RNA–Protein interactions for RNA: ENST00000549655.5

BRF1-215, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-215ENST00000549655 ZNF711Q9Y462 761 aa19.12■□□□□ 0.65
BRF1-215ENST00000549655 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.12■□□□□ 0.65
BRF1-215ENST00000549655 TRAFD1O14545 582 aaPredicted RBP19.12■□□□□ 0.65
BRF1-215ENST00000549655 PER2O15055 1255 aa19.12■□□□□ 0.65
BRF1-215ENST00000549655 HNRNPCL1O60812 293 aaKnown RBP19.12■□□□□ 0.65
BRF1-215ENST00000549655 NDUFS3O75489 264 aa19.12■□□□□ 0.65
BRF1-215ENST00000549655 PRAMEF12O95522 483 aa19.12■□□□□ 0.65
BRF1-215ENST00000549655 SERPINA6P08185 405 aa19.12■□□□□ 0.65
BRF1-215ENST00000549655 GKP32189 559 aa19.12■□□□□ 0.65
BRF1-215ENST00000549655 MC4RP32245 332 aa19.12■□□□□ 0.65
BRF1-215ENST00000549655 MAPK8P45983 427 aa19.12■□□□□ 0.65
BRF1-215ENST00000549655 CDKN1CP49918 316 aaPredicted RBP19.12■□□□□ 0.65
BRF1-215ENST00000549655 PFKPQ01813 784 aa19.12■□□□□ 0.65
BRF1-215ENST00000549655 LEMD2Q8NC56 503 aa19.12■□□□□ 0.65
BRF1-215ENST00000549655 AGR3Q8TD06 166 aa19.12■□□□□ 0.65
BRF1-215ENST00000549655 LPGAT1Q92604 370 aa19.12■□□□□ 0.65
BRF1-215ENST00000549655 TLE6Q9H808 572 aa19.12■□□□□ 0.65
BRF1-215ENST00000549655 APOBEC2Q9Y235 224 aaKnown RBP19.12■□□□□ 0.65
BRF1-215ENST00000549655 FNDC3AQ9Y2H6 1198 aaKnown RBP19.12■□□□□ 0.65
BRF1-215ENST00000549655 RAP2CQ9Y3L5 183 aa19.12■□□□□ 0.65
BRF1-215ENST00000549655 NEMP2A6NFY4 417 aa19.11■□□□□ 0.65
BRF1-215ENST00000549655 NEDD8-MDP1E9PL57 170 aa19.11■□□□□ 0.65
BRF1-215ENST00000549655 HTRA2O43464 458 aaPredicted RBP19.11■□□□□ 0.65
BRF1-215ENST00000549655 IGSF6O95976 241 aa19.11■□□□□ 0.65
BRF1-215ENST00000549655 PENKP01210 267 aaPredicted RBP19.11■□□□□ 0.65
BRF1-215ENST00000549655 RB1P06400 928 aa19.11■□□□□ 0.65
BRF1-215ENST00000549655 ALPIP09923 528 aa19.11■□□□□ 0.65
BRF1-215ENST00000549655 MPSTP25325 297 aa19.11■□□□□ 0.65
BRF1-215ENST00000549655 FMO4P31512 558 aa19.11■□□□□ 0.65
BRF1-215ENST00000549655 STK19P49842 368 aaPredicted RBP19.11■□□□□ 0.65
BRF1-215ENST00000549655 SUOXP51687 545 aa19.11■□□□□ 0.65
BRF1-215ENST00000549655 DNAJB13P59910 316 aa19.11■□□□□ 0.65
BRF1-215ENST00000549655 FUT11Q495W5 492 aa19.11■□□□□ 0.65
BRF1-215ENST00000549655 CFAP157Q5JU67 520 aa19.11■□□□□ 0.65
BRF1-215ENST00000549655 PRSS36Q5K4E3 855 aa19.11■□□□□ 0.65
BRF1-215ENST00000549655 VWA5B1Q5TIE3 1220 aa19.11■□□□□ 0.65
BRF1-215ENST00000549655 GRASPQ7Z6J2 395 aaPredicted RBP19.11■□□□□ 0.65
BRF1-215ENST00000549655 PIANPQ8IYJ0 282 aa19.11■□□□□ 0.65
BRF1-215ENST00000549655 CCNYL1Q8N7R7 359 aa19.11■□□□□ 0.65
BRF1-215ENST00000549655 GPR63Q9BZJ6 419 aa19.11■□□□□ 0.65
BRF1-215ENST00000549655 POMKQ9H5K3 350 aa19.11■□□□□ 0.65
BRF1-215ENST00000549655 COG4Q9H9E3 785 aa19.11■□□□□ 0.65
BRF1-215ENST00000549655 STK38LQ9Y2H1 464 aa19.11■□□□□ 0.65
BRF1-215ENST00000549655 PKP3Q9Y446 797 aa19.11■□□□□ 0.65
BRF1-215ENST00000549655 CAPN14A8MX76 684 aa19.1■□□□□ 0.65
BRF1-215ENST00000549655 GRXCR1A8MXD5 290 aa19.1■□□□□ 0.65
BRF1-215ENST00000549655 H7C0S8 307 aa19.1■□□□□ 0.65
BRF1-215ENST00000549655 DIAPH2O60879 1101 aa19.1■□□□□ 0.65
BRF1-215ENST00000549655 TFEBP19484 476 aa19.1■□□□□ 0.65
BRF1-215ENST00000549655 PTPN4P29074 926 aa19.1■□□□□ 0.65
BRF1-215ENST00000549655 RPL26P61254 145 aaKnown RBP19.1■□□□□ 0.65
BRF1-215ENST00000549655 PEX6Q13608 980 aa19.1■□□□□ 0.65
BRF1-215ENST00000549655 ZRANB3Q5FWF4 1079 aa19.1■□□□□ 0.65
BRF1-215ENST00000549655 ASTLQ6HA08 431 aaPredicted RBP19.1■□□□□ 0.65
BRF1-215ENST00000549655 PSAPL1Q6NUJ1 521 aa19.1■□□□□ 0.65
BRF1-215ENST00000549655 LYSMD3Q7Z3D4 306 aa19.1■□□□□ 0.65
BRF1-215ENST00000549655 RYBPQ8N488 228 aaPredicted RBP19.1■□□□□ 0.65
BRF1-215ENST00000549655 PAF1Q8N7H5 531 aa19.1■□□□□ 0.65
BRF1-215ENST00000549655 FAM136AQ96C01 138 aa19.1■□□□□ 0.65
BRF1-215ENST00000549655 EID2BQ96D98 161 aa19.1■□□□□ 0.65
BRF1-215ENST00000549655 ZSWIM3Q96MP5 696 aa19.1■□□□□ 0.65
BRF1-215ENST00000549655 RAB3IPQ96QF0 476 aaPredicted RBP19.1■□□□□ 0.65
BRF1-215ENST00000549655 BBS2Q9BXC9 721 aa19.1■□□□□ 0.65
BRF1-215ENST00000549655 LINC00597Q9H2U6 94 aa19.1■□□□□ 0.65
BRF1-215ENST00000549655 POPDC3Q9HBV1 291 aa19.1■□□□□ 0.65
BRF1-215ENST00000549655 IL17CQ9P0M4 197 aa19.1■□□□□ 0.65
BRF1-215ENST00000549655 RPL26L1Q9UNX3 145 aaKnown RBP19.1■□□□□ 0.65
BRF1-215ENST00000549655 CHD7Q9P2D1 2997 aa19.1■□□□□ 0.65
BRF1-215ENST00000549655 SOBPA7XYQ1 873 aa19.1■□□□□ 0.65
BRF1-215ENST00000549655 MGRN1O60291 552 aa19.1■□□□□ 0.65
BRF1-215ENST00000549655 SOCS5O75159 536 aa19.1■□□□□ 0.65
BRF1-215ENST00000549655 SRP72O76094 671 aaKnown RBP19.1■□□□□ 0.65
BRF1-215ENST00000549655 SRCP12931 536 aa19.1■□□□□ 0.65
BRF1-215ENST00000549655 BMP1P13497 986 aa19.1■□□□□ 0.65
BRF1-215ENST00000549655 CALB2P22676 271 aa19.1■□□□□ 0.65
BRF1-215ENST00000549655 HMGCLP35914 325 aa19.1■□□□□ 0.65
BRF1-215ENST00000549655 PDAP1Q13442 181 aaKnown RBP19.1■□□□□ 0.65
BRF1-215ENST00000549655 ZNF77Q15935 545 aa19.1■□□□□ 0.65
BRF1-215ENST00000549655 TRIM67Q6ZTA4 783 aa19.1■□□□□ 0.65
BRF1-215ENST00000549655 ISCA2Q86U28 154 aa19.1■□□□□ 0.65
BRF1-215ENST00000549655 LSMEM2Q8N112 164 aa19.1■□□□□ 0.65
BRF1-215ENST00000549655 OR2AP1Q8NGE2 309 aa19.1■□□□□ 0.65
BRF1-215ENST00000549655 IRF7Q92985 503 aa19.1■□□□□ 0.65
BRF1-215ENST00000549655 CCDC126Q96EE4 140 aa19.1■□□□□ 0.65
BRF1-215ENST00000549655 LBHD1Q9BQE6 289 aaPredicted RBP19.1■□□□□ 0.65
BRF1-215ENST00000549655 CCDC68Q9H2F9 335 aa19.1■□□□□ 0.65
BRF1-215ENST00000549655 ALG9Q9H6U8 611 aa19.1■□□□□ 0.65
BRF1-215ENST00000549655 ATP13A3Q9H7F0 1226 aa19.1■□□□□ 0.65
BRF1-215ENST00000549655 NCKIPSDQ9NZQ3 722 aa19.1■□□□□ 0.65
BRF1-215ENST00000549655 VPS9D1Q9Y2B5 631 aa19.1■□□□□ 0.65
BRF1-215ENST00000549655 CXorf51AA0A1B0GTR3 108 aa19.09■□□□□ 0.65
BRF1-215ENST00000549655 RHOBTB1O94844 696 aa19.09■□□□□ 0.65
BRF1-215ENST00000549655 ESRRAP11474 423 aaPredicted RBP19.09■□□□□ 0.65
BRF1-215ENST00000549655 ZNF37AP17032 561 aaPredicted RBP19.09■□□□□ 0.65
BRF1-215ENST00000549655 KCNA5P22460 613 aa19.09■□□□□ 0.65
BRF1-215ENST00000549655 TTPAP49638 278 aa19.09■□□□□ 0.65
BRF1-215ENST00000549655 RPL14P50914 215 aaKnown RBP19.09■□□□□ 0.65
BRF1-215ENST00000549655 PRKAA1Q13131 559 aa19.09■□□□□ 0.65
BRF1-215ENST00000549655 EPGNQ6UW88 154 aa19.09■□□□□ 0.65
BRF1-215ENST00000549655 PIWIL4Q7Z3Z4 852 aaKnown RBP19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms