RNA–Protein interactions for RNA: ENST00000550346.5

TROAP-212, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 3

Gene TROAP, Length 640 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-212ENST00000550346 ATXN1LP0C7T5 689 aaKnown RBP13.05□□□□□ -0.32
TROAP-212ENST00000550346 PIRTP0C851 137 aa13.05□□□□□ -0.32
TROAP-212ENST00000550346 MYBL2P10244 700 aa13.05□□□□□ -0.32
TROAP-212ENST00000550346 C6P13671 934 aa13.05□□□□□ -0.32
TROAP-212ENST00000550346 TPH1P17752 444 aa13.05□□□□□ -0.32
TROAP-212ENST00000550346 HNRNPA2B1P22626 353 aaKnown RBP13.05□□□□□ -0.32
TROAP-212ENST00000550346 ECHS1P30084 290 aa13.05□□□□□ -0.32
TROAP-212ENST00000550346 HOXD12P35452 270 aa13.05□□□□□ -0.32
TROAP-212ENST00000550346 NPY2RP49146 381 aa13.05□□□□□ -0.32
TROAP-212ENST00000550346 AFF3P51826 1226 aaKnown RBP13.05□□□□□ -0.32
TROAP-212ENST00000550346 C21orf59P57076 290 aa13.05□□□□□ -0.32
TROAP-212ENST00000550346 VSNL1P62760 191 aa13.05□□□□□ -0.32
TROAP-212ENST00000550346 RACK1P63244 317 aaKnown RBP13.05□□□□□ -0.32
TROAP-212ENST00000550346 CAV1Q03135 178 aa13.05□□□□□ -0.32
TROAP-212ENST00000550346 PTSQ03393 145 aa13.05□□□□□ -0.32
TROAP-212ENST00000550346 MTM1Q13496 603 aa13.05□□□□□ -0.32
TROAP-212ENST00000550346 DUOXA1Q1HG43 343 aa13.05□□□□□ -0.32
TROAP-212ENST00000550346 FNBP1LQ5T0N5 605 aa13.05□□□□□ -0.32
TROAP-212ENST00000550346 LRRC66Q68CR7 880 aa13.05□□□□□ -0.32
TROAP-212ENST00000550346 CCNI2Q6ZMN8 369 aaPredicted RBP13.05□□□□□ -0.32
TROAP-212ENST00000550346 RAVER1Q8IY67 606 aaKnown RBP13.05□□□□□ -0.32
TROAP-212ENST00000550346 NRSN1Q8IZ57 195 aa13.05□□□□□ -0.32
TROAP-212ENST00000550346 BRSK1Q8TDC3 778 aa13.05□□□□□ -0.32
TROAP-212ENST00000550346 LENG8Q96PV6 779 aaPredicted RBP13.05□□□□□ -0.32
TROAP-212ENST00000550346 SMIM14Q96QK8 99 aa13.05□□□□□ -0.32
TROAP-212ENST00000550346 LYSMD1Q96S90 227 aa13.05□□□□□ -0.32
TROAP-212ENST00000550346 CDH19Q9H159 772 aa13.05□□□□□ -0.32
TROAP-212ENST00000550346 ARRDC1-AS1Q9H2J1 176 aa13.05□□□□□ -0.32
TROAP-212ENST00000550346 CASS4Q9NQ75 786 aa13.05□□□□□ -0.32
TROAP-212ENST00000550346 BFARQ9NZS9 450 aa13.05□□□□□ -0.32
TROAP-212ENST00000550346 PILRBQ9UKJ0 227 aa13.05□□□□□ -0.32
TROAP-212ENST00000550346 COQ6Q9Y2Z9 468 aa13.05□□□□□ -0.32
TROAP-212ENST00000550346 PLXNA2O75051 1894 aa13.05□□□□□ -0.32
TROAP-212ENST00000550346 ZNF106Q9H2Y7 1883 aaKnown RBP13.04□□□□□ -0.32
TROAP-212ENST00000550346 PLXNB3Q9ULL4 1909 aa13.04□□□□□ -0.32
TROAP-212ENST00000550346 SMAPO00193 183 aa13.04□□□□□ -0.32
TROAP-212ENST00000550346 STX7O15400 261 aaKnown RBP13.04□□□□□ -0.32
TROAP-212ENST00000550346 EPN2O95208 641 aa13.04□□□□□ -0.32
TROAP-212ENST00000550346 SLC4A1P02730 911 aa13.04□□□□□ -0.32
TROAP-212ENST00000550346 CFIP05156 583 aa13.04□□□□□ -0.32
TROAP-212ENST00000550346 LPOP22079 712 aaPredicted RBP13.04□□□□□ -0.32
TROAP-212ENST00000550346 CD38P28907 300 aa13.04□□□□□ -0.32
TROAP-212ENST00000550346 TNFRSF8P28908 595 aa13.04□□□□□ -0.32
TROAP-212ENST00000550346 NHLH1Q02575 133 aa13.04□□□□□ -0.32
TROAP-212ENST00000550346 RALGDSQ12967 914 aa13.04□□□□□ -0.32
TROAP-212ENST00000550346 PTPRRQ15256 657 aa13.04□□□□□ -0.32
TROAP-212ENST00000550346 TAF1AQ15573 450 aaPredicted RBP13.04□□□□□ -0.32
TROAP-212ENST00000550346 CNGA3Q16281 694 aa13.04□□□□□ -0.32
TROAP-212ENST00000550346 MSS51Q4VC12 460 aa13.04□□□□□ -0.32
TROAP-212ENST00000550346 ZDHHC20Q5W0Z9 365 aa13.04□□□□□ -0.32
TROAP-212ENST00000550346 WDR93Q6P2C0 686 aa13.04□□□□□ -0.32
TROAP-212ENST00000550346 LRRC8BQ6P9F7 803 aa13.04□□□□□ -0.32
TROAP-212ENST00000550346 LYSMD3Q7Z3D4 306 aa13.04□□□□□ -0.32
TROAP-212ENST00000550346 GLT6D1Q7Z4J2 308 aa13.04□□□□□ -0.32
TROAP-212ENST00000550346 HSD11B1LQ7Z5J1 315 aa13.04□□□□□ -0.32
TROAP-212ENST00000550346 TSPAN33Q86UF1 283 aa13.04□□□□□ -0.32
TROAP-212ENST00000550346 DCP2Q8IU60 420 aaKnown RBP13.04□□□□□ -0.32
TROAP-212ENST00000550346 GSPT2Q8IYD1 628 aaKnown RBP13.04□□□□□ -0.32
TROAP-212ENST00000550346 SUMF1Q8NBK3 374 aa13.04□□□□□ -0.32
TROAP-212ENST00000550346 RUBCNQ92622 972 aa13.04□□□□□ -0.32
TROAP-212ENST00000550346 NUS1Q96E22 293 aa13.04□□□□□ -0.32
TROAP-212ENST00000550346 KLHDC7BQ96G42 594 aa13.04□□□□□ -0.32
TROAP-212ENST00000550346 SERPINB12Q96P63 405 aa13.04□□□□□ -0.32
TROAP-212ENST00000550346 NUSAP1Q9BXS6 441 aaKnown RBP13.04□□□□□ -0.32
TROAP-212ENST00000550346 FAM83DQ9H4H8 585 aa13.04□□□□□ -0.32
TROAP-212ENST00000550346 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.04□□□□□ -0.32
TROAP-212ENST00000550346 ZNF711Q9Y462 761 aa13.04□□□□□ -0.32
TROAP-212ENST00000550346 PI4KAP42356 2102 aa13.03□□□□□ -0.32
TROAP-212ENST00000550346 TOR1BO14657 336 aa13.03□□□□□ -0.32
TROAP-212ENST00000550346 KHNYNO15037 678 aaKnown RBP13.03□□□□□ -0.32
TROAP-212ENST00000550346 SPINT1O43278 529 aa13.03□□□□□ -0.32
TROAP-212ENST00000550346 PPFIA2O75334 1257 aa13.03□□□□□ -0.32
TROAP-212ENST00000550346 BANF1O75531 89 aa13.03□□□□□ -0.32
TROAP-212ENST00000550346 PYGLP06737 847 aa13.03□□□□□ -0.32
TROAP-212ENST00000550346 FAM153BP0C7A2 387 aa13.03□□□□□ -0.32
TROAP-212ENST00000550346 MLNP12872 115 aa13.03□□□□□ -0.32
TROAP-212ENST00000550346 ETV3P41162 512 aa13.03□□□□□ -0.32
TROAP-212ENST00000550346 STC1P52823 247 aa13.03□□□□□ -0.32
TROAP-212ENST00000550346 SESN2P58004 480 aaPredicted RBP13.03□□□□□ -0.32
TROAP-212ENST00000550346 OVGP1Q12889 678 aa13.03□□□□□ -0.32
TROAP-212ENST00000550346 MSLNQ13421 630 aaPredicted RBP13.03□□□□□ -0.32
TROAP-212ENST00000550346 SEPT6Q14141 434 aa13.03□□□□□ -0.32
TROAP-212ENST00000550346 AGERQ15109 404 aa13.03□□□□□ -0.32
TROAP-212ENST00000550346 SKIDA1Q1XH10 827 aa13.03□□□□□ -0.32
TROAP-212ENST00000550346 FAM153CQ494X1 144 aa13.03□□□□□ -0.32
TROAP-212ENST00000550346 CERCAMQ5T4B2 595 aa13.03□□□□□ -0.32
TROAP-212ENST00000550346 Q6ZVL8 140 aa13.03□□□□□ -0.32
TROAP-212ENST00000550346 NLRP9Q7RTR0 991 aa13.03□□□□□ -0.32
TROAP-212ENST00000550346 TMC3Q7Z5M5 1100 aa13.03□□□□□ -0.32
TROAP-212ENST00000550346 CBARPQ8N350 705 aaPredicted RBP13.03□□□□□ -0.32
TROAP-212ENST00000550346 ZCCHC9Q8N567 271 aaKnown RBP13.03□□□□□ -0.32
TROAP-212ENST00000550346 MFSD2AQ8NA29 543 aa13.03□□□□□ -0.32
TROAP-212ENST00000550346 DENND6BQ8NEG7 585 aa13.03□□□□□ -0.32
TROAP-212ENST00000550346 AP2M1Q96CW1 435 aa13.03□□□□□ -0.32
TROAP-212ENST00000550346 COQ10AQ96MF6 247 aa13.03□□□□□ -0.32
TROAP-212ENST00000550346 MYOCQ99972 504 aa13.03□□□□□ -0.32
TROAP-212ENST00000550346 FRMD8Q9BZ67 464 aaPredicted RBP13.03□□□□□ -0.32
TROAP-212ENST00000550346 FAM129AQ9BZQ8 928 aa13.03□□□□□ -0.32
TROAP-212ENST00000550346 XAB2Q9HCS7 855 aaKnown RBP13.03□□□□□ -0.32
TROAP-212ENST00000550346 TM9SF3Q9HD45 589 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms