RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 PLA2G15Q8NCC3 412 aa19.34■□□□□ 0.69
DDX54-207ENST00000550016 LRRC45Q96CN5 670 aa19.34■□□□□ 0.69
DDX54-207ENST00000550016 NAPGQ99747 312 aaPredicted RBP19.34■□□□□ 0.69
DDX54-207ENST00000550016 RTKNQ9BST9 563 aa19.34■□□□□ 0.69
DDX54-207ENST00000550016 APOOQ9BUR5 198 aa19.34■□□□□ 0.69
DDX54-207ENST00000550016 ZFYVE1Q9HBF4 777 aa19.34■□□□□ 0.69
DDX54-207ENST00000550016 PCDHGB2Q9Y5G2 931 aa19.34■□□□□ 0.69
DDX54-207ENST00000550016 CTAGE9A4FU28 777 aa19.33■□□□□ 0.68
DDX54-207ENST00000550016 RGSL1A5PLK6 1076 aa19.33■□□□□ 0.68
DDX54-207ENST00000550016 ZNF185O15231 689 aa19.33■□□□□ 0.68
DDX54-207ENST00000550016 YKT6O15498 198 aa19.33■□□□□ 0.68
DDX54-207ENST00000550016 CD59P13987 128 aa19.33■□□□□ 0.68
DDX54-207ENST00000550016 TRIM23P36406 574 aa19.33■□□□□ 0.68
DDX54-207ENST00000550016 CCT8P50990 548 aa19.33■□□□□ 0.68
DDX54-207ENST00000550016 DPTQ07507 201 aa19.33■□□□□ 0.68
DDX54-207ENST00000550016 FZD2Q14332 565 aa19.33■□□□□ 0.68
DDX54-207ENST00000550016 PAPD7Q5XG87 772 aaKnown RBP19.33■□□□□ 0.68
DDX54-207ENST00000550016 ZNF765Q7L2R6 523 aa19.33■□□□□ 0.68
DDX54-207ENST00000550016 TMC3Q7Z5M5 1100 aa19.33■□□□□ 0.68
DDX54-207ENST00000550016 NLRP8Q86W28 1048 aa19.33■□□□□ 0.68
DDX54-207ENST00000550016 GPR63Q9BZJ6 419 aa19.33■□□□□ 0.68
DDX54-207ENST00000550016 ABCG8Q9H221 673 aa19.33■□□□□ 0.68
DDX54-207ENST00000550016 TRABDQ9H4I3 376 aa19.33■□□□□ 0.68
DDX54-207ENST00000550016 DLL3Q9NYJ7 618 aa19.33■□□□□ 0.68
DDX54-207ENST00000550016 PKD2L2Q9NZM6 624 aa19.33■□□□□ 0.68
DDX54-207ENST00000550016 HACD3Q9P035 362 aa19.33■□□□□ 0.68
DDX54-207ENST00000550016 SHOC2Q9UQ13 582 aa19.33■□□□□ 0.68
DDX54-207ENST00000550016 ZNF711Q9Y462 761 aa19.33■□□□□ 0.68
DDX54-207ENST00000550016 SPO11Q9Y5K1 396 aa19.33■□□□□ 0.68
DDX54-207ENST00000550016 ARID1BQ8NFD5 2236 aaPredicted RBP19.32■□□□□ 0.68
DDX54-207ENST00000550016 MYLKQ15746 1914 aa19.32■□□□□ 0.68
DDX54-207ENST00000550016 HOXC4P09017 264 aaPredicted RBP19.32■□□□□ 0.68
DDX54-207ENST00000550016 ETS1P14921 441 aa19.32■□□□□ 0.68
DDX54-207ENST00000550016 TSHRP16473 764 aa19.32■□□□□ 0.68
DDX54-207ENST00000550016 FDFT1P37268 417 aa19.32■□□□□ 0.68
DDX54-207ENST00000550016 KCNJ1P48048 391 aa19.32■□□□□ 0.68
DDX54-207ENST00000550016 SPINT3P49223 89 aa19.32■□□□□ 0.68
DDX54-207ENST00000550016 PUM1Q14671 1186 aaKnown RBP eCLIP19.32■□□□□ 0.683e-8■■□□□ 13.5
DDX54-207ENST00000550016 SUZ12Q15022 739 aaKnown RBP19.32■□□□□ 0.68
DDX54-207ENST00000550016 SHBQ15464 509 aa19.32■□□□□ 0.68
DDX54-207ENST00000550016 TPRG1LQ5T0D9 272 aa19.32■□□□□ 0.68
DDX54-207ENST00000550016 KCTD11Q693B1 232 aa19.32■□□□□ 0.68
DDX54-207ENST00000550016 GSTA5Q7RTV2 222 aa19.32■□□□□ 0.68
DDX54-207ENST00000550016 AP2M1Q96CW1 435 aa19.32■□□□□ 0.68
DDX54-207ENST00000550016 TBL1YQ9BQ87 522 aa19.32■□□□□ 0.68
DDX54-207ENST00000550016 AP1M1Q9BXS5 423 aa19.32■□□□□ 0.68
DDX54-207ENST00000550016 SMARCAL1Q9NZC9 954 aa19.32■□□□□ 0.68
DDX54-207ENST00000550016 PAK5Q9P286 719 aa19.32■□□□□ 0.68
DDX54-207ENST00000550016 CD84Q9UIB8 345 aa19.32■□□□□ 0.68
DDX54-207ENST00000550016 OR1A2Q9Y585 309 aa19.32■□□□□ 0.68
DDX54-207ENST00000550016 K7ESM1 405 aa19.31■□□□□ 0.68
DDX54-207ENST00000550016 PCDHGA12O60330 932 aa19.31■□□□□ 0.68
DDX54-207ENST00000550016 HTR1BP28222 390 aa19.31■□□□□ 0.68
DDX54-207ENST00000550016 TEAD1P28347 426 aa19.31■□□□□ 0.68
DDX54-207ENST00000550016 ID4P47928 161 aa19.31■□□□□ 0.68
DDX54-207ENST00000550016 IL9RQ01113 521 aa19.31■□□□□ 0.68
DDX54-207ENST00000550016 NFATC4Q14934 902 aa19.31■□□□□ 0.68
DDX54-207ENST00000550016 CYP1B1Q16678 543 aa19.31■□□□□ 0.68
DDX54-207ENST00000550016 FAXCQ5TGI0 409 aa19.31■□□□□ 0.68
DDX54-207ENST00000550016 C4orf22Q6V702 233 aa19.31■□□□□ 0.68
DDX54-207ENST00000550016 MACC1Q6ZN28 852 aa19.31■□□□□ 0.68
DDX54-207ENST00000550016 PARGQ86W56 976 aa19.31■□□□□ 0.68
DDX54-207ENST00000550016 PELI3Q8N2H9 469 aa19.31■□□□□ 0.68
DDX54-207ENST00000550016 TAB3Q8N5C8 712 aaPredicted RBP19.31■□□□□ 0.68
DDX54-207ENST00000550016 ATL2Q8NHH9 583 aa19.31■□□□□ 0.68
DDX54-207ENST00000550016 MAGOHBQ96A72 148 aaKnown RBP19.31■□□□□ 0.68
DDX54-207ENST00000550016 EID2BQ96D98 161 aa19.31■□□□□ 0.68
DDX54-207ENST00000550016 APOL2Q9BQE5 337 aa19.31■□□□□ 0.68
DDX54-207ENST00000550016 FAM83DQ9H4H8 585 aa19.31■□□□□ 0.68
DDX54-207ENST00000550016 LRRC40Q9H9A6 602 aa19.31■□□□□ 0.68
DDX54-207ENST00000550016 ARNT2Q9HBZ2 717 aa19.31■□□□□ 0.68
DDX54-207ENST00000550016 RAD18Q9NS91 495 aa19.31■□□□□ 0.68
DDX54-207ENST00000550016 SAR1BQ9Y6B6 198 aa19.31■□□□□ 0.68
DDX54-207ENST00000550016 CNOT1A5YKK6 2376 aaKnown RBP19.3■□□□□ 0.68
DDX54-207ENST00000550016 CACNB4O00305 520 aaPredicted RBP19.3■□□□□ 0.68
DDX54-207ENST00000550016 PYGLP06737 847 aa19.3■□□□□ 0.68
DDX54-207ENST00000550016 RPL22P35268 128 aaKnown RBP19.3■□□□□ 0.68
DDX54-207ENST00000550016 KIAA1024LP59773 190 aa19.3■□□□□ 0.68
DDX54-207ENST00000550016 EIF2B5Q13144 721 aaKnown RBP19.3■□□□□ 0.68
DDX54-207ENST00000550016 OLIG2Q13516 323 aa19.3■□□□□ 0.68
DDX54-207ENST00000550016 SPARCL1Q14515 664 aa19.3■□□□□ 0.68
DDX54-207ENST00000550016 RAET1GQ6H3X3 334 aa19.3■□□□□ 0.68
DDX54-207ENST00000550016 DENND5AQ6IQ26 1287 aa19.3■□□□□ 0.68
DDX54-207ENST00000550016 DBX2Q6ZNG2 339 aa19.3■□□□□ 0.68
DDX54-207ENST00000550016 PIP4P1Q86T03 277 aa19.3■□□□□ 0.68
DDX54-207ENST00000550016 PRUNE1Q86TP1 453 aa19.3■□□□□ 0.68
DDX54-207ENST00000550016 TTC30BQ8N4P2 665 aa19.3■□□□□ 0.68
DDX54-207ENST00000550016 PDCD7Q8N8D1 485 aaKnown RBP19.3■□□□□ 0.68
DDX54-207ENST00000550016 GLIS1Q8NBF1 620 aa19.3■□□□□ 0.68
DDX54-207ENST00000550016 BLOC1S5Q8TDH9 187 aa19.3■□□□□ 0.68
DDX54-207ENST00000550016 SCAMP4Q969E2 229 aa19.3■□□□□ 0.68
DDX54-207ENST00000550016 FUBP1Q96AE4 644 aaKnown RBP19.3■□□□□ 0.68
DDX54-207ENST00000550016 RIOK2Q9BVS4 552 aaKnown RBP19.3■□□□□ 0.68
DDX54-207ENST00000550016 TEX101Q9BY14 249 aa19.3■□□□□ 0.68
DDX54-207ENST00000550016 CDH19Q9H159 772 aa19.3■□□□□ 0.68
DDX54-207ENST00000550016 WDR26Q9H7D7 661 aa19.3■□□□□ 0.68
DDX54-207ENST00000550016 ETNK1Q9HBU6 452 aa19.3■□□□□ 0.68
DDX54-207ENST00000550016 PHPT1Q9NRX4 125 aaPredicted RBP19.3■□□□□ 0.68
DDX54-207ENST00000550016 DNAJC28Q9NX36 388 aa19.3■□□□□ 0.68
DDX54-207ENST00000550016 FEZ2Q9UHY8 353 aaPredicted RBP19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms