RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 SELENOOQ9BVL4 669 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 DPH1Q9BZG8 443 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 MAGEH1Q9H213 219 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 DPEP2Q9H4A9 486 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 SUV39H2Q9H5I1 410 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 CLMPQ9H6B4 373 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 BRD7Q9NPI1 651 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 ETNK2Q9NVF9 386 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 FANCLQ9NW38 375 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 GOLGA6AQ9NYA3 693 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 RRN3Q9NYV6 651 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 ADAM22Q9P0K1 906 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 LRIT1Q9P2V4 623 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 CD84Q9UIB8 345 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 FZD10Q9ULW2 581 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 HPCAL4Q9UM19 191 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 TMEM98Q9Y2Y6 226 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 PRKAB1Q9Y478 270 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 PCDHGA8Q9Y5G5 932 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 PCYT1BQ9Y5K3 369 aaPredicted RBP6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 LRP4O75096 1905 aa6.87□□□□□ -1.31
PRPF40B-214ENST00000551320 CENPEQ02224 2701 aa6.86□□□□□ -1.31
PRPF40B-214ENST00000551320 USP9XQ93008 2570 aaPredicted RBP6.86□□□□□ -1.31
PRPF40B-214ENST00000551320 A8MU76 341 aa6.86□□□□□ -1.31
PRPF40B-214ENST00000551320 MAP3K6O95382 1288 aa6.86□□□□□ -1.31
PRPF40B-214ENST00000551320 WISP1O95388 367 aa6.86□□□□□ -1.31
PRPF40B-214ENST00000551320 LSM8O95777 96 aaKnown RBP6.86□□□□□ -1.31
PRPF40B-214ENST00000551320 EML2O95834 649 aa6.86□□□□□ -1.31
PRPF40B-214ENST00000551320 IGSF6O95976 241 aa6.86□□□□□ -1.31
PRPF40B-214ENST00000551320 ITGA2BP08514 1039 aa6.86□□□□□ -1.31
PRPF40B-214ENST00000551320 JMJD7P0C870 316 aa6.86□□□□□ -1.31
PRPF40B-214ENST00000551320 FAM157BP0CG42 384 aa6.86□□□□□ -1.31
PRPF40B-214ENST00000551320 UNGP13051 313 aaPredicted RBP6.86□□□□□ -1.31
PRPF40B-214ENST00000551320 CTPS1P17812 591 aa6.86□□□□□ -1.31
PRPF40B-214ENST00000551320 MAPK1P28482 360 aa6.86□□□□□ -1.31
PRPF40B-214ENST00000551320 MMP12P39900 470 aa6.86□□□□□ -1.31
PRPF40B-214ENST00000551320 PTPN9P43378 593 aa6.86□□□□□ -1.31
PRPF40B-214ENST00000551320 MAPKAPK2P49137 400 aa6.86□□□□□ -1.31
PRPF40B-214ENST00000551320 SCNN1BP51168 640 aa6.86□□□□□ -1.31
PRPF40B-214ENST00000551320 JAM2P57087 298 aa6.86□□□□□ -1.31
PRPF40B-214ENST00000551320 SNX16P57768 344 aa6.86□□□□□ -1.31
PRPF40B-214ENST00000551320 MAXP61244 160 aa6.86□□□□□ -1.31
PRPF40B-214ENST00000551320 UBE2HP62256 183 aa6.86□□□□□ -1.31
PRPF40B-214ENST00000551320 PTK2BQ14289 1009 aa6.86□□□□□ -1.31
PRPF40B-214ENST00000551320 ACOX1Q15067 660 aa6.86□□□□□ -1.31
PRPF40B-214ENST00000551320 UGP2Q16851 508 aa6.86□□□□□ -1.31
PRPF40B-214ENST00000551320 SPECC1LQ69YQ0 1117 aa6.86□□□□□ -1.31
PRPF40B-214ENST00000551320 SLC30A9Q6PML9 568 aa6.86□□□□□ -1.31
PRPF40B-214ENST00000551320 LIPIQ6XZB0 460 aa6.86□□□□□ -1.31
PRPF40B-214ENST00000551320 ZNF783Q6ZMS7 281 aa6.86□□□□□ -1.31
PRPF40B-214ENST00000551320 MARK2Q7KZI7 788 aaKnown RBP6.86□□□□□ -1.31
PRPF40B-214ENST00000551320 HSD11B1LQ7Z5J1 315 aa6.86□□□□□ -1.31
PRPF40B-214ENST00000551320 SPRED1Q7Z699 444 aa6.86□□□□□ -1.31
PRPF40B-214ENST00000551320 SRLQ86TD4 932 aa6.86□□□□□ -1.31
PRPF40B-214ENST00000551320 TSPAN33Q86UF1 283 aa6.86□□□□□ -1.31
PRPF40B-214ENST00000551320 CPNE8Q86YQ8 564 aa6.86□□□□□ -1.31
PRPF40B-214ENST00000551320 VWA5B2Q8N398 1253 aa6.86□□□□□ -1.31
PRPF40B-214ENST00000551320 GPR156Q8NFN8 814 aa6.86□□□□□ -1.31
PRPF40B-214ENST00000551320 BTN2A2Q8WVV5 523 aa6.86□□□□□ -1.31
PRPF40B-214ENST00000551320 RAB7BQ96AH8 199 aa6.86□□□□□ -1.31
PRPF40B-214ENST00000551320 CTRCQ99895 268 aa6.86□□□□□ -1.31
PRPF40B-214ENST00000551320 DHX35Q9H5Z1 703 aaKnown RBP6.86□□□□□ -1.31
PRPF40B-214ENST00000551320 LRRC19Q9H756 370 aa6.86□□□□□ -1.31
PRPF40B-214ENST00000551320 PDFQ9HBH1 243 aa6.86□□□□□ -1.31
PRPF40B-214ENST00000551320 ARFGAP3Q9NP61 516 aa6.86□□□□□ -1.31
PRPF40B-214ENST00000551320 UBA2Q9UBT2 640 aaPredicted RBP6.86□□□□□ -1.31
PRPF40B-214ENST00000551320 SIK3Q9Y2K2 1263 aa6.86□□□□□ -1.31
PRPF40B-214ENST00000551320 PAXBP1Q9Y5B6 917 aa6.86□□□□□ -1.31
PRPF40B-214ENST00000551320 SDK2Q58EX2 2172 aa6.86□□□□□ -1.31
PRPF40B-214ENST00000551320 SCN8AQ9UQD0 1980 aa6.86□□□□□ -1.31
PRPF40B-214ENST00000551320 TCRBV5S1A1TA0A578 114 aa6.85□□□□□ -1.31
PRPF40B-214ENST00000551320 NDUFB5O43674 189 aa6.85□□□□□ -1.31
PRPF40B-214ENST00000551320 DUX1O43812 170 aa6.85□□□□□ -1.31
PRPF40B-214ENST00000551320 PRAMEF11O60813 436 aa6.85□□□□□ -1.31
PRPF40B-214ENST00000551320 TCEA3O75764 348 aa6.85□□□□□ -1.31
PRPF40B-214ENST00000551320 ECEL1O95672 775 aa6.85□□□□□ -1.31
PRPF40B-214ENST00000551320 TNFP01375 233 aa6.85□□□□□ -1.31
PRPF40B-214ENST00000551320 FGF1P05230 155 aa6.85□□□□□ -1.31
PRPF40B-214ENST00000551320 ALPIP09923 528 aa6.85□□□□□ -1.31
PRPF40B-214ENST00000551320 PRKAR1AP10644 381 aa6.85□□□□□ -1.31
PRPF40B-214ENST00000551320 FGF3P11487 239 aaPredicted RBP6.85□□□□□ -1.31
PRPF40B-214ENST00000551320 NR1D1P20393 614 aa6.85□□□□□ -1.31
PRPF40B-214ENST00000551320 ETV3P41162 512 aa6.85□□□□□ -1.31
PRPF40B-214ENST00000551320 NSFP46459 744 aaKnown RBP6.85□□□□□ -1.31
PRPF40B-214ENST00000551320 GNPDA1P46926 289 aa6.85□□□□□ -1.31
PRPF40B-214ENST00000551320 PPM1FP49593 454 aaPredicted RBP6.85□□□□□ -1.31
PRPF40B-214ENST00000551320 UCNP55089 124 aa6.85□□□□□ -1.31
PRPF40B-214ENST00000551320 TPI1P60174 286 aa6.85□□□□□ -1.31
PRPF40B-214ENST00000551320 YPEL5P62699 121 aa6.85□□□□□ -1.31
PRPF40B-214ENST00000551320 B4GALNT1Q00973 533 aa6.85□□□□□ -1.31
PRPF40B-214ENST00000551320 SLC10A7Q0GE19 358 aa6.85□□□□□ -1.31
PRPF40B-214ENST00000551320 IHHQ14623 411 aa6.85□□□□□ -1.31
PRPF40B-214ENST00000551320 ELOCQ15369 112 aa6.85□□□□□ -1.31
PRPF40B-214ENST00000551320 MAP9Q49MG5 647 aa6.85□□□□□ -1.31
PRPF40B-214ENST00000551320 PPP6R3Q5H9R7 873 aaPredicted RBP6.85□□□□□ -1.31
PRPF40B-214ENST00000551320 MANEAQ5SRI9 462 aa6.85□□□□□ -1.31
PRPF40B-214ENST00000551320 ZNF648Q5T619 568 aaPredicted RBP6.85□□□□□ -1.31
PRPF40B-214ENST00000551320 E4F1Q66K89 784 aaPredicted RBP6.85□□□□□ -1.31
PRPF40B-214ENST00000551320 TXNRD3NBQ6F5E7 133 aa6.85□□□□□ -1.31
PRPF40B-214ENST00000551320 DNAJC24Q6P3W2 148 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms