RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 DGKKQ5KSL6 1271 aa20.94■□□□□ 0.94
PRDM4-205ENST00000550376 AGAP9Q5VTM2 703 aa20.94■□□□□ 0.94
PRDM4-205ENST00000550376 SDCCAG8Q86SQ7 713 aaPredicted RBP20.94■□□□□ 0.94
PRDM4-205ENST00000550376 C7orf61Q8IZ16 206 aa20.94■□□□□ 0.94
PRDM4-205ENST00000550376 SPPL3Q8TCT6 385 aa20.94■□□□□ 0.94
PRDM4-205ENST00000550376 RAD9AQ99638 391 aa20.94■□□□□ 0.94
PRDM4-205ENST00000550376 LNPEPQ9UIQ6 1025 aa20.94■□□□□ 0.94
PRDM4-205ENST00000550376 TSR3Q9UJK0 312 aaKnown RBP20.94■□□□□ 0.94
PRDM4-205ENST00000550376 ARIH1Q9Y4X5 557 aaPredicted RBP20.94■□□□□ 0.94
PRDM4-205ENST00000550376 H3BMM5 538 aa20.93■□□□□ 0.94
PRDM4-205ENST00000550376 CCDC22O60826 627 aa20.93■□□□□ 0.94
PRDM4-205ENST00000550376 LPOP22079 712 aaPredicted RBP20.93■□□□□ 0.94
PRDM4-205ENST00000550376 CALB2P22676 271 aa20.93■□□□□ 0.94
PRDM4-205ENST00000550376 RASSF2P50749 326 aa20.93■□□□□ 0.94
PRDM4-205ENST00000550376 CLCN4P51793 760 aa20.93■□□□□ 0.94
PRDM4-205ENST00000550376 KRT72Q14CN4 511 aa20.93■□□□□ 0.94
PRDM4-205ENST00000550376 INO80DQ53TQ3 878 aaPredicted RBP20.93■□□□□ 0.94
PRDM4-205ENST00000550376 ASTLQ6HA08 431 aaPredicted RBP20.93■□□□□ 0.94
PRDM4-205ENST00000550376 LYSMD3Q7Z3D4 306 aa20.93■□□□□ 0.94
PRDM4-205ENST00000550376 ISCA2Q86U28 154 aa20.93■□□□□ 0.94
PRDM4-205ENST00000550376 GABPB2Q8TAK5 448 aaPredicted RBP20.93■□□□□ 0.94
PRDM4-205ENST00000550376 RDH11Q8TC12 318 aa20.93■□□□□ 0.94
PRDM4-205ENST00000550376 ING5Q8WYH8 240 aa20.93■□□□□ 0.94
PRDM4-205ENST00000550376 EMILIN2Q9BXX0 1053 aa20.93■□□□□ 0.94
PRDM4-205ENST00000550376 TMEM114B3SHH9 223 aa20.93■□□□□ 0.94
PRDM4-205ENST00000550376 GM2AP17900 193 aa20.93■□□□□ 0.94
PRDM4-205ENST00000550376 HLA-FP30511 346 aa20.93■□□□□ 0.94
PRDM4-205ENST00000550376 RPL14P50914 215 aaKnown RBP20.93■□□□□ 0.94
PRDM4-205ENST00000550376 PPIGQ13427 754 aaKnown RBP eCLIP20.93■□□□□ 0.94
PRDM4-205ENST00000550376 CAMK1Q14012 370 aa20.93■□□□□ 0.94
PRDM4-205ENST00000550376 E2F5Q15329 346 aa20.93■□□□□ 0.94
PRDM4-205ENST00000550376 TSNAXIP1Q2TAA8 658 aa20.93■□□□□ 0.94
PRDM4-205ENST00000550376 EPGNQ6UW88 154 aa20.93■□□□□ 0.94
PRDM4-205ENST00000550376 DCAF4L2Q8NA75 395 aa20.93■□□□□ 0.94
PRDM4-205ENST00000550376 ZSWIM3Q96MP5 696 aa20.93■□□□□ 0.94
PRDM4-205ENST00000550376 GCNAQ96QF7 691 aa20.93■□□□□ 0.94
PRDM4-205ENST00000550376 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.93■□□□□ 0.94
PRDM4-205ENST00000550376 LRRC14BA6NHZ5 514 aa20.92■□□□□ 0.94
PRDM4-205ENST00000550376 A8MT66 165 aa20.92■□□□□ 0.94
PRDM4-205ENST00000550376 IQCF5A8MTL0 148 aa20.92■□□□□ 0.94
PRDM4-205ENST00000550376 GRM6O15303 877 aa20.92■□□□□ 0.94
PRDM4-205ENST00000550376 STX7O15400 261 aaKnown RBP20.92■□□□□ 0.94
PRDM4-205ENST00000550376 GSC2O15499 205 aa20.92■□□□□ 0.94
PRDM4-205ENST00000550376 DCXO43602 365 aa20.92■□□□□ 0.94
PRDM4-205ENST00000550376 LATS1O95835 1130 aa20.92■□□□□ 0.94
PRDM4-205ENST00000550376 CDC25CP30307 473 aa20.92■□□□□ 0.94
PRDM4-205ENST00000550376 CA5AP35218 305 aa20.92■□□□□ 0.94
PRDM4-205ENST00000550376 CREMQ03060 361 aa20.92■□□□□ 0.94
PRDM4-205ENST00000550376 FAM217AQ8IXS0 508 aa20.92■□□□□ 0.94
PRDM4-205ENST00000550376 TSPAN17Q96FV3 270 aa20.92■□□□□ 0.94
PRDM4-205ENST00000550376 MARK4Q96L34 752 aa20.92■□□□□ 0.94
PRDM4-205ENST00000550376 SLC30A3Q99726 388 aa20.92■□□□□ 0.94
PRDM4-205ENST00000550376 C2orf49Q9BVC5 232 aaPredicted RBP20.92■□□□□ 0.94
PRDM4-205ENST00000550376 MED16Q9Y2X0 877 aa20.92■□□□□ 0.94
PRDM4-205ENST00000550376 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.92■□□□□ 0.94
PRDM4-205ENST00000550376 TRAFD1O14545 582 aaPredicted RBP20.92■□□□□ 0.94
PRDM4-205ENST00000550376 GRID2O43424 1007 aa20.92■□□□□ 0.94
PRDM4-205ENST00000550376 MOSPD3O75425 235 aa20.92■□□□□ 0.94
PRDM4-205ENST00000550376 ZNF821O75541 412 aaPredicted RBP20.92■□□□□ 0.94
PRDM4-205ENST00000550376 FDXRP22570 491 aa20.92■□□□□ 0.94
PRDM4-205ENST00000550376 TMEM198Q66K66 360 aa20.92■□□□□ 0.94
PRDM4-205ENST00000550376 PAQR3Q6TCH7 311 aa20.92■□□□□ 0.94
PRDM4-205ENST00000550376 ZNF783Q6ZMS7 281 aa20.92■□□□□ 0.94
PRDM4-205ENST00000550376 TAS2R42Q7RTR8 314 aa20.92■□□□□ 0.94
PRDM4-205ENST00000550376 RBM15BQ8NDT2 890 aaKnown RBP20.92■□□□□ 0.94
PRDM4-205ENST00000550376 GPR150Q8NGU9 434 aa20.92■□□□□ 0.94
PRDM4-205ENST00000550376 AGAP11Q8TF27 550 aa20.92■□□□□ 0.94
PRDM4-205ENST00000550376 CLPTM1LQ96KA5 538 aa20.92■□□□□ 0.94
PRDM4-205ENST00000550376 RAB3IPQ96QF0 476 aaPredicted RBP20.92■□□□□ 0.94
PRDM4-205ENST00000550376 MID2Q9UJV3 735 aa20.92■□□□□ 0.94
PRDM4-205ENST00000550376 IKZF3Q9UKT9 509 aa20.92■□□□□ 0.94
PRDM4-205ENST00000550376 SSX2IPQ9Y2D8 614 aa20.92■□□□□ 0.94
PRDM4-205ENST00000550376 RAP2CQ9Y3L5 183 aa20.92■□□□□ 0.94
PRDM4-205ENST00000550376 NEDD8-MDP1E9PL57 170 aa20.92■□□□□ 0.94
PRDM4-205ENST00000550376 ENTPD5O75356 428 aa20.92■□□□□ 0.94
PRDM4-205ENST00000550376 NDUFS3O75489 264 aa20.92■□□□□ 0.94
PRDM4-205ENST00000550376 SRP72O76094 671 aaKnown RBP20.92■□□□□ 0.94
PRDM4-205ENST00000550376 MNAT1P51948 309 aa20.92■□□□□ 0.94
PRDM4-205ENST00000550376 NSUN2Q08J23 767 aaKnown RBP eCLIP20.92■□□□□ 0.94
PRDM4-205ENST00000550376 PTPRNQ16849 979 aa20.92■□□□□ 0.94
PRDM4-205ENST00000550376 PLEKHG6Q3KR16 790 aa20.92■□□□□ 0.94
PRDM4-205ENST00000550376 MPPE1Q53F39 396 aa20.92■□□□□ 0.94
PRDM4-205ENST00000550376 SETMARQ53H47 684 aaPredicted RBP20.92■□□□□ 0.94
PRDM4-205ENST00000550376 LRRC73Q5JTD7 316 aa20.92■□□□□ 0.94
PRDM4-205ENST00000550376 FAM109BQ6ICB4 259 aaPredicted RBP20.92■□□□□ 0.94
PRDM4-205ENST00000550376 TEX9Q8N6V9 391 aa20.92■□□□□ 0.94
PRDM4-205ENST00000550376 SCG3Q8WXD2 468 aaKnown RBP20.92■□□□□ 0.94
PRDM4-205ENST00000550376 GPR63Q9BZJ6 419 aa20.92■□□□□ 0.94
PRDM4-205ENST00000550376 DNAJC28Q9NX36 388 aa20.92■□□□□ 0.94
PRDM4-205ENST00000550376 NCKIPSDQ9NZQ3 722 aa20.92■□□□□ 0.94
PRDM4-205ENST00000550376 MATN2O00339 956 aa20.91■□□□□ 0.94
PRDM4-205ENST00000550376 RHOBTB1O94844 696 aa20.91■□□□□ 0.94
PRDM4-205ENST00000550376 RHOP08100 348 aa20.91■□□□□ 0.94
PRDM4-205ENST00000550376 ATP5F1P24539 256 aaPredicted RBP20.91■□□□□ 0.94
PRDM4-205ENST00000550376 SH2D4BQ5SQS7 431 aa20.91■□□□□ 0.94
PRDM4-205ENST00000550376 FAM45BPQ6NSW5 357 aa20.91■□□□□ 0.94
PRDM4-205ENST00000550376 RETSATQ6NUM9 610 aa20.91■□□□□ 0.94
PRDM4-205ENST00000550376 ZSWIM9Q86XI8 627 aa20.91■□□□□ 0.94
PRDM4-205ENST00000550376 TTC30BQ8N4P2 665 aa20.91■□□□□ 0.94
PRDM4-205ENST00000550376 NAT16Q8N8M0 369 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms