RNA–Protein interactions for RNA: ENST00000552812.1

CACNB3-224, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

Gene CACNB3, Length 1,712 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-224ENST00000552812 HHATQ5VTY9 493 aa11.27□□□□□ -0.61
CACNB3-224ENST00000552812 LVRNQ6Q4G3 990 aa11.27□□□□□ -0.61
CACNB3-224ENST00000552812 KYAT3Q6YP21 454 aaKnown RBP11.27□□□□□ -0.61
CACNB3-224ENST00000552812 NUDT18Q6ZVK8 323 aa11.27□□□□□ -0.61
CACNB3-224ENST00000552812 LYSMD3Q7Z3D4 306 aa11.27□□□□□ -0.61
CACNB3-224ENST00000552812 ZSWIM9Q86XI8 627 aa11.27□□□□□ -0.61
CACNB3-224ENST00000552812 CHST14Q8NCH0 376 aa11.27□□□□□ -0.61
CACNB3-224ENST00000552812 ST13P5Q8NFI4 369 aaPredicted RBP11.27□□□□□ -0.61
CACNB3-224ENST00000552812 NXPE3Q969Y0 559 aa11.27□□□□□ -0.61
CACNB3-224ENST00000552812 CHMP6Q96FZ7 201 aa11.27□□□□□ -0.61
CACNB3-224ENST00000552812 MAGEB18Q96M61 343 aa11.27□□□□□ -0.61
CACNB3-224ENST00000552812 ZNF317Q96PQ6 595 aaPredicted RBP11.27□□□□□ -0.61
CACNB3-224ENST00000552812 SMIM14Q96QK8 99 aa11.27□□□□□ -0.61
CACNB3-224ENST00000552812 MCCC1Q96RQ3 725 aaPredicted RBP11.27□□□□□ -0.61
CACNB3-224ENST00000552812 TCF12Q99081 682 aa11.27□□□□□ -0.61
CACNB3-224ENST00000552812 SLC13A1Q9BZW2 595 aa11.27□□□□□ -0.61
CACNB3-224ENST00000552812 VPS11Q9H270 941 aa11.27□□□□□ -0.61
CACNB3-224ENST00000552812 SUDS3Q9H7L9 328 aaPredicted RBP11.27□□□□□ -0.61
CACNB3-224ENST00000552812 MLXIPLQ9NP71 852 aa11.27□□□□□ -0.61
CACNB3-224ENST00000552812 INTS10Q9NVR2 710 aaKnown RBP11.27□□□□□ -0.61
CACNB3-224ENST00000552812 GRID1Q9ULK0 1009 aa11.27□□□□□ -0.61
CACNB3-224ENST00000552812 USP15Q9Y4E8 981 aaPredicted RBP11.27□□□□□ -0.61
CACNB3-224ENST00000552812 WASF2Q9Y6W5 498 aa11.27□□□□□ -0.61
CACNB3-224ENST00000552812 C1orf232A0A0U1RR37 186 aa11.26□□□□□ -0.61
CACNB3-224ENST00000552812 FAM95CA0A1B0GW59 222 aa11.26□□□□□ -0.61
CACNB3-224ENST00000552812 CCL22O00626 93 aa11.26□□□□□ -0.61
CACNB3-224ENST00000552812 HAUS5O94927 633 aa11.26□□□□□ -0.61
CACNB3-224ENST00000552812 S1PR4O95977 384 aa11.26□□□□□ -0.61
CACNB3-224ENST00000552812 ALPIP09923 528 aa11.26□□□□□ -0.61
CACNB3-224ENST00000552812 NFKBIAP25963 317 aa11.26□□□□□ -0.61
CACNB3-224ENST00000552812 HNF1BP35680 557 aa11.26□□□□□ -0.61
CACNB3-224ENST00000552812 STC1P52823 247 aa11.26□□□□□ -0.61
CACNB3-224ENST00000552812 KDSRQ06136 332 aa11.26□□□□□ -0.61
CACNB3-224ENST00000552812 MESP2Q0VG99 397 aa11.26□□□□□ -0.61
CACNB3-224ENST00000552812 HTR4Q13639 388 aa11.26□□□□□ -0.61
CACNB3-224ENST00000552812 USP10Q14694 798 aaKnown RBP11.26□□□□□ -0.61
CACNB3-224ENST00000552812 E2F5Q15329 346 aa11.26□□□□□ -0.61
CACNB3-224ENST00000552812 HNRNPA1L2Q32P51 320 aaKnown RBP11.26□□□□□ -0.61
CACNB3-224ENST00000552812 FASTKD1Q53R41 847 aaKnown RBP11.26□□□□□ -0.61
CACNB3-224ENST00000552812 RGS9BPQ6ZS82 235 aa11.26□□□□□ -0.61
CACNB3-224ENST00000552812 CDHR3Q6ZTQ4 885 aa11.26□□□□□ -0.61
CACNB3-224ENST00000552812 TPRG1Q6ZUI0 275 aa11.26□□□□□ -0.61
CACNB3-224ENST00000552812 CCDC91Q7Z6B0 441 aa11.26□□□□□ -0.61
CACNB3-224ENST00000552812 TAX1BP1Q86VP1 789 aa11.26□□□□□ -0.61
CACNB3-224ENST00000552812 SUGP1Q8IWZ8 645 aaKnown RBP11.26□□□□□ -0.61
CACNB3-224ENST00000552812 GDAP1Q8TB36 358 aa11.26□□□□□ -0.61
CACNB3-224ENST00000552812 MYLIPQ8WY64 445 aa11.26□□□□□ -0.61
CACNB3-224ENST00000552812 GAS2L1Q99501 681 aaPredicted RBP11.26□□□□□ -0.61
CACNB3-224ENST00000552812 FBXO6Q9NRD1 293 aaPredicted RBP11.26□□□□□ -0.61
CACNB3-224ENST00000552812 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.26□□□□□ -0.61
CACNB3-224ENST00000552812 MARCH4Q9P2E8 410 aaPredicted RBP11.26□□□□□ -0.61
CACNB3-224ENST00000552812 SLC17A7Q9P2U7 560 aa11.26□□□□□ -0.61
CACNB3-224ENST00000552812 DKK3Q9UBP4 350 aa11.26□□□□□ -0.61
CACNB3-224ENST00000552812 IL36AQ9UHA7 158 aa11.26□□□□□ -0.61
CACNB3-224ENST00000552812 SLC39A10Q9ULF5 831 aa11.26□□□□□ -0.61
CACNB3-224ENST00000552812 ANKRD6Q9Y2G4 727 aa11.26□□□□□ -0.61
CACNB3-224ENST00000552812 NUMBLQ9Y6R0 609 aa11.26□□□□□ -0.61
CACNB3-224ENST00000552812 BPTFQ12830 3046 aa11.26□□□□□ -0.61
CACNB3-224ENST00000552812 A0A096LPK6 155 aa11.26□□□□□ -0.61
CACNB3-224ENST00000552812 EDDM13A0A1B0GTR0 161 aa11.26□□□□□ -0.61
CACNB3-224ENST00000552812 TBC1D3BA6NDS4 549 aa11.26□□□□□ -0.61
CACNB3-224ENST00000552812 OR51F1A6NGY5 319 aa11.26□□□□□ -0.61
CACNB3-224ENST00000552812 PFDN6O15212 129 aa11.26□□□□□ -0.61
CACNB3-224ENST00000552812 LEFTY1O75610 366 aa11.26□□□□□ -0.61
CACNB3-224ENST00000552812 KAT7O95251 611 aa11.26□□□□□ -0.61
CACNB3-224ENST00000552812 FAM107AO95990 144 aa11.26□□□□□ -0.61
CACNB3-224ENST00000552812 SLC4A1P02730 911 aa11.26□□□□□ -0.61
CACNB3-224ENST00000552812 C2P06681 752 aa11.26□□□□□ -0.61
CACNB3-224ENST00000552812 COL6A2P12110 1019 aa11.26□□□□□ -0.61
CACNB3-224ENST00000552812 STMN1P16949 149 aa11.26□□□□□ -0.61
CACNB3-224ENST00000552812 CRABP2P29373 138 aa11.26□□□□□ -0.61
CACNB3-224ENST00000552812 PMLP29590 882 aa11.26□□□□□ -0.61
CACNB3-224ENST00000552812 FOXN2P32314 431 aa11.26□□□□□ -0.61
CACNB3-224ENST00000552812 GRIA2P42262 883 aa11.26□□□□□ -0.61
CACNB3-224ENST00000552812 PRSS12P56730 875 aa11.26□□□□□ -0.61
CACNB3-224ENST00000552812 RAB10P61026 200 aa11.26□□□□□ -0.61
CACNB3-224ENST00000552812 ZKSCAN8Q15776 578 aaPredicted RBP11.26□□□□□ -0.61
CACNB3-224ENST00000552812 PDK4Q16654 411 aa11.26□□□□□ -0.61
CACNB3-224ENST00000552812 FNDC3BQ53EP0 1204 aaKnown RBP11.26□□□□□ -0.61
CACNB3-224ENST00000552812 TAF1BQ53T94 588 aaPredicted RBP11.26□□□□□ -0.61
CACNB3-224ENST00000552812 AARS2Q5JTZ9 985 aaKnown RBP11.26□□□□□ -0.61
CACNB3-224ENST00000552812 RNF187Q5TA31 235 aaPredicted RBP11.26□□□□□ -0.61
CACNB3-224ENST00000552812 CNSTQ6PJW8 725 aa11.26□□□□□ -0.61
CACNB3-224ENST00000552812 CMC1Q7Z7K0 106 aa11.26□□□□□ -0.61
CACNB3-224ENST00000552812 CBARPQ8N350 705 aaPredicted RBP11.26□□□□□ -0.61
CACNB3-224ENST00000552812 MICALL1Q8N3F8 863 aa11.26□□□□□ -0.61
CACNB3-224ENST00000552812 GRIN3AQ8TCU5 1115 aa11.26□□□□□ -0.61
CACNB3-224ENST00000552812 EID2BQ96D98 161 aa11.26□□□□□ -0.61
CACNB3-224ENST00000552812 TSPAN17Q96FV3 270 aa11.26□□□□□ -0.61
CACNB3-224ENST00000552812 KLHL32Q96NJ5 620 aa11.26□□□□□ -0.61
CACNB3-224ENST00000552812 FAM111AQ96PZ2 611 aa11.26□□□□□ -0.61
CACNB3-224ENST00000552812 PAIP2Q9BPZ3 127 aaKnown RBP11.26□□□□□ -0.61
CACNB3-224ENST00000552812 RPP25Q9BUL9 199 aaKnown RBP11.26□□□□□ -0.61
CACNB3-224ENST00000552812 TMEM245Q9H330 911 aa11.26□□□□□ -0.61
CACNB3-224ENST00000552812 BRD9Q9H8M2 597 aa11.26□□□□□ -0.61
CACNB3-224ENST00000552812 FKBPLQ9UIM3 349 aa11.26□□□□□ -0.61
CACNB3-224ENST00000552812 APPL1Q9UKG1 709 aa11.26□□□□□ -0.61
CACNB3-224ENST00000552812 ZNF106Q9H2Y7 1883 aaKnown RBP11.25□□□□□ -0.61
CACNB3-224ENST00000552812 NPIPB15A6NHN6 443 aaPredicted RBP11.25□□□□□ -0.61
CACNB3-224ENST00000552812 PRNPP04156 253 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms