RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 TREX1Q9NSU2 369 aa14.2□□□□□ -0.14
SRP54-202ENST00000546080 GIMAP2Q9UG22 337 aa14.2□□□□□ -0.14
SRP54-202ENST00000546080 PCDHA9Q9Y5H5 950 aa14.2□□□□□ -0.14
SRP54-202ENST00000546080 TSC2P49815 1807 aa14.2□□□□□ -0.14
SRP54-202ENST00000546080 KRBA1A5PL33 1030 aa14.2□□□□□ -0.14
SRP54-202ENST00000546080 DFFAO00273 331 aa14.2□□□□□ -0.14
SRP54-202ENST00000546080 SPTLC1O15269 473 aa14.2□□□□□ -0.14
SRP54-202ENST00000546080 B4GAT1O43505 415 aa14.2□□□□□ -0.14
SRP54-202ENST00000546080 ABCB7O75027 752 aa14.2□□□□□ -0.14
SRP54-202ENST00000546080 MT-ND1P03886 318 aa14.2□□□□□ -0.14
SRP54-202ENST00000546080 FYNP06241 537 aa14.2□□□□□ -0.14
SRP54-202ENST00000546080 UMPSP11172 480 aa14.2□□□□□ -0.14
SRP54-202ENST00000546080 NCAM1P13591 858 aa14.2□□□□□ -0.14
SRP54-202ENST00000546080 NCK1P16333 377 aa14.2□□□□□ -0.14
SRP54-202ENST00000546080 EEF1DP29692 281 aaKnown RBP14.2□□□□□ -0.14
SRP54-202ENST00000546080 IREB2P48200 963 aaKnown RBP14.2□□□□□ -0.14
SRP54-202ENST00000546080 GSK3BP49841 420 aa14.2□□□□□ -0.14
SRP54-202ENST00000546080 MLLT10P55197 1068 aa14.2□□□□□ -0.14
SRP54-202ENST00000546080 YBX1P67809 324 aaKnown RBP14.2□□□□□ -0.14
SRP54-202ENST00000546080 ZNF789Q5FWF6 425 aa14.2□□□□□ -0.14
SRP54-202ENST00000546080 KIAA0408Q6ZU52 694 aa14.2□□□□□ -0.14
SRP54-202ENST00000546080 ARMCX2Q7L311 632 aa14.2□□□□□ -0.14
SRP54-202ENST00000546080 DEFB132Q7Z7B7 95 aa14.2□□□□□ -0.14
SRP54-202ENST00000546080 CCDC117Q8IWD4 279 aaPredicted RBP14.2□□□□□ -0.14
SRP54-202ENST00000546080 MICALL2Q8IY33 904 aa14.2□□□□□ -0.14
SRP54-202ENST00000546080 KCTD13Q8WZ19 329 aa14.2□□□□□ -0.14
SRP54-202ENST00000546080 DPF3Q92784 378 aa14.2□□□□□ -0.14
SRP54-202ENST00000546080 L3HYPDHQ96EM0 354 aa14.2□□□□□ -0.14
SRP54-202ENST00000546080 MAGED4Q96JG8 741 aa14.2□□□□□ -0.14
SRP54-202ENST00000546080 CCDC138Q96M89 665 aa14.2□□□□□ -0.14
SRP54-202ENST00000546080 MUS81Q96NY9 551 aa14.2□□□□□ -0.14
SRP54-202ENST00000546080 FCRL5Q96RD9 977 aa14.2□□□□□ -0.14
SRP54-202ENST00000546080 CAMKK2Q96RR4 588 aa14.2□□□□□ -0.14
SRP54-202ENST00000546080 MED10Q9BTT4 135 aa14.2□□□□□ -0.14
SRP54-202ENST00000546080 FSD1LQ9BXM9 530 aa14.2□□□□□ -0.14
SRP54-202ENST00000546080 TRIM54Q9BYV2 358 aa14.2□□□□□ -0.14
SRP54-202ENST00000546080 ULBP1Q9BZM6 244 aa14.2□□□□□ -0.14
SRP54-202ENST00000546080 GPRC5DQ9NZD1 345 aa14.2□□□□□ -0.14
SRP54-202ENST00000546080 GMIPQ9P107 970 aa14.2□□□□□ -0.14
SRP54-202ENST00000546080 DSEQ9UL01 958 aa14.2□□□□□ -0.14
SRP54-202ENST00000546080 UBQLN1Q9UMX0 589 aaKnown RBP14.2□□□□□ -0.14
SRP54-202ENST00000546080 PTGDR2Q9Y5Y4 395 aa14.2□□□□□ -0.14
SRP54-202ENST00000546080 RALGAPA2Q2PPJ7 1873 aa14.19□□□□□ -0.14
SRP54-202ENST00000546080 PIP5K1BO14986 540 aa14.19□□□□□ -0.14
SRP54-202ENST00000546080 SYNCRIPO60506 623 aaKnown RBP14.19□□□□□ -0.14
SRP54-202ENST00000546080 CAPN15O75808 1086 aa14.19□□□□□ -0.14
SRP54-202ENST00000546080 LRIG2O94898 1065 aa14.19□□□□□ -0.14
SRP54-202ENST00000546080 AXLP30530 894 aa14.19□□□□□ -0.14
SRP54-202ENST00000546080 SOX11P35716 441 aa14.19□□□□□ -0.14
SRP54-202ENST00000546080 GEMP55040 296 aa14.19□□□□□ -0.14
SRP54-202ENST00000546080 NFYCQ13952 458 aa14.19□□□□□ -0.14
SRP54-202ENST00000546080 GRB7Q14451 532 aa14.19□□□□□ -0.14
SRP54-202ENST00000546080 ZNF846Q147U1 533 aa14.19□□□□□ -0.14
SRP54-202ENST00000546080 ZIK1Q3SY52 487 aaPredicted RBP14.19□□□□□ -0.14
SRP54-202ENST00000546080 UGT3A2Q3SY77 523 aa14.19□□□□□ -0.14
SRP54-202ENST00000546080 UNC50Q53HI1 259 aa14.19□□□□□ -0.14
SRP54-202ENST00000546080 LDLRAP1Q5SW96 308 aa14.19□□□□□ -0.14
SRP54-202ENST00000546080 FRA10AC1Q70Z53 315 aa14.19□□□□□ -0.14
SRP54-202ENST00000546080 PAPD5Q8NDF8 572 aaKnown RBP14.19□□□□□ -0.14
SRP54-202ENST00000546080 PDZD8Q8NEN9 1154 aa14.19□□□□□ -0.14
SRP54-202ENST00000546080 DNAJB14Q8TBM8 379 aa14.19□□□□□ -0.14
SRP54-202ENST00000546080 TWIST2Q8WVJ9 160 aa14.19□□□□□ -0.14
SRP54-202ENST00000546080 ANKRD49Q8WVL7 239 aa14.19□□□□□ -0.14
SRP54-202ENST00000546080 TMEM125Q96AQ2 219 aa14.19□□□□□ -0.14
SRP54-202ENST00000546080 ZNF347Q96SE7 839 aa14.19□□□□□ -0.14
SRP54-202ENST00000546080 SLC30A3Q99726 388 aa14.19□□□□□ -0.14
SRP54-202ENST00000546080 BDH2Q9BUT1 245 aa14.19□□□□□ -0.14
SRP54-202ENST00000546080 GLOD4Q9HC38 313 aa14.19□□□□□ -0.14
SRP54-202ENST00000546080 OR12D3Q9UGF7 316 aa14.19□□□□□ -0.14
SRP54-202ENST00000546080 GJD2Q9UKL4 321 aa14.19□□□□□ -0.14
SRP54-202ENST00000546080 DNAJC15Q9Y5T4 150 aa14.19□□□□□ -0.14
SRP54-202ENST00000546080 GPC6Q9Y625 555 aaPredicted RBP14.19□□□□□ -0.14
SRP54-202ENST00000546080 CPQQ9Y646 472 aa14.19□□□□□ -0.14
SRP54-202ENST00000546080 V9GYQ6 96 aa14.19□□□□□ -0.14
SRP54-202ENST00000546080 HUS1O60921 280 aa14.19□□□□□ -0.14
SRP54-202ENST00000546080 MATN4O95460 622 aa14.19□□□□□ -0.14
SRP54-202ENST00000546080 LGALS2P05162 132 aa14.19□□□□□ -0.14
SRP54-202ENST00000546080 OPRL1P41146 370 aa14.19□□□□□ -0.14
SRP54-202ENST00000546080 CHRNA4P43681 627 aa14.19□□□□□ -0.14
SRP54-202ENST00000546080 CDH13P55290 713 aa14.19□□□□□ -0.14
SRP54-202ENST00000546080 MAP3K7CLP57077 242 aa14.19□□□□□ -0.14
SRP54-202ENST00000546080 OCA2Q04671 838 aa14.19□□□□□ -0.14
SRP54-202ENST00000546080 LIPEQ05469 1076 aa14.19□□□□□ -0.14
SRP54-202ENST00000546080 CD300CQ08708 224 aa14.19□□□□□ -0.14
SRP54-202ENST00000546080 AASDHQ4L235 1098 aaPredicted RBP14.19□□□□□ -0.14
SRP54-202ENST00000546080 COQ5Q5HYK3 327 aa14.19□□□□□ -0.14
SRP54-202ENST00000546080 OTUD3Q5T2D3 398 aaPredicted RBP14.19□□□□□ -0.14
SRP54-202ENST00000546080 HECTD2Q5U5R9 776 aa14.19□□□□□ -0.14
SRP54-202ENST00000546080 XAF1Q6GPH4 301 aa14.19□□□□□ -0.14
SRP54-202ENST00000546080 TBPL2Q6SJ96 375 aa14.19□□□□□ -0.14
SRP54-202ENST00000546080 CLEC20AQ6ZU45 233 aa14.19□□□□□ -0.14
SRP54-202ENST00000546080 SCAIQ8N9R8 606 aa14.19□□□□□ -0.14
SRP54-202ENST00000546080 GABPB2Q8TAK5 448 aaPredicted RBP14.19□□□□□ -0.14
SRP54-202ENST00000546080 CALML6Q8TD86 181 aa14.19□□□□□ -0.14
SRP54-202ENST00000546080 CASP10Q92851 521 aa14.19□□□□□ -0.14
SRP54-202ENST00000546080 EXT2Q93063 718 aa14.19□□□□□ -0.14
SRP54-202ENST00000546080 KLRG1Q96E93 195 aa14.19□□□□□ -0.14
SRP54-202ENST00000546080 RPL10LQ96L21 214 aaKnown RBP14.19□□□□□ -0.14
SRP54-202ENST00000546080 CSF3RQ99062 836 aa14.19□□□□□ -0.14
SRP54-202ENST00000546080 SEPHS2Q99611 448 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms