RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 SUOXP51687 545 aa13.43□□□□□ -0.26
PTCH1-215ENST00000547672 CCNHP51946 323 aaPredicted RBP13.43□□□□□ -0.26
PTCH1-215ENST00000547672 TAS2R39P59534 338 aa13.43□□□□□ -0.26
PTCH1-215ENST00000547672 CCDC15Q0P6D6 951 aa13.43□□□□□ -0.26
PTCH1-215ENST00000547672 SPDYAQ5MJ70 313 aa13.43□□□□□ -0.26
PTCH1-215ENST00000547672 CNSTQ6PJW8 725 aa13.43□□□□□ -0.26
PTCH1-215ENST00000547672 ZYG11AQ6WRX3 759 aa13.43□□□□□ -0.26
PTCH1-215ENST00000547672 OTOAQ7RTW8 1153 aa13.43□□□□□ -0.26
PTCH1-215ENST00000547672 TRPM8Q7Z2W7 1104 aa13.43□□□□□ -0.26
PTCH1-215ENST00000547672 SPRED2Q7Z698 418 aa13.43□□□□□ -0.26
PTCH1-215ENST00000547672 CMC1Q7Z7K0 106 aa13.43□□□□□ -0.26
PTCH1-215ENST00000547672 SLC22A9Q8IVM8 553 aa13.43□□□□□ -0.26
PTCH1-215ENST00000547672 HOMEZQ8IX15 550 aa13.43□□□□□ -0.26
PTCH1-215ENST00000547672 RAVER1Q8IY67 606 aaKnown RBP13.43□□□□□ -0.26
PTCH1-215ENST00000547672 NKAPQ8N5F7 415 aaKnown RBP13.43□□□□□ -0.26
PTCH1-215ENST00000547672 GDPD5Q8WTR4 605 aa13.43□□□□□ -0.26
PTCH1-215ENST00000547672 ECHDC3Q96DC8 303 aa13.43□□□□□ -0.26
PTCH1-215ENST00000547672 RPL10LQ96L21 214 aaKnown RBP13.43□□□□□ -0.26
PTCH1-215ENST00000547672 NOTCH4Q99466 2003 aa13.43□□□□□ -0.26
PTCH1-215ENST00000547672 TNKS2Q9H2K2 1166 aa13.43□□□□□ -0.26
PTCH1-215ENST00000547672 STN1Q9H668 368 aaKnown RBP13.43□□□□□ -0.26
PTCH1-215ENST00000547672 CAB39LQ9H9S4 337 aa13.43□□□□□ -0.26
PTCH1-215ENST00000547672 DKK3Q9UBP4 350 aa13.43□□□□□ -0.26
PTCH1-215ENST00000547672 TMCO1Q9UM00 188 aa13.43□□□□□ -0.26
PTCH1-215ENST00000547672 KCTD3Q9Y597 815 aa13.43□□□□□ -0.26
PTCH1-215ENST00000547672 C1orf232A0A0U1RR37 186 aa13.42□□□□□ -0.26
PTCH1-215ENST00000547672 RGSL1A5PLK6 1076 aa13.42□□□□□ -0.26
PTCH1-215ENST00000547672 SLCO1B7G3V0H7 640 aa13.42□□□□□ -0.26
PTCH1-215ENST00000547672 NRG2O14511 850 aaPredicted RBP13.42□□□□□ -0.26
PTCH1-215ENST00000547672 VPS26AO75436 327 aa13.42□□□□□ -0.26
PTCH1-215ENST00000547672 ZNF821O75541 412 aaPredicted RBP13.42□□□□□ -0.26
PTCH1-215ENST00000547672 SRP72O76094 671 aaKnown RBP13.42□□□□□ -0.26
PTCH1-215ENST00000547672 CISD3P0C7P0 127 aa13.42□□□□□ -0.26
PTCH1-215ENST00000547672 ZNF7P17097 686 aaPredicted RBP13.42□□□□□ -0.26
PTCH1-215ENST00000547672 XPAP23025 273 aaPredicted RBP13.42□□□□□ -0.26
PTCH1-215ENST00000547672 MC4RP32245 332 aa13.42□□□□□ -0.26
PTCH1-215ENST00000547672 EIF2DP41214 584 aaKnown RBP13.42□□□□□ -0.26
PTCH1-215ENST00000547672 ATP6V0D1P61421 351 aa13.42□□□□□ -0.26
PTCH1-215ENST00000547672 PDAP1Q13442 181 aaKnown RBP13.42□□□□□ -0.26
PTCH1-215ENST00000547672 CRY1Q16526 586 aa13.42□□□□□ -0.26
PTCH1-215ENST00000547672 ZRANB3Q5FWF4 1079 aa13.42□□□□□ -0.26
PTCH1-215ENST00000547672 C16orf46Q6P387 395 aa13.42□□□□□ -0.26
PTCH1-215ENST00000547672 TAS2R42Q7RTR8 314 aa13.42□□□□□ -0.26
PTCH1-215ENST00000547672 MFSD6LQ8IWD5 586 aa13.42□□□□□ -0.26
PTCH1-215ENST00000547672 TDHQ8IZJ6 230 aa13.42□□□□□ -0.26
PTCH1-215ENST00000547672 DTX3LQ8TDB6 740 aa13.42□□□□□ -0.26
PTCH1-215ENST00000547672 ULK4Q96C45 1275 aa13.42□□□□□ -0.26
PTCH1-215ENST00000547672 AARSD1Q9BTE6 412 aaKnown RBP13.42□□□□□ -0.26
PTCH1-215ENST00000547672 CIPCQ9C0C6 399 aa13.42□□□□□ -0.26
PTCH1-215ENST00000547672 ELOVL2Q9NXB9 296 aa13.42□□□□□ -0.26
PTCH1-215ENST00000547672 KCNK4Q9NYG8 393 aa13.42□□□□□ -0.26
PTCH1-215ENST00000547672 EMCNQ9ULC0 261 aa13.42□□□□□ -0.26
PTCH1-215ENST00000547672 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.42□□□□□ -0.26
PTCH1-215ENST00000547672 ANKRD36A6QL64 1941 aa13.41□□□□□ -0.26
PTCH1-215ENST00000547672 NPC1O15118 1278 aa13.41□□□□□ -0.26
PTCH1-215ENST00000547672 SNNO75324 88 aaPredicted RBP13.41□□□□□ -0.26
PTCH1-215ENST00000547672 RHOBTB1O94844 696 aa13.41□□□□□ -0.26
PTCH1-215ENST00000547672 PRNPP04156 253 aa13.41□□□□□ -0.26
PTCH1-215ENST00000547672 FDXRP22570 491 aa13.41□□□□□ -0.26
PTCH1-215ENST00000547672 ATP5F1P24539 256 aaPredicted RBP13.41□□□□□ -0.26
PTCH1-215ENST00000547672 HNF1BP35680 557 aa13.41□□□□□ -0.26
PTCH1-215ENST00000547672 CTSOP43234 321 aaPredicted RBP13.41□□□□□ -0.26
PTCH1-215ENST00000547672 SLC1A6P48664 564 aa13.41□□□□□ -0.26
PTCH1-215ENST00000547672 NUMBP49757 651 aa13.41□□□□□ -0.26
PTCH1-215ENST00000547672 ARFIP2P53365 341 aa13.41□□□□□ -0.26
PTCH1-215ENST00000547672 DNAJB13P59910 316 aa13.41□□□□□ -0.26
PTCH1-215ENST00000547672 BST1Q10588 318 aa13.41□□□□□ -0.26
PTCH1-215ENST00000547672 ADAM15Q13444 863 aa13.41□□□□□ -0.26
PTCH1-215ENST00000547672 ARHGEF7Q14155 803 aa13.41□□□□□ -0.26
PTCH1-215ENST00000547672 SMAD1Q15797 465 aaKnown RBP13.41□□□□□ -0.26
PTCH1-215ENST00000547672 LACTB2Q53H82 288 aaPredicted RBP13.41□□□□□ -0.26
PTCH1-215ENST00000547672 LIPMQ5VYY2 423 aa13.41□□□□□ -0.26
PTCH1-215ENST00000547672 ASTLQ6HA08 431 aaPredicted RBP13.41□□□□□ -0.26
PTCH1-215ENST00000547672 LRRC8EQ6NSJ5 796 aa13.41□□□□□ -0.26
PTCH1-215ENST00000547672 DPY19L3Q6ZPD9 716 aa13.41□□□□□ -0.26
PTCH1-215ENST00000547672 MTSS1LQ765P7 747 aa13.41□□□□□ -0.26
PTCH1-215ENST00000547672 GET4Q7L5D6 327 aaPredicted RBP13.41□□□□□ -0.26
PTCH1-215ENST00000547672 SNX20Q7Z614 316 aa13.41□□□□□ -0.26
PTCH1-215ENST00000547672 DSG4Q86SJ6 1040 aa13.41□□□□□ -0.26
PTCH1-215ENST00000547672 AFAP1L2Q8N4X5 818 aa13.41□□□□□ -0.26
PTCH1-215ENST00000547672 NAT16Q8N8M0 369 aa13.41□□□□□ -0.26
PTCH1-215ENST00000547672 ELSPBP1Q96BH3 223 aa13.41□□□□□ -0.26
PTCH1-215ENST00000547672 UBXN10Q96LJ8 280 aa13.41□□□□□ -0.26
PTCH1-215ENST00000547672 NECTIN4Q96NY8 510 aa13.41□□□□□ -0.26
PTCH1-215ENST00000547672 LRRC37BQ96QE4 947 aa13.41□□□□□ -0.26
PTCH1-215ENST00000547672 FAM83CQ9BQN1 747 aa13.41□□□□□ -0.26
PTCH1-215ENST00000547672 C1QTNF1Q9BXJ1 281 aa13.41□□□□□ -0.26
PTCH1-215ENST00000547672 WWP1Q9H0M0 922 aa13.41□□□□□ -0.26
PTCH1-215ENST00000547672 C12orf65Q9H3J6 166 aaKnown RBP13.41□□□□□ -0.26
PTCH1-215ENST00000547672 ZDHHC6Q9H6R6 413 aa13.41□□□□□ -0.26
PTCH1-215ENST00000547672 SUDS3Q9H7L9 328 aaPredicted RBP13.41□□□□□ -0.26
PTCH1-215ENST00000547672 ECT2Q9H8V3 914 aa13.41□□□□□ -0.26
PTCH1-215ENST00000547672 SLCO1B3Q9NPD5 702 aa13.41□□□□□ -0.26
PTCH1-215ENST00000547672 POLR3BQ9NW08 1133 aaPredicted RBP13.41□□□□□ -0.26
PTCH1-215ENST00000547672 OXSMQ9NWU1 459 aa13.41□□□□□ -0.26
PTCH1-215ENST00000547672 SUN2Q9UH99 717 aa13.41□□□□□ -0.26
PTCH1-215ENST00000547672 IL36AQ9UHA7 158 aa13.41□□□□□ -0.26
PTCH1-215ENST00000547672 SLCO3A1Q9UIG8 710 aa13.41□□□□□ -0.26
PTCH1-215ENST00000547672 APOBEC2Q9Y235 224 aaKnown RBP13.41□□□□□ -0.26
PTCH1-215ENST00000547672 UBA6A0AVT1 1052 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms