC39A13Q96H72 371 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 NSMCE3Q96MG7 304 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 SMIM14Q96QK8 99 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 CCT7Q99832 543 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 MUC3BQ9H195 1237 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 CAAP1Q9H8G2 361 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 MID1IP1Q9NPA3 183 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 CMTM6Q9NX76 183 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 GMIPQ9P107 970 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 ATXN10Q9UBB4 475 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 PADI3Q9ULW8 664 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 CLEC11AQ9Y240 323 aa6.93□□□□□ -1.3
LINC-ROR-201ENST00000553704 ASPDHA6ND91 283 aa6.92□□□□□ -1.3
LINC-ROR-201ENST00000553704 PAPSS2O95340 614 aaPredicted RBP6.92□□□□□ -1.3
LINC-ROR-201ENST00000553704 H6PDO95479 791 aa6.92□□□□□ -1.3
LINC-ROR-201ENST00000553704 SLC2A3P11169 496 aa6.92□□□□□ -1.3
LINC-ROR-201ENST00000553704 CDK4P11802 303 aa6.92□□□□□ -1.3
LINC-ROR-201ENST00000553704 ZNF23P17027 643 aa6.92□□□□□ -1.3
LINC-ROR-201ENST00000553704 CES1P23141 567 aa6.92□□□□□ -1.3
LINC-ROR-201ENST00000553704 HTR7P34969 479 aa6.92□□□□□ -1.3
LINC-ROR-201ENST00000553704 ALDH3B2P48448 385 aa6.92□□□□□ -1.3
LINC-ROR-201ENST00000553704 NR1H2P55055 460 aa6.92□□□□□ -1.3
LINC-ROR-201ENST00000553704 CTBSQ01459 385 aa6.92□□□□□ -1.3
LINC-ROR-201ENST00000553704 TSPY1Q01534 308 aa6.92□□□□□ -1.3
LINC-ROR-201ENST00000553704 EFEMP1Q12805 493 aa6.92□□□□□ -1.3
LINC-ROR-201ENST00000553704 RAP1GAP2Q684P5 730 aa6.92□□□□□ -1.3
LINC-ROR-201ENST00000553704 HACD2Q6Y1H2 254 aa6.92□□□□□ -1.3
LINC-ROR-201ENST00000553704 ERMP1Q7Z2K6 904 aa6.92□□□□□ -1.3
LINC-ROR-201ENST00000553704 SPPL2CQ8IUH8 684 aa6.92□□□□□ -1.3
LINC-ROR-201ENST00000553704 DDIASQ8IXT1 998 aa6.92□□□□□ -1.3
LINC-ROR-201ENST00000553704 FAM47BQ8NA70 645 aa6.92□□□□□ -1.3
LINC-ROR-201ENST00000553704 TRPC4APQ8TEL6 797 aa6.92□□□□□ -1.3
LINC-ROR-201ENST00000553704 TADA1Q96BN2 335 aa6.92□□□□□ -1.3
LINC-ROR-201ENST00000553704 TEX37Q96LM6 180 aa6.92□□□□□ -1.3
LINC-ROR-201ENST00000553704 SERPINB11Q96P15 392 aa6.92□□□□□ -1.3
LINC-ROR-201ENST00000553704 ATOH8Q96SQ7 321 aa6.92□□□□□ -1.3
LINC-ROR-201ENST00000553704 OSBPL11Q9BXB4 747 aa6.92□□□□□ -1.3
LINC-ROR-201ENST00000553704 ANKRD60Q9BZ19 345 aa6.92□□□□□ -1.3
LINC-ROR-201ENST00000553704 SMOXQ9NWM0 555 aa6.92□□□□□ -1.3
LINC-ROR-201ENST00000553704 ABCD2Q9UBJ2 740 aa6.92□□□□□ -1.3
LINC-ROR-201ENST00000553704 POLG2Q9UHN1 485 aa6.92□□□□□ -1.3
LINC-ROR-201ENST00000553704 USP22Q9UPT9 525 aa6.92□□□□□ -1.3
LINC-ROR-201ENST00000553704 PHF24Q9UPV7 400 aa6.92□□□□□ -1.3
LINC-ROR-201ENST00000553704 MED16Q9Y2X0 877 aa6.92□□□□□ -1.3
LINC-ROR-201ENST00000553704 hCG_2014768A0A024R1R8 64 aa6.92□□□□□ -1.3
LINC-ROR-201ENST00000553704 TMX2-CTNND1H3BSU7 103 aa6.92□□□□□ -1.3
LINC-ROR-201ENST00000553704 TMCC1O94876 653 aa6.92□□□□□ -1.3
LINC-ROR-201ENST00000553704 CLIC3O95833 236 aa6.92□□□□□ -1.3
LINC-ROR-201ENST00000553704 HMBSP08397 361 aa6.92□□□□□ -1.3
LINC-ROR-201ENST00000553704 LINC00032P0C843 101 aa6.92□□□□□ -1.3
LINC-ROR-201ENST00000553704 MTHFD1P11586 935 aaKnown RBP6.92□□□□□ -1.3
LINC-ROR-201ENST00000553704 PRDX3P30048 256 aaKnown RBP6.92□□□□□ -1.3
LINC-ROR-201ENST00000553704 ACADVLP49748 655 aa6.92□□□□□ -1.3
LINC-ROR-201ENST00000553704 ATP4BP51164 291 aa6.92□□□□□ -1.3
LINC-ROR-201ENST00000553704 RENBPP51606 427 aa6.92□□□□□ -1.3
LINC-ROR-201ENST00000553704 DIO3P55073 304 aa6.92□□□□□ -1.3
LINC-ROR-201ENST00000553704 TBX4P57082 545 aa6.92□□□□□ -1.3
LINC-ROR-201ENST00000553704 STX1BP61266 288 aa6.92□□□□□ -1.3
LINC-ROR-201ENST00000553704 HPCAP84074 193 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms