RNA–Protein interactions for RNA: ENST00000550233.1

TMEM116-211, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 5

Gene TMEM116, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-211ENST00000550233 VCPIP1Q96JH7 1222 aa4.88□□□□□ -1.63
TMEM116-211ENST00000550233 RMDN2Q96LZ7 410 aa4.88□□□□□ -1.63
TMEM116-211ENST00000550233 ZNF830Q96NB3 372 aaPredicted RBP4.88□□□□□ -1.63
TMEM116-211ENST00000550233 TNMDQ9H2S6 317 aa4.88□□□□□ -1.63
TMEM116-211ENST00000550233 NOL11Q9H8H0 719 aaKnown RBP4.88□□□□□ -1.63
TMEM116-211ENST00000550233 MRPL44Q9H9J2 332 aaKnown RBP4.88□□□□□ -1.63
TMEM116-211ENST00000550233 CYP4F11Q9HBI6 524 aa4.88□□□□□ -1.63
TMEM116-211ENST00000550233 OLAHQ9NV23 265 aa4.88□□□□□ -1.63
TMEM116-211ENST00000550233 HPF1Q9NWY4 346 aa4.88□□□□□ -1.63
TMEM116-211ENST00000550233 ASIC5Q9NY37 505 aa4.88□□□□□ -1.63
TMEM116-211ENST00000550233 MAST3O60307 1309 aa4.88□□□□□ -1.63
TMEM116-211ENST00000550233 HSPB2A8KAH6 182 aa4.87□□□□□ -1.63
TMEM116-211ENST00000550233 H0YIN7 160 aa4.87□□□□□ -1.63
TMEM116-211ENST00000550233 PGRMC2O15173 223 aa4.87□□□□□ -1.63
TMEM116-211ENST00000550233 SMAD9O15198 467 aaKnown RBP4.87□□□□□ -1.63
TMEM116-211ENST00000550233 SLC25A17O43808 307 aa4.87□□□□□ -1.63
TMEM116-211ENST00000550233 KINO60870 393 aaKnown RBP4.87□□□□□ -1.63
TMEM116-211ENST00000550233 MMP2P08253 660 aa4.87□□□□□ -1.63
TMEM116-211ENST00000550233 MMP3P08254 477 aa4.87□□□□□ -1.63
TMEM116-211ENST00000550233 LINGO3P0C6S8 592 aa4.87□□□□□ -1.63
TMEM116-211ENST00000550233 ETFAP13804 333 aa4.87□□□□□ -1.63
TMEM116-211ENST00000550233 PFKFB1P16118 471 aa4.87□□□□□ -1.63
TMEM116-211ENST00000550233 PRLRP16471 622 aa4.87□□□□□ -1.63
TMEM116-211ENST00000550233 SRD5A1P18405 259 aa4.87□□□□□ -1.63
TMEM116-211ENST00000550233 EDN2P20800 178 aa4.87□□□□□ -1.63
TMEM116-211ENST00000550233 ACHEP22303 614 aa4.87□□□□□ -1.63
TMEM116-211ENST00000550233 EEF1B2P24534 225 aaKnown RBP4.87□□□□□ -1.63
TMEM116-211ENST00000550233 ZFP36P26651 326 aaKnown RBP4.87□□□□□ -1.63
TMEM116-211ENST00000550233 TACR3P29371 465 aa4.87□□□□□ -1.63
TMEM116-211ENST00000550233 HOXC9P31274 260 aa4.87□□□□□ -1.63
TMEM116-211ENST00000550233 SELENOPP49908 381 aa4.87□□□□□ -1.63
TMEM116-211ENST00000550233 SUOXP51687 545 aa4.87□□□□□ -1.63
TMEM116-211ENST00000550233 NAGLUP54802 743 aa4.87□□□□□ -1.63
TMEM116-211ENST00000550233 MRPS35P82673 323 aaKnown RBP4.87□□□□□ -1.63
TMEM116-211ENST00000550233 ECT2LQ008S8 904 aa4.87□□□□□ -1.63
TMEM116-211ENST00000550233 RPA4Q13156 261 aa4.87□□□□□ -1.63
TMEM116-211ENST00000550233 CBX3Q13185 183 aa4.87□□□□□ -1.63
TMEM116-211ENST00000550233 ITGA7Q13683 1181 aa4.87□□□□□ -1.63
TMEM116-211ENST00000550233 CAPSQ13938 189 aa4.87□□□□□ -1.63
TMEM116-211ENST00000550233 HSPB2Q16082 182 aa4.87□□□□□ -1.63
TMEM116-211ENST00000550233 PKN1Q16512 942 aa4.87□□□□□ -1.63
TMEM116-211ENST00000550233 C6orf136Q5SQH8 315 aa4.87□□□□□ -1.63
TMEM116-211ENST00000550233 AAGABQ6PD74 315 aa4.87□□□□□ -1.63
TMEM116-211ENST00000550233 RBM44Q6ZP01 1051 aaKnown RBP4.87□□□□□ -1.63
TMEM116-211ENST00000550233 CLEC17AQ6ZS10 378 aa4.87□□□□□ -1.63
TMEM116-211ENST00000550233 NUP54Q7Z3B4 507 aa4.87□□□□□ -1.63
TMEM116-211ENST00000550233 LIMS2Q7Z4I7 341 aa4.87□□□□□ -1.63
TMEM116-211ENST00000550233 CENPVQ7Z7K6 275 aaPredicted RBP4.87□□□□□ -1.63
TMEM116-211ENST00000550233 AACSQ86V21 672 aa4.87□□□□□ -1.63
TMEM116-211ENST00000550233 HOOK3Q86VS8 718 aa4.87□□□□□ -1.63
TMEM116-211ENST00000550233 LURAP1LQ8IV03 231 aa4.87□□□□□ -1.63
TMEM116-211ENST00000550233 FAM217AQ8IXS0 508 aa4.87□□□□□ -1.63
TMEM116-211ENST00000550233 MCPH1Q8NEM0 835 aa4.87□□□□□ -1.63
TMEM116-211ENST00000550233 OR14L1PQ8NHC6 308 aa4.87□□□□□ -1.63
TMEM116-211ENST00000550233 RASSF8Q8NHQ8 419 aa4.87□□□□□ -1.63
TMEM116-211ENST00000550233 BCAS4Q8TDM0 211 aa4.87□□□□□ -1.63
TMEM116-211ENST00000550233 ATL1Q8WXF7 558 aa4.87□□□□□ -1.63
TMEM116-211ENST00000550233 PIGKQ92643 395 aa4.87□□□□□ -1.63
TMEM116-211ENST00000550233 SNAPC3Q92966 411 aa4.87□□□□□ -1.63
TMEM116-211ENST00000550233 SPACA9Q96E40 222 aaPredicted RBP4.87□□□□□ -1.63
TMEM116-211ENST00000550233 CLMNQ96JQ2 1002 aa4.87□□□□□ -1.63
TMEM116-211ENST00000550233 AK8Q96MA6 479 aa4.87□□□□□ -1.63
TMEM116-211ENST00000550233 SPXQ9BT56 116 aa4.87□□□□□ -1.63
TMEM116-211ENST00000550233 FSD1Q9BTV5 496 aa4.87□□□□□ -1.63
TMEM116-211ENST00000550233 SSBP3Q9BWW4 388 aaPredicted RBP4.87□□□□□ -1.63
TMEM116-211ENST00000550233 CDT1Q9H211 546 aa4.87□□□□□ -1.63
TMEM116-211ENST00000550233 SLCO5A1Q9H2Y9 848 aa4.87□□□□□ -1.63
TMEM116-211ENST00000550233 KCNK15Q9H427 330 aa4.87□□□□□ -1.63
TMEM116-211ENST00000550233 NRIP3Q9NQ35 241 aa4.87□□□□□ -1.63
TMEM116-211ENST00000550233 PAG1Q9NWQ8 432 aa4.87□□□□□ -1.63
TMEM116-211ENST00000550233 TRMT1Q9NXH9 659 aaKnown RBP4.87□□□□□ -1.63
TMEM116-211ENST00000550233 ANKFY1Q9P2R3 1169 aa4.87□□□□□ -1.63
TMEM116-211ENST00000550233 NDRG3Q9UGV2 375 aa4.87□□□□□ -1.63
TMEM116-211ENST00000550233 ARMCX3Q9UH62 379 aaPredicted RBP4.87□□□□□ -1.63
TMEM116-211ENST00000550233 HOOK1Q9UJC3 728 aaKnown RBP4.87□□□□□ -1.63
TMEM116-211ENST00000550233 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.87□□□□□ -1.63
TMEM116-211ENST00000550233 A3GALT2U3KPV4 340 aa4.87□□□□□ -1.63
TMEM116-211ENST00000550233 A0A0U1RQF3 1178 aa4.86□□□□□ -1.63
TMEM116-211ENST00000550233 CENPVL1A0A0U1RR11 272 aa4.86□□□□□ -1.63
TMEM116-211ENST00000550233 KANSL1LA0AUZ9 987 aa4.86□□□□□ -1.63
TMEM116-211ENST00000550233 CXorf65A6NEN9 183 aa4.86□□□□□ -1.63
TMEM116-211ENST00000550233 KDM4EB2RXH2 506 aaPredicted RBP4.86□□□□□ -1.63
TMEM116-211ENST00000550233 SLC33A1O00400 549 aaPredicted RBP4.86□□□□□ -1.63
TMEM116-211ENST00000550233 SLC30A4O14863 429 aa4.86□□□□□ -1.63
TMEM116-211ENST00000550233 PLRG1O43660 514 aaKnown RBP4.86□□□□□ -1.63
TMEM116-211ENST00000550233 SEC22BO75396 215 aa4.86□□□□□ -1.63
TMEM116-211ENST00000550233 SLCO2B1O94956 709 aa4.86□□□□□ -1.63
TMEM116-211ENST00000550233 CHRM5P08912 532 aaPredicted RBP4.86□□□□□ -1.63
TMEM116-211ENST00000550233 CD58P19256 250 aa4.86□□□□□ -1.63
TMEM116-211ENST00000550233 NR4A1P22736 598 aa4.86□□□□□ -1.63
TMEM116-211ENST00000550233 MAPK3P27361 379 aaPredicted RBP4.86□□□□□ -1.63
TMEM116-211ENST00000550233 CHATP28329 748 aa4.86□□□□□ -1.63
TMEM116-211ENST00000550233 SOAT1P35610 550 aa4.86□□□□□ -1.63
TMEM116-211ENST00000550233 SNU13P55769 128 aaKnown RBP4.86□□□□□ -1.63
TMEM116-211ENST00000550233 GRSF1Q12849 480 aaKnown RBP eCLIP4.86□□□□□ -1.63
TMEM116-211ENST00000550233 GRIK3Q13003 919 aa4.86□□□□□ -1.63
TMEM116-211ENST00000550233 NAE1Q13564 534 aa4.86□□□□□ -1.63
TMEM116-211ENST00000550233 RCN2Q14257 317 aa4.86□□□□□ -1.63
TMEM116-211ENST00000550233 KRT33BQ14525 404 aa4.86□□□□□ -1.63
TMEM116-211ENST00000550233 SYTL3Q4VX76 610 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms