RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 DTX3LQ8TDB6 740 aa15.82■□□□□ 0.12
TRAFD1-203ENST00000547063 FBF1Q8TES7 1133 aa15.82■□□□□ 0.12
TRAFD1-203ENST00000547063 SCG3Q8WXD2 468 aaKnown RBP15.82■□□□□ 0.12
TRAFD1-203ENST00000547063 HDAC10Q969S8 669 aa15.82■□□□□ 0.12
TRAFD1-203ENST00000547063 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.82■□□□□ 0.12
TRAFD1-203ENST00000547063 CDKN2AIPNLQ96HQ2 116 aa15.82■□□□□ 0.12
TRAFD1-203ENST00000547063 FCRL3Q96P31 734 aaPredicted RBP15.82■□□□□ 0.12
TRAFD1-203ENST00000547063 SMIM14Q96QK8 99 aa15.82■□□□□ 0.12
TRAFD1-203ENST00000547063 RUFY1Q96T51 708 aa15.82■□□□□ 0.12
TRAFD1-203ENST00000547063 ACBD3Q9H3P7 528 aa15.82■□□□□ 0.12
TRAFD1-203ENST00000547063 PPANQ9NQ55 473 aaKnown RBP15.82■□□□□ 0.12
TRAFD1-203ENST00000547063 ITM2CQ9NQX7 267 aa15.82■□□□□ 0.12
TRAFD1-203ENST00000547063 ZFATQ9P243 1243 aa15.82■□□□□ 0.12
TRAFD1-203ENST00000547063 USP36Q9P275 1121 aaKnown RBP15.82■□□□□ 0.12
TRAFD1-203ENST00000547063 NFKBIL1Q9UBC1 381 aaPredicted RBP15.82■□□□□ 0.12
TRAFD1-203ENST00000547063 FETUBQ9UGM5 382 aa15.82■□□□□ 0.12
TRAFD1-203ENST00000547063 KCTD3Q9Y597 815 aa15.82■□□□□ 0.12
TRAFD1-203ENST00000547063 NCOR1O75376 2440 aa15.82■□□□□ 0.12
TRAFD1-203ENST00000547063 TMEM221A6NGB7 291 aa15.81■□□□□ 0.12
TRAFD1-203ENST00000547063 LRRC72A6NJI9 287 aa15.81■□□□□ 0.12
TRAFD1-203ENST00000547063 M0R296 226 aa15.81■□□□□ 0.12
TRAFD1-203ENST00000547063 PLK4O00444 970 aa15.81■□□□□ 0.12
TRAFD1-203ENST00000547063 PFDN6O15212 129 aa15.81■□□□□ 0.12
TRAFD1-203ENST00000547063 ATP8B1O43520 1251 aa15.81■□□□□ 0.12
TRAFD1-203ENST00000547063 PCDH8O95206 1070 aa15.81■□□□□ 0.12
TRAFD1-203ENST00000547063 IGLV3-19P01714 112 aa15.81■□□□□ 0.12
TRAFD1-203ENST00000547063 DCNP07585 359 aaKnown RBP15.81■□□□□ 0.12
TRAFD1-203ENST00000547063 PPARGP37231 505 aaPredicted RBP15.81■□□□□ 0.12
TRAFD1-203ENST00000547063 SPAM1P38567 509 aa15.81■□□□□ 0.12
TRAFD1-203ENST00000547063 SPINT3P49223 89 aa15.81■□□□□ 0.12
TRAFD1-203ENST00000547063 LIG3P49916 1009 aa15.81■□□□□ 0.12
TRAFD1-203ENST00000547063 TPMTP51580 245 aa15.81■□□□□ 0.12
TRAFD1-203ENST00000547063 DCDC1P59894 354 aa15.81■□□□□ 0.12
TRAFD1-203ENST00000547063 MTAPQ13126 283 aa15.81■□□□□ 0.12
TRAFD1-203ENST00000547063 ACOX1Q15067 660 aa15.81■□□□□ 0.12
TRAFD1-203ENST00000547063 PTPRRQ15256 657 aa15.81■□□□□ 0.12
TRAFD1-203ENST00000547063 CWF19L1Q69YN2 538 aaKnown RBP15.81■□□□□ 0.12
TRAFD1-203ENST00000547063 ANO7Q6IWH7 933 aa15.81■□□□□ 0.12
TRAFD1-203ENST00000547063 KIAA1161Q6NSJ0 714 aa15.81■□□□□ 0.12
TRAFD1-203ENST00000547063 MRNIPQ6NTE8 343 aa15.81■□□□□ 0.12
TRAFD1-203ENST00000547063 LRIG3Q6UXM1 1119 aa15.81■□□□□ 0.12
TRAFD1-203ENST00000547063 CYP2U1Q7Z449 544 aa15.81■□□□□ 0.12
TRAFD1-203ENST00000547063 RASSF3Q86WH2 238 aa15.81■□□□□ 0.12
TRAFD1-203ENST00000547063 OR14C36Q8NHC7 312 aa15.81■□□□□ 0.12
TRAFD1-203ENST00000547063 TBATAQ96M53 351 aa15.81■□□□□ 0.12
TRAFD1-203ENST00000547063 TRIM56Q9BRZ2 755 aaKnown RBP15.81■□□□□ 0.12
TRAFD1-203ENST00000547063 BTBD1Q9H0C5 482 aa15.81■□□□□ 0.12
TRAFD1-203ENST00000547063 SLC6A17Q9H1V8 727 aa15.81■□□□□ 0.12
TRAFD1-203ENST00000547063 EPB41L4BQ9H329 900 aa15.81■□□□□ 0.12
TRAFD1-203ENST00000547063 PLAC1Q9HBJ0 212 aa15.81■□□□□ 0.12
TRAFD1-203ENST00000547063 SGK2Q9HBY8 427 aa15.81■□□□□ 0.12
TRAFD1-203ENST00000547063 SLC2A6Q9UGQ3 507 aa15.81■□□□□ 0.12
TRAFD1-203ENST00000547063 RABGEF1Q9UJ41 708 aa15.81■□□□□ 0.12
TRAFD1-203ENST00000547063 PLAAQ9Y263 795 aa15.81■□□□□ 0.12
TRAFD1-203ENST00000547063 IKBKGQ9Y6K9 419 aa15.81■□□□□ 0.12
TRAFD1-203ENST00000547063 SLC30A1Q9Y6M5 507 aa15.81■□□□□ 0.12
TRAFD1-203ENST00000547063 UNC80Q8N2C7 3258 aa15.8■□□□□ 0.12
TRAFD1-203ENST00000547063 EXOC1LA0A1B0GW35 172 aa15.8■□□□□ 0.12
TRAFD1-203ENST00000547063 FAM159BA6NKW6 160 aa15.8■□□□□ 0.12
TRAFD1-203ENST00000547063 WNT9AO14904 365 aa15.8■□□□□ 0.12
TRAFD1-203ENST00000547063 SPINT1O43278 529 aa15.8■□□□□ 0.12
TRAFD1-203ENST00000547063 BUD23O43709 281 aaKnown RBP15.8■□□□□ 0.12
TRAFD1-203ENST00000547063 LZTS3O60299 673 aaPredicted RBP15.8■□□□□ 0.12
TRAFD1-203ENST00000547063 C1SP09871 688 aa15.8■□□□□ 0.12
TRAFD1-203ENST00000547063 ARCN1P48444 511 aaKnown RBP15.8■□□□□ 0.12
TRAFD1-203ENST00000547063 RPS21P63220 83 aaKnown RBP15.8■□□□□ 0.12
TRAFD1-203ENST00000547063 TMPRSS15P98073 1019 aa15.8■□□□□ 0.12
TRAFD1-203ENST00000547063 KBTBD12Q3ZCT8 623 aa15.8■□□□□ 0.12
TRAFD1-203ENST00000547063 AARS2Q5JTZ9 985 aaKnown RBP15.8■□□□□ 0.12
TRAFD1-203ENST00000547063 NEPROQ6NW34 567 aa15.8■□□□□ 0.12
TRAFD1-203ENST00000547063 ZNF765Q7L2R6 523 aa15.8■□□□□ 0.12
TRAFD1-203ENST00000547063 SDCCAG8Q86SQ7 713 aaPredicted RBP15.8■□□□□ 0.12
TRAFD1-203ENST00000547063 LRRC6Q86X45 466 aa15.8■□□□□ 0.12
TRAFD1-203ENST00000547063 IQCKQ8N0W5 287 aa15.8■□□□□ 0.12
TRAFD1-203ENST00000547063 OR4L1Q8NH43 312 aa15.8■□□□□ 0.12
TRAFD1-203ENST00000547063 EID2BQ96D98 161 aa15.8■□□□□ 0.12
TRAFD1-203ENST00000547063 HHIPQ96QV1 700 aa15.8■□□□□ 0.12
TRAFD1-203ENST00000547063 TTC1Q99614 292 aa15.8■□□□□ 0.12
TRAFD1-203ENST00000547063 WRAP53Q9BUR4 548 aaKnown RBP15.8■□□□□ 0.12
TRAFD1-203ENST00000547063 C1QTNF7Q9BXJ2 289 aa15.8■□□□□ 0.12
TRAFD1-203ENST00000547063 ROPN1BQ9BZX4 212 aaPredicted RBP15.8■□□□□ 0.12
TRAFD1-203ENST00000547063 FAM83DQ9H4H8 585 aa15.8■□□□□ 0.12
TRAFD1-203ENST00000547063 ROPN1Q9HAT0 212 aaPredicted RBP15.8■□□□□ 0.12
TRAFD1-203ENST00000547063 BPIFA1Q9NP55 256 aa15.8■□□□□ 0.12
TRAFD1-203ENST00000547063 VPS18Q9P253 973 aa15.8■□□□□ 0.12
TRAFD1-203ENST00000547063 TXNDC16Q9P2K2 825 aa15.8■□□□□ 0.12
TRAFD1-203ENST00000547063 SERGEFQ9UGK8 458 aa15.8■□□□□ 0.12
TRAFD1-203ENST00000547063 EBF1Q9UH73 591 aa15.8■□□□□ 0.12
TRAFD1-203ENST00000547063 FKBPLQ9UIM3 349 aa15.8■□□□□ 0.12
TRAFD1-203ENST00000547063 ITM2BQ9Y287 266 aa15.8■□□□□ 0.12
TRAFD1-203ENST00000547063 TBC1D3DA0A087WVF3 549 aa15.79■□□□□ 0.12
TRAFD1-203ENST00000547063 TBC1D3IA0A087WXS9 549 aa15.79■□□□□ 0.12
TRAFD1-203ENST00000547063 TBC1D3EA0A087X179 549 aa15.79■□□□□ 0.12
TRAFD1-203ENST00000547063 TBC1D3KA0A087X1G2 549 aa15.79■□□□□ 0.12
TRAFD1-203ENST00000547063 GLYATL1P3A0A0U1RQE8 302 aa15.79■□□□□ 0.12
TRAFD1-203ENST00000547063 CCDC162PA2VCL2 907 aa15.79■□□□□ 0.12
TRAFD1-203ENST00000547063 TBC1D3FA6NER0 549 aaPredicted RBP15.79■□□□□ 0.12
TRAFD1-203ENST00000547063 TBC1D3LB9A6J9 549 aa15.79■□□□□ 0.12
TRAFD1-203ENST00000547063 TCEA3O75764 348 aa15.79■□□□□ 0.12
TRAFD1-203ENST00000547063 TM7SF2O76062 418 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms