RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 NLRP8Q86W28 1048 aa15.88■□□□□ 0.13
DDX54-204ENST00000546898 TMPRSS12Q86WS5 348 aa15.88■□□□□ 0.13
DDX54-204ENST00000546898 HID1Q8IV36 788 aa15.88■□□□□ 0.13
DDX54-204ENST00000546898 CCDC112Q8NEF3 446 aa15.88■□□□□ 0.13
DDX54-204ENST00000546898 GLMNQ92990 594 aa15.88■□□□□ 0.13
DDX54-204ENST00000546898 TADA1Q96BN2 335 aa15.88■□□□□ 0.13
DDX54-204ENST00000546898 PDXPQ96GD0 296 aa15.88■□□□□ 0.13
DDX54-204ENST00000546898 RBM15Q96T37 977 aaKnown RBP eCLIP15.88■□□□□ 0.13
DDX54-204ENST00000546898 MLPHQ9BV36 600 aaPredicted RBP15.88■□□□□ 0.13
DDX54-204ENST00000546898 GLOD4Q9HC38 313 aa15.88■□□□□ 0.13
DDX54-204ENST00000546898 AMFRQ9UKV5 643 aa15.88■□□□□ 0.13
DDX54-204ENST00000546898 MACROD2A1Z1Q3 448 aa15.87■□□□□ 0.13
DDX54-204ENST00000546898 TMEM202A6NGA9 273 aa15.87■□□□□ 0.13
DDX54-204ENST00000546898 C1QTNF9BB2RNN3 333 aa15.87■□□□□ 0.13
DDX54-204ENST00000546898 GCATO75600 419 aa15.87■□□□□ 0.13
DDX54-204ENST00000546898 TNFP01375 233 aa15.87■□□□□ 0.13
DDX54-204ENST00000546898 GP1BAP07359 652 aa15.87■□□□□ 0.13
DDX54-204ENST00000546898 C1QTNF9P0C862 333 aa15.87■□□□□ 0.13
DDX54-204ENST00000546898 CTSEP14091 401 aa15.87■□□□□ 0.13
DDX54-204ENST00000546898 STC1P52823 247 aa15.87■□□□□ 0.13
DDX54-204ENST00000546898 E2F1Q01094 437 aa15.87■□□□□ 0.13
DDX54-204ENST00000546898 PTSQ03393 145 aa15.87■□□□□ 0.13
DDX54-204ENST00000546898 WASHC5Q12768 1159 aa15.87■□□□□ 0.13
DDX54-204ENST00000546898 NOMO1Q15155 1222 aa15.87■□□□□ 0.13
DDX54-204ENST00000546898 PTPRRQ15256 657 aa15.87■□□□□ 0.13
DDX54-204ENST00000546898 QPCTQ16769 361 aa15.87■□□□□ 0.13
DDX54-204ENST00000546898 DEFB133Q30KQ1 61 aa15.87■□□□□ 0.13
DDX54-204ENST00000546898 C6orf132Q5T0Z8 1188 aa15.87■□□□□ 0.13
DDX54-204ENST00000546898 CCDC181Q5TID7 509 aa15.87■□□□□ 0.13
DDX54-204ENST00000546898 RAET1GQ6H3X3 334 aa15.87■□□□□ 0.13
DDX54-204ENST00000546898 LVRNQ6Q4G3 990 aa15.87■□□□□ 0.13
DDX54-204ENST00000546898 PEX26Q7Z412 305 aa15.87■□□□□ 0.13
DDX54-204ENST00000546898 ZC3H18Q86VM9 953 aaKnown RBP15.87■□□□□ 0.13
DDX54-204ENST00000546898 HEATR4Q86WZ0 1026 aa15.87■□□□□ 0.13
DDX54-204ENST00000546898 NRSN1Q8IZ57 195 aa15.87■□□□□ 0.13
DDX54-204ENST00000546898 PELI3Q8N2H9 469 aa15.87■□□□□ 0.13
DDX54-204ENST00000546898 UBL4BQ8N7F7 174 aa15.87■□□□□ 0.13
DDX54-204ENST00000546898 HTR3CQ8WXA8 447 aa15.87■□□□□ 0.13
DDX54-204ENST00000546898 TSACCQ96A04 125 aaPredicted RBP15.87■□□□□ 0.13
DDX54-204ENST00000546898 HAUS1Q96CS2 278 aa15.87■□□□□ 0.13
DDX54-204ENST00000546898 TRIB3Q96RU7 358 aa15.87■□□□□ 0.13
DDX54-204ENST00000546898 BOCQ9BWV1 1114 aa15.87■□□□□ 0.13
DDX54-204ENST00000546898 TEX101Q9BY14 249 aa15.87■□□□□ 0.13
DDX54-204ENST00000546898 OSBPL8Q9BZF1 889 aa15.87■□□□□ 0.13
DDX54-204ENST00000546898 TSGA10Q9BZW7 698 aa15.87■□□□□ 0.13
DDX54-204ENST00000546898 CLPBQ9H078 707 aa15.87■□□□□ 0.13
DDX54-204ENST00000546898 FGF22Q9HCT0 170 aa15.87■□□□□ 0.13
DDX54-204ENST00000546898 ZFC3H1O60293 1989 aaKnown RBP15.87■□□□□ 0.13
DDX54-204ENST00000546898 ASXL3Q9C0F0 2248 aa15.86■□□□□ 0.13
DDX54-204ENST00000546898 LY6G6EA0A0G2JKS1 128 aa15.86■□□□□ 0.13
DDX54-204ENST00000546898 ARHGAP6O43182 974 aa15.86■□□□□ 0.13
DDX54-204ENST00000546898 ZNF189O75820 626 aaPredicted RBP15.86■□□□□ 0.13
DDX54-204ENST00000546898 RPIAP49247 311 aa15.86■□□□□ 0.13
DDX54-204ENST00000546898 CDK18Q07002 472 aa15.86■□□□□ 0.13
DDX54-204ENST00000546898 C1orf61Q13536 156 aa15.86■□□□□ 0.13
DDX54-204ENST00000546898 B4GALNT4Q76KP1 1039 aa15.86■□□□□ 0.13
DDX54-204ENST00000546898 GKN2Q86XP6 184 aa15.86■□□□□ 0.13
DDX54-204ENST00000546898 CACTIN-AS1Q8N1I8 211 aa15.86■□□□□ 0.13
DDX54-204ENST00000546898 RNF10Q8N5U6 811 aaKnown RBP15.86■□□□□ 0.13
DDX54-204ENST00000546898 SCG3Q8WXD2 468 aaKnown RBP15.86■□□□□ 0.13
DDX54-204ENST00000546898 OR1E3Q8WZA6 343 aa15.86■□□□□ 0.13
DDX54-204ENST00000546898 AP2M1Q96CW1 435 aa15.86■□□□□ 0.13
DDX54-204ENST00000546898 SMIM14Q96QK8 99 aa15.86■□□□□ 0.13
DDX54-204ENST00000546898 FERMT1Q9BQL6 677 aa15.86■□□□□ 0.13
DDX54-204ENST00000546898 LGR4Q9BXB1 951 aa15.86■□□□□ 0.13
DDX54-204ENST00000546898 HEMGNQ9BXL5 484 aa15.86■□□□□ 0.13
DDX54-204ENST00000546898 ABCG8Q9H221 673 aa15.86■□□□□ 0.13
DDX54-204ENST00000546898 PKD2L2Q9NZM6 624 aa15.86■□□□□ 0.13
DDX54-204ENST00000546898 KLHL8Q9P2G9 620 aaPredicted RBP15.86■□□□□ 0.13
DDX54-204ENST00000546898 DOLKQ9UPQ8 538 aa15.86■□□□□ 0.13
DDX54-204ENST00000546898 U3KQA8 63 aa15.86■□□□□ 0.13
DDX54-204ENST00000546898 ARHGEF17Q96PE2 2063 aaPredicted RBP15.86■□□□□ 0.13
DDX54-204ENST00000546898 RP1P56715 2156 aa15.86■□□□□ 0.13
DDX54-204ENST00000546898 SPEGQ15772 3267 aa15.85■□□□□ 0.13
DDX54-204ENST00000546898 KMT2BQ9UMN6 2715 aaPredicted RBP15.85■□□□□ 0.13
DDX54-204ENST00000546898 C1orf232A0A0U1RR37 186 aa15.85■□□□□ 0.13
DDX54-204ENST00000546898 PRSS38A1L453 326 aa15.85■□□□□ 0.13
DDX54-204ENST00000546898 RGSL1A5PLK6 1076 aa15.85■□□□□ 0.13
DDX54-204ENST00000546898 GOLGA6CA6NDK9 693 aa15.85■□□□□ 0.13
DDX54-204ENST00000546898 GOLGA6BA6NDN3 693 aa15.85■□□□□ 0.13
DDX54-204ENST00000546898 YY2O15391 372 aa15.85■□□□□ 0.13
DDX54-204ENST00000546898 CLDN7O95471 211 aa15.85■□□□□ 0.13
DDX54-204ENST00000546898 GOLGA6DP0CG33 693 aa15.85■□□□□ 0.13
DDX54-204ENST00000546898 NFKB1P19838 968 aa15.85■□□□□ 0.13
DDX54-204ENST00000546898 GPR1P46091 355 aa15.85■□□□□ 0.13
DDX54-204ENST00000546898 CDK3Q00526 305 aa15.85■□□□□ 0.13
DDX54-204ENST00000546898 OTUD4Q01804 1114 aaKnown RBP15.85■□□□□ 0.13
DDX54-204ENST00000546898 GALNT3Q14435 633 aa15.85■□□□□ 0.13
DDX54-204ENST00000546898 ST3GAL2Q16842 350 aa15.85■□□□□ 0.13
DDX54-204ENST00000546898 HES3Q5TGS1 186 aa15.85■□□□□ 0.13
DDX54-204ENST00000546898 ADAMTSL4Q6UY14 1074 aa15.85■□□□□ 0.13
DDX54-204ENST00000546898 RD3Q7Z3Z2 195 aa15.85■□□□□ 0.13
DDX54-204ENST00000546898 CDKL3Q8IVW4 592 aaPredicted RBP15.85■□□□□ 0.13
DDX54-204ENST00000546898 KDF1Q8NAX2 398 aaPredicted RBP15.85■□□□□ 0.13
DDX54-204ENST00000546898 CCHCR1Q8TD31 782 aa15.85■□□□□ 0.13
DDX54-204ENST00000546898 UBE2Q2Q8WVN8 375 aa15.85■□□□□ 0.13
DDX54-204ENST00000546898 ALG3Q92685 438 aa15.85■□□□□ 0.13
DDX54-204ENST00000546898 SRPK1Q96SB4 655 aaKnown RBP15.85■□□□□ 0.13
DDX54-204ENST00000546898 HERPUD2Q9BSE4 406 aa15.85■□□□□ 0.13
DDX54-204ENST00000546898 FRMD8Q9BZ67 464 aaPredicted RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms