RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 CDR2LQ86X02 465 aaPredicted RBP5.31□□□□□ -1.56
LSM3P2-201ENST00000551246 ZDHHC13Q8IUH4 622 aa5.31□□□□□ -1.56
LSM3P2-201ENST00000551246 HID1Q8IV36 788 aa5.31□□□□□ -1.56
LSM3P2-201ENST00000551246 TMEM151BQ8IW70 566 aa5.31□□□□□ -1.56
LSM3P2-201ENST00000551246 TBC1D21Q8IYX1 336 aa5.31□□□□□ -1.56
LSM3P2-201ENST00000551246 LINC00518Q8N0U6 118 aa5.31□□□□□ -1.56
LSM3P2-201ENST00000551246 ZNF786Q8N393 782 aa5.31□□□□□ -1.56
LSM3P2-201ENST00000551246 ZCCHC7Q8N3Z6 543 aaKnown RBP5.31□□□□□ -1.56
LSM3P2-201ENST00000551246 KCT2Q8NC54 265 aa5.31□□□□□ -1.56
LSM3P2-201ENST00000551246 LEMD2Q8NC56 503 aa5.31□□□□□ -1.56
LSM3P2-201ENST00000551246 VPS37AQ8NEZ2 397 aa5.31□□□□□ -1.56
LSM3P2-201ENST00000551246 BEST2Q8NFU1 509 aa5.31□□□□□ -1.56
LSM3P2-201ENST00000551246 TTLQ8NG68 377 aa5.31□□□□□ -1.56
LSM3P2-201ENST00000551246 OR7D4Q8NG98 312 aa5.31□□□□□ -1.56
LSM3P2-201ENST00000551246 SDR42E1Q8WUS8 393 aa5.31□□□□□ -1.56
LSM3P2-201ENST00000551246 CRYGNQ8WXF5 182 aa5.31□□□□□ -1.56
LSM3P2-201ENST00000551246 HERVK_113Q902F9 699 aa5.31□□□□□ -1.56
LSM3P2-201ENST00000551246 DHX38Q92620 1227 aaKnown RBP5.31□□□□□ -1.56
LSM3P2-201ENST00000551246 GPRASP2Q96D09 838 aa5.31□□□□□ -1.56
LSM3P2-201ENST00000551246 CFAP36Q96G28 342 aa5.31□□□□□ -1.56
LSM3P2-201ENST00000551246 PDXPQ96GD0 296 aa5.31□□□□□ -1.56
LSM3P2-201ENST00000551246 VCPIP1Q96JH7 1222 aa5.31□□□□□ -1.56
LSM3P2-201ENST00000551246 CEP170P1Q96L14 293 aa5.31□□□□□ -1.56
LSM3P2-201ENST00000551246 HSFY1Q96LI6 401 aa5.31□□□□□ -1.56
LSM3P2-201ENST00000551246 MFSD14AQ96MC6 490 aa5.31□□□□□ -1.56
LSM3P2-201ENST00000551246 ZNF300Q96RE9 604 aaPredicted RBP5.31□□□□□ -1.56
LSM3P2-201ENST00000551246 TM9SF2Q99805 663 aa5.31□□□□□ -1.56
LSM3P2-201ENST00000551246 COQ7Q99807 217 aa5.31□□□□□ -1.56
LSM3P2-201ENST00000551246 SH2D3AQ9BRG2 576 aa5.31□□□□□ -1.56
LSM3P2-201ENST00000551246 TMEM246Q9BRR3 403 aa5.31□□□□□ -1.56
LSM3P2-201ENST00000551246 TINF2Q9BSI4 451 aa5.31□□□□□ -1.56
LSM3P2-201ENST00000551246 APOL6Q9BWW8 343 aa5.31□□□□□ -1.56
LSM3P2-201ENST00000551246 FTHL17Q9BXU8 183 aa5.31□□□□□ -1.56
LSM3P2-201ENST00000551246 ALOXE3Q9BYJ1 711 aa5.31□□□□□ -1.56
LSM3P2-201ENST00000551246 SLIRPQ9GZT3 109 aaKnown RBP5.31□□□□□ -1.56
LSM3P2-201ENST00000551246 GREM2Q9H772 168 aa5.31□□□□□ -1.56
LSM3P2-201ENST00000551246 EHMT1Q9H9B1 1298 aa5.31□□□□□ -1.56
LSM3P2-201ENST00000551246 IFT122Q9HBG6 1241 aa5.31□□□□□ -1.56
LSM3P2-201ENST00000551246 POPDC2Q9HBU9 364 aa5.31□□□□□ -1.56
LSM3P2-201ENST00000551246 ZFP14Q9HCL3 533 aa5.31□□□□□ -1.56
LSM3P2-201ENST00000551246 TIGARQ9NQ88 270 aa5.31□□□□□ -1.56
LSM3P2-201ENST00000551246 NECTIN3Q9NQS3 549 aa5.31□□□□□ -1.56
LSM3P2-201ENST00000551246 SMYD2Q9NRG4 433 aa5.31□□□□□ -1.56
LSM3P2-201ENST00000551246 AGPAT4Q9NRZ5 378 aa5.31□□□□□ -1.56
LSM3P2-201ENST00000551246 FBXL12Q9NXK8 326 aa5.31□□□□□ -1.56
LSM3P2-201ENST00000551246 B3GNT2Q9NY97 397 aa5.31□□□□□ -1.56
LSM3P2-201ENST00000551246 REV1Q9UBZ9 1251 aa5.31□□□□□ -1.56
LSM3P2-201ENST00000551246 MARCOQ9UEW3 520 aaPredicted RBP5.31□□□□□ -1.56
LSM3P2-201ENST00000551246 CHORDC1Q9UHD1 332 aaPredicted RBP5.31□□□□□ -1.56
LSM3P2-201ENST00000551246 GTF2IRD1Q9UHL9 959 aa5.31□□□□□ -1.56
LSM3P2-201ENST00000551246 CPSF3Q9UKF6 684 aaKnown RBP5.31□□□□□ -1.56
LSM3P2-201ENST00000551246 GRIP1Q9Y3R0 1128 aa5.31□□□□□ -1.56
LSM3P2-201ENST00000551246 TBX22Q9Y458 520 aa5.31□□□□□ -1.56
LSM3P2-201ENST00000551246 PCDHGA7Q9Y5G6 932 aa5.31□□□□□ -1.56
LSM3P2-201ENST00000551246 KIAA1551Q9HCM1 1747 aa5.31□□□□□ -1.56
LSM3P2-201ENST00000551246 CNTNAP1P78357 1384 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 SCN4AP35499 1836 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 UBR2Q8IWV8 1755 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 LOC100653049A0A140TA62 436 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 TCRBV7S3A2A0A539 114 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 CLRN2A0PK11 232 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 SAC3D1A6NKF1 404 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 AQP12BA6NM10 295 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 CXorf49A8MYA2 514 aaPredicted RBP5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 PDPK1O15530 556 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 SYNCRIPO60506 623 aaKnown RBP5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 NOL3O60936 208 aaKnown RBP5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 LYPLA1O75608 230 aaPredicted RBP5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 ZMPSTE24O75844 475 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 KRT34O76011 436 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 FGF18O76093 207 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 VAPBO95292 243 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 INHBAP08476 426 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 PCNAP12004 261 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 ZNF30P17039 623 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 CYP2A7P20853 494 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 CHMP24386 653 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 CRHBPP24387 322 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 CNTFP26441 200 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 HTR1BP28222 390 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 RFC4P35249 363 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 PTGS2P35354 604 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 ELK3P41970 407 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 CDKN2BP42772 138 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 GNPDA1P46926 289 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 POLD2P49005 469 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 LIMK1P53667 647 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 GP2P55259 537 aaKnown RBP5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 CTSWP56202 376 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 ABCE1P61221 599 aaKnown RBP5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 PSME3P61289 254 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 BNIP2Q12982 314 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 FADDQ13158 208 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 SEMA3BQ13214 749 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 MAMLD1Q13495 774 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 LAPTM5Q13571 262 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 GPR50Q13585 617 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 PEX6Q13608 980 aa5.3□□□□□ -1.56
LSM3P2-201ENST00000551246 ACAP2Q15057 778 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms