RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 CPP00450 1065 aa12.84□□□□□ -0.35
PTCH1-221ENST00000550914 IVLP07476 585 aa12.84□□□□□ -0.35
PTCH1-221ENST00000550914 CSRP3P50461 194 aa12.84□□□□□ -0.35
PTCH1-221ENST00000550914 MAPK10P53779 464 aa12.84□□□□□ -0.35
PTCH1-221ENST00000550914 OR1D5P58170 312 aa12.84□□□□□ -0.35
PTCH1-221ENST00000550914 CDK3Q00526 305 aa12.84□□□□□ -0.35
PTCH1-221ENST00000550914 DPTQ07507 201 aa12.84□□□□□ -0.35
PTCH1-221ENST00000550914 NFATC3Q12968 1075 aa12.84□□□□□ -0.35
PTCH1-221ENST00000550914 C16orf72Q14CZ0 275 aa12.84□□□□□ -0.35
PTCH1-221ENST00000550914 NCAPHQ15003 741 aa12.84□□□□□ -0.35
PTCH1-221ENST00000550914 DPYSL2Q16555 572 aa12.84□□□□□ -0.35
PTCH1-221ENST00000550914 BOLA3Q53S33 107 aa12.84□□□□□ -0.35
PTCH1-221ENST00000550914 PRICKLE2Q7Z3G6 844 aa12.84□□□□□ -0.35
PTCH1-221ENST00000550914 ZFAND4Q86XD8 727 aa12.84□□□□□ -0.35
PTCH1-221ENST00000550914 BBS5Q8N3I7 341 aa12.84□□□□□ -0.35
PTCH1-221ENST00000550914 EXTL1Q92935 676 aa12.84□□□□□ -0.35
PTCH1-221ENST00000550914 TRIM11Q96F44 468 aa12.84□□□□□ -0.35
PTCH1-221ENST00000550914 SCRN2Q96FV2 425 aa12.84□□□□□ -0.35
PTCH1-221ENST00000550914 SCARF2Q96GP6 870 aaPredicted RBP12.84□□□□□ -0.35
PTCH1-221ENST00000550914 MCCC1Q96RQ3 725 aaPredicted RBP12.84□□□□□ -0.35
PTCH1-221ENST00000550914 MGME1Q9BQP7 344 aa12.84□□□□□ -0.35
PTCH1-221ENST00000550914 HSD3B7Q9H2F3 369 aa12.84□□□□□ -0.35
PTCH1-221ENST00000550914 RDH14Q9HBH5 336 aa12.84□□□□□ -0.35
PTCH1-221ENST00000550914 SLC17A4Q9Y2C5 497 aa12.84□□□□□ -0.35
PTCH1-221ENST00000550914 PPIL1Q9Y3C6 166 aa12.84□□□□□ -0.35
PTCH1-221ENST00000550914 PCDHGC4Q9Y5F7 938 aa12.84□□□□□ -0.35
PTCH1-221ENST00000550914 PCDHGA3Q9Y5H0 932 aa12.84□□□□□ -0.35
PTCH1-221ENST00000550914 IGHV5-10-1A0A0J9YXX1 117 aa12.83□□□□□ -0.36
PTCH1-221ENST00000550914 TMCO5BA8MYB1 307 aa12.83□□□□□ -0.36
PTCH1-221ENST00000550914 H3BRJ5 948 aa12.83□□□□□ -0.36
PTCH1-221ENST00000550914 ECEL1O95672 775 aa12.83□□□□□ -0.36
PTCH1-221ENST00000550914 FTLP02792 175 aaPredicted RBP12.83□□□□□ -0.36
PTCH1-221ENST00000550914 FUCA1P04066 466 aa12.83□□□□□ -0.36
PTCH1-221ENST00000550914 MYBL1P10243 752 aa12.83□□□□□ -0.36
PTCH1-221ENST00000550914 KRT10P13645 584 aa12.83□□□□□ -0.36
PTCH1-221ENST00000550914 ITGB6P18564 788 aa12.83□□□□□ -0.36
PTCH1-221ENST00000550914 CD1CP29017 333 aa12.83□□□□□ -0.36
PTCH1-221ENST00000550914 ALDH4A1P30038 563 aa12.83□□□□□ -0.36
PTCH1-221ENST00000550914 ARL4AP40617 200 aa12.83□□□□□ -0.36
PTCH1-221ENST00000550914 ETV3P41162 512 aa12.83□□□□□ -0.36
PTCH1-221ENST00000550914 LIMK2P53671 638 aa12.83□□□□□ -0.36
PTCH1-221ENST00000550914 MAZP56270 477 aaKnown RBP12.83□□□□□ -0.36
PTCH1-221ENST00000550914 SRSF6Q13247 344 aaKnown RBP12.83□□□□□ -0.36
PTCH1-221ENST00000550914 AMZ1Q400G9 498 aa12.83□□□□□ -0.36
PTCH1-221ENST00000550914 TMCO3Q6UWJ1 677 aa12.83□□□□□ -0.36
PTCH1-221ENST00000550914 ZNF574Q6ZN55 896 aaPredicted RBP12.83□□□□□ -0.36
PTCH1-221ENST00000550914 USP45Q70EL2 814 aa12.83□□□□□ -0.36
PTCH1-221ENST00000550914 POLNQ7Z5Q5 900 aa12.83□□□□□ -0.36
PTCH1-221ENST00000550914 VASH2Q86V25 355 aa12.83□□□□□ -0.36
PTCH1-221ENST00000550914 CCDC112Q8NEF3 446 aa12.83□□□□□ -0.36
PTCH1-221ENST00000550914 OR4D9Q8NGE8 314 aa12.83□□□□□ -0.36
PTCH1-221ENST00000550914 TAAR9Q96RI9 348 aa12.83□□□□□ -0.36
PTCH1-221ENST00000550914 NUDT22Q9BRQ3 303 aa12.83□□□□□ -0.36
PTCH1-221ENST00000550914 TRIM7Q9C029 511 aa12.83□□□□□ -0.36
PTCH1-221ENST00000550914 CDH19Q9H159 772 aa12.83□□□□□ -0.36
PTCH1-221ENST00000550914 NOD2Q9HC29 1040 aa12.83□□□□□ -0.36
PTCH1-221ENST00000550914 MRPL47Q9HD33 250 aaKnown RBP12.83□□□□□ -0.36
PTCH1-221ENST00000550914 AIPL1Q9NZN9 384 aa12.83□□□□□ -0.36
PTCH1-221ENST00000550914 SUFUQ9UMX1 484 aa12.83□□□□□ -0.36
PTCH1-221ENST00000550914 DOPEY2Q9Y3R5 2298 aa12.83□□□□□ -0.36
PTCH1-221ENST00000550914 LRRC53A6NM62 1247 aa12.82□□□□□ -0.36
PTCH1-221ENST00000550914 TERTO14746 1132 aaKnown RBP12.82□□□□□ -0.36
PTCH1-221ENST00000550914 MAFKO60675 156 aa12.82□□□□□ -0.36
PTCH1-221ENST00000550914 PGLSO95336 258 aa12.82□□□□□ -0.36
PTCH1-221ENST00000550914 LHCGRP22888 699 aa12.82□□□□□ -0.36
PTCH1-221ENST00000550914 SERPINB6P35237 376 aa12.82□□□□□ -0.36
PTCH1-221ENST00000550914 ADCY8P40145 1251 aa12.82□□□□□ -0.36
PTCH1-221ENST00000550914 PRKCIP41743 596 aa12.82□□□□□ -0.36
PTCH1-221ENST00000550914 GNPDA1P46926 289 aa12.82□□□□□ -0.36
PTCH1-221ENST00000550914 ATP1A2P50993 1020 aa12.82□□□□□ -0.36
PTCH1-221ENST00000550914 CDH6P55285 790 aa12.82□□□□□ -0.36
PTCH1-221ENST00000550914 GPLD1P80108 840 aa12.82□□□□□ -0.36
PTCH1-221ENST00000550914 CTBSQ01459 385 aa12.82□□□□□ -0.36
PTCH1-221ENST00000550914 TRAF2Q12933 501 aa12.82□□□□□ -0.36
PTCH1-221ENST00000550914 BIRC2Q13490 618 aa12.82□□□□□ -0.36
PTCH1-221ENST00000550914 TBR1Q16650 682 aa12.82□□□□□ -0.36
PTCH1-221ENST00000550914 RAET1GQ6H3X3 334 aa12.82□□□□□ -0.36
PTCH1-221ENST00000550914 SLC30A9Q6PML9 568 aa12.82□□□□□ -0.36
PTCH1-221ENST00000550914 ADAMTSL4Q6UY14 1074 aa12.82□□□□□ -0.36
PTCH1-221ENST00000550914 ATG14Q6ZNE5 492 aa12.82□□□□□ -0.36
PTCH1-221ENST00000550914 Q6ZVL8 140 aa12.82□□□□□ -0.36
PTCH1-221ENST00000550914 HSD11B1LQ7Z5J1 315 aa12.82□□□□□ -0.36
PTCH1-221ENST00000550914 TECPR1Q7Z6L1 1165 aa12.82□□□□□ -0.36
PTCH1-221ENST00000550914 NLRP8Q86W28 1048 aa12.82□□□□□ -0.36
PTCH1-221ENST00000550914 LRRC49Q8IUZ0 686 aa12.82□□□□□ -0.36
PTCH1-221ENST00000550914 TP53INP2Q8IXH6 220 aa12.82□□□□□ -0.36
PTCH1-221ENST00000550914 NAGSQ8N159 534 aa12.82□□□□□ -0.36
PTCH1-221ENST00000550914 PGBD5Q8N414 524 aa12.82□□□□□ -0.36
PTCH1-221ENST00000550914 PDCD6IPQ8WUM4 868 aaKnown RBP12.82□□□□□ -0.36
PTCH1-221ENST00000550914 NSMCE1Q8WV22 266 aa12.82□□□□□ -0.36
PTCH1-221ENST00000550914 DDA1Q9BW61 102 aa12.82□□□□□ -0.36
PTCH1-221ENST00000550914 HAUS4Q9H6D7 363 aa12.82□□□□□ -0.36
PTCH1-221ENST00000550914 CNOT8Q9UFF9 292 aaKnown RBP12.82□□□□□ -0.36
PTCH1-221ENST00000550914 IL17BQ9UHF5 180 aa12.82□□□□□ -0.36
PTCH1-221ENST00000550914 IGHV1OR21-1A0A087WYE8 117 aa12.81□□□□□ -0.36
PTCH1-221ENST00000550914 TTC24A2A3L6 582 aaPredicted RBP12.81□□□□□ -0.36
PTCH1-221ENST00000550914 NPIPB15A6NHN6 443 aaPredicted RBP12.81□□□□□ -0.36
PTCH1-221ENST00000550914 SUV39H1O43463 412 aa12.81□□□□□ -0.36
PTCH1-221ENST00000550914 PYGLP06737 847 aa12.81□□□□□ -0.36
PTCH1-221ENST00000550914 FAM87AP0C7U9 286 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms