RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 EIF2B5Q13144 721 aaKnown RBP22.78■■□□□ 1.24
TDP1-206ENST00000553569 NFATC4Q14934 902 aa22.78■■□□□ 1.24
TDP1-206ENST00000553569 CDKN3Q16667 212 aa22.78■■□□□ 1.24
TDP1-206ENST00000553569 FAXCQ5TGI0 409 aa22.78■■□□□ 1.24
TDP1-206ENST00000553569 PNCKQ6P2M8 343 aa22.78■■□□□ 1.24
TDP1-206ENST00000553569 TAB3Q8N5C8 712 aaPredicted RBP22.78■■□□□ 1.24
TDP1-206ENST00000553569 SAP25Q8TEE9 199 aa22.78■■□□□ 1.24
TDP1-206ENST00000553569 AP2M1Q96CW1 435 aa22.78■■□□□ 1.24
TDP1-206ENST00000553569 APOL2Q9BQE5 337 aa22.78■■□□□ 1.24
TDP1-206ENST00000553569 GPR63Q9BZJ6 419 aa22.78■■□□□ 1.24
TDP1-206ENST00000553569 ABCG8Q9H221 673 aa22.78■■□□□ 1.24
TDP1-206ENST00000553569 WDR26Q9H7D7 661 aa22.78■■□□□ 1.24
TDP1-206ENST00000553569 AAR2Q9Y312 384 aaKnown RBP22.78■■□□□ 1.24
TDP1-206ENST00000553569 SPO11Q9Y5K1 396 aa22.78■■□□□ 1.24
TDP1-206ENST00000553569 CACNB4O00305 520 aaPredicted RBP22.77■■□□□ 1.24
TDP1-206ENST00000553569 GCATO75600 419 aa22.77■■□□□ 1.24
TDP1-206ENST00000553569 AGTP01019 485 aa22.77■■□□□ 1.24
TDP1-206ENST00000553569 IFNB1P01574 187 aa22.77■■□□□ 1.24
TDP1-206ENST00000553569 TSHRP16473 764 aa22.77■■□□□ 1.24
TDP1-206ENST00000553569 HLA-DPA1P20036 260 aa22.77■■□□□ 1.24
TDP1-206ENST00000553569 HTR1BP28222 390 aa22.77■■□□□ 1.24
TDP1-206ENST00000553569 OLIG2Q13516 323 aa22.77■■□□□ 1.24
TDP1-206ENST00000553569 SLC1A5Q15758 541 aa22.77■■□□□ 1.24
TDP1-206ENST00000553569 INAVAQ3KP66 663 aa22.77■■□□□ 1.24
TDP1-206ENST00000553569 ENPP7Q6UWV6 458 aa22.77■■□□□ 1.24
TDP1-206ENST00000553569 HEATR4Q86WZ0 1026 aa22.77■■□□□ 1.24
TDP1-206ENST00000553569 RHBDD1Q8TEB9 315 aa22.77■■□□□ 1.24
TDP1-206ENST00000553569 SCAMP4Q969E2 229 aa22.77■■□□□ 1.24
TDP1-206ENST00000553569 FUBP1Q96AE4 644 aaKnown RBP22.77■■□□□ 1.24
TDP1-206ENST00000553569 PBKQ96KB5 322 aa22.77■■□□□ 1.24
TDP1-206ENST00000553569 ZFYVE1Q9HBF4 777 aa22.77■■□□□ 1.24
TDP1-206ENST00000553569 MAGEE1Q9HCI5 957 aa22.77■■□□□ 1.24
TDP1-206ENST00000553569 PKD2L2Q9NZM6 624 aa22.77■■□□□ 1.24
TDP1-206ENST00000553569 H3BM21 787 aa22.76■■□□□ 1.23
TDP1-206ENST00000553569 METTL18O95568 372 aa22.76■■□□□ 1.23
TDP1-206ENST00000553569 EPOP01588 193 aa22.76■■□□□ 1.23
TDP1-206ENST00000553569 CSF2P04141 144 aa22.76■■□□□ 1.23
TDP1-206ENST00000553569 NME1P15531 152 aaKnown RBP22.76■■□□□ 1.23
TDP1-206ENST00000553569 JUNDP17535 347 aa22.76■■□□□ 1.23
TDP1-206ENST00000553569 GRK6P43250 576 aa22.76■■□□□ 1.23
TDP1-206ENST00000553569 GPR1P46091 355 aa22.76■■□□□ 1.23
TDP1-206ENST00000553569 KIAA1024LP59773 190 aa22.76■■□□□ 1.23
TDP1-206ENST00000553569 CCNG2Q16589 344 aa22.76■■□□□ 1.23
TDP1-206ENST00000553569 NYAP1Q6ZVC0 841 aa22.76■■□□□ 1.23
TDP1-206ENST00000553569 RBFAQ8N0V3 343 aa22.76■■□□□ 1.23
TDP1-206ENST00000553569 MS4A14Q96JA4 679 aa22.76■■□□□ 1.23
TDP1-206ENST00000553569 WDR92Q96MX6 357 aa22.76■■□□□ 1.23
TDP1-206ENST00000553569 PPP1R2P1Q96PQ5 205 aa22.76■■□□□ 1.23
TDP1-206ENST00000553569 UCKL1Q9NWZ5 548 aa22.76■■□□□ 1.23
TDP1-206ENST00000553569 KLF15Q9UIH9 416 aa22.76■■□□□ 1.23
TDP1-206ENST00000553569 PCOLCE2Q9UKZ9 415 aa22.76■■□□□ 1.23
TDP1-206ENST00000553569 PNMA8BQ9ULN7 279 aaPredicted RBP22.76■■□□□ 1.23
TDP1-206ENST00000553569 LRP4O75096 1905 aa22.76■■□□□ 1.23
TDP1-206ENST00000553569 PIAS2O75928 621 aa22.75■■□□□ 1.23
TDP1-206ENST00000553569 FGF1P05230 155 aa22.75■■□□□ 1.23
TDP1-206ENST00000553569 SPINT3P49223 89 aa22.75■■□□□ 1.23
TDP1-206ENST00000553569 HNRNPKP61978 463 aaKnown RBP eCLIP22.75■■□□□ 1.23
TDP1-206ENST00000553569 SPARCL1Q14515 664 aa22.75■■□□□ 1.23
TDP1-206ENST00000553569 PARP6Q2NL67 630 aa22.75■■□□□ 1.23
TDP1-206ENST00000553569 P3H1Q32P28 736 aa22.75■■□□□ 1.23
TDP1-206ENST00000553569 ALS2CLQ60I27 953 aa22.75■■□□□ 1.23
TDP1-206ENST00000553569 DBX2Q6ZNG2 339 aa22.75■■□□□ 1.23
TDP1-206ENST00000553569 ZNF765Q7L2R6 523 aa22.75■■□□□ 1.23
TDP1-206ENST00000553569 KANSL1Q7Z3B3 1105 aa22.75■■□□□ 1.23
TDP1-206ENST00000553569 PRUNE1Q86TP1 453 aa22.75■■□□□ 1.23
TDP1-206ENST00000553569 PHACTR4Q8IZ21 702 aa22.75■■□□□ 1.23
TDP1-206ENST00000553569 NRSN1Q8IZ57 195 aa22.75■■□□□ 1.23
TDP1-206ENST00000553569 BLOC1S5Q8TDH9 187 aa22.75■■□□□ 1.23
TDP1-206ENST00000553569 EID2BQ96D98 161 aa22.75■■□□□ 1.23
TDP1-206ENST00000553569 RTP4Q96DX8 246 aa22.75■■□□□ 1.23
TDP1-206ENST00000553569 OSBPL9Q96SU4 736 aa22.75■■□□□ 1.23
TDP1-206ENST00000553569 RIOK2Q9BVS4 552 aaKnown RBP22.75■■□□□ 1.23
TDP1-206ENST00000553569 LGR4Q9BXB1 951 aa22.75■■□□□ 1.23
TDP1-206ENST00000553569 TCEAL2Q9H3H9 227 aaPredicted RBP22.75■■□□□ 1.23
TDP1-206ENST00000553569 PHPT1Q9NRX4 125 aaPredicted RBP22.75■■□□□ 1.23
TDP1-206ENST00000553569 KLQ9UEF7 1012 aa22.75■■□□□ 1.23
TDP1-206ENST00000553569 APOBEC3BQ9UH17 382 aaKnown RBP22.75■■□□□ 1.23
TDP1-206ENST00000553569 ZKSCAN5Q9Y2L8 839 aa22.75■■□□□ 1.23
TDP1-206ENST00000553569 SCN8AQ9UQD0 1980 aa22.75■■□□□ 1.23
TDP1-206ENST00000553569 DCHS1Q96JQ0 3298 aa22.75■■□□□ 1.23
TDP1-206ENST00000553569 SPAARA0A1B0GVQ0 90 aa22.74■■□□□ 1.23
TDP1-206ENST00000553569 AURKAO14965 403 aa22.74■■□□□ 1.23
TDP1-206ENST00000553569 FFAR2O15552 330 aa22.74■■□□□ 1.23
TDP1-206ENST00000553569 USP12O75317 370 aa22.74■■□□□ 1.23
TDP1-206ENST00000553569 CEACAM1P13688 526 aa22.74■■□□□ 1.23
TDP1-206ENST00000553569 DGKAP23743 735 aa22.74■■□□□ 1.23
TDP1-206ENST00000553569 STIP1P31948 543 aaKnown RBP22.74■■□□□ 1.23
TDP1-206ENST00000553569 TRIM23P36406 574 aa22.74■■□□□ 1.23
TDP1-206ENST00000553569 GNG11P61952 73 aa22.74■■□□□ 1.23
TDP1-206ENST00000553569 PPARDQ03181 441 aa22.74■■□□□ 1.23
TDP1-206ENST00000553569 DPTQ07507 201 aa22.74■■□□□ 1.23
TDP1-206ENST00000553569 ALG11Q2TAA5 492 aa22.74■■□□□ 1.23
TDP1-206ENST00000553569 HID1Q8IV36 788 aa22.74■■□□□ 1.23
TDP1-206ENST00000553569 RASGEF1CQ8N431 466 aa22.74■■□□□ 1.23
TDP1-206ENST00000553569 EID2Q8N6I1 236 aa22.74■■□□□ 1.23
TDP1-206ENST00000553569 CCDC89Q8N998 374 aa22.74■■□□□ 1.23
TDP1-206ENST00000553569 ATL2Q8NHH9 583 aa22.74■■□□□ 1.23
TDP1-206ENST00000553569 COG1Q8WTW3 980 aa22.74■■□□□ 1.23
TDP1-206ENST00000553569 TSACCQ96A04 125 aaPredicted RBP22.74■■□□□ 1.23
TDP1-206ENST00000553569 SRPK1Q96SB4 655 aaKnown RBP22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms