RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 MAN1C1Q9NR34 630 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 TREX1Q9NSU2 369 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 GPRC5DQ9NZD1 345 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 ADA2Q9NZK5 511 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 ACTR3BQ9P1U1 418 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 XPR1Q9UBH6 696 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 ABCD2Q9UBJ2 740 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 ZDHHC2Q9UIJ5 367 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 CDH9Q9ULB4 789 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 MAGED2Q9UNF1 606 aaPredicted RBP6.49□□□□□ -1.37
SNHG1-225ENST00000545920 AP3M1Q9Y2T2 418 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 TNS1Q9HBL0 1735 aaKnown RBP6.49□□□□□ -1.37
SNHG1-225ENST00000545920 SMIM28A0A1B0GU29 152 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 H0YAE9 185 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 IFRD1O00458 451 aaPredicted RBP6.48□□□□□ -1.37
SNHG1-225ENST00000545920 MRASO14807 208 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 MATN3O15232 486 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 CFLARO15519 480 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 HTRA2O43464 458 aaPredicted RBP6.48□□□□□ -1.37
SNHG1-225ENST00000545920 NOL3O60936 208 aaKnown RBP6.48□□□□□ -1.37
SNHG1-225ENST00000545920 KATNA1O75449 491 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 RNASEH2AO75792 299 aaKnown RBP6.48□□□□□ -1.37
SNHG1-225ENST00000545920 RECQL4O94761 1208 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 AHSGP02765 367 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 CHRNGP07510 517 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 CPB1P15086 417 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 FASP25445 335 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 YY1P25490 414 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 PSMA4P25789 261 aaKnown RBP6.48□□□□□ -1.37
SNHG1-225ENST00000545920 HMOX2P30519 316 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 SLC5A2P31639 672 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 RPL9P32969 192 aaKnown RBP6.48□□□□□ -1.37
SNHG1-225ENST00000545920 ADRA1AP35348 466 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 MAGEA8P43361 318 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 RANBP1P43487 201 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 LILRA4P59901 499 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 IRF9Q00978 393 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 MS4A2Q01362 244 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 GRSF1Q12849 480 aaKnown RBP eCLIP6.48□□□□□ -1.37
SNHG1-225ENST00000545920 EPS8Q12929 822 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 MYBPC3Q14896 1274 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 MAPRE1Q15691 268 aaKnown RBP6.48□□□□□ -1.37
SNHG1-225ENST00000545920 ZNF792Q3KQV3 632 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 TECRLQ5HYJ1 363 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 NHSL2Q5HYW2 709 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 RPS26P11Q5JNZ5 115 aaPredicted RBP6.48□□□□□ -1.37
SNHG1-225ENST00000545920 IL23RQ5VWK5 629 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 SDE2Q6IQ49 451 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 OGFOD2Q6N063 350 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 NEPROQ6NW34 567 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 TAPT1Q6NXT6 567 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 ATG14Q6ZNE5 492 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 GADL1Q6ZQY3 521 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 CLEC20AQ6ZU45 233 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 LPCAT2Q7L5N7 544 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 SPATA19Q7Z5L4 167 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 RAB44Q7Z6P3 723 aaPredicted RBP6.48□□□□□ -1.37
SNHG1-225ENST00000545920 CDR2LQ86X02 465 aaPredicted RBP6.48□□□□□ -1.37
SNHG1-225ENST00000545920 HERC6Q8IVU3 1022 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 FBXO16Q8IX29 292 aaPredicted RBP6.48□□□□□ -1.37
SNHG1-225ENST00000545920 TBC1D21Q8IYX1 336 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 CLYBLQ8N0X4 340 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 GPC2Q8N158 579 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 PYROXD2Q8N2H3 581 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 ATPAF2Q8N5M1 289 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 PAPD5Q8NDF8 572 aaKnown RBP6.48□□□□□ -1.37
SNHG1-225ENST00000545920 RHEBL1Q8TAI7 183 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 ZSCAN18Q8TBC5 510 aaPredicted RBP6.48□□□□□ -1.37
SNHG1-225ENST00000545920 FNDC8Q8TC99 324 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 OSCP1Q8WVF1 389 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 KCTD4Q8WVF5 259 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 SEPT8Q92599 483 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 LPGAT1Q92604 370 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 BORCS5Q969J3 196 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 ATP6V1E2Q96A05 226 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 MFSD3Q96ES6 412 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 NRBF2Q96F24 287 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 SMARCD1Q96GM5 515 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 CENPNQ96H22 339 aaPredicted RBP6.48□□□□□ -1.37
SNHG1-225ENST00000545920 ZMAT2Q96NC0 199 aaKnown RBP6.48□□□□□ -1.37
SNHG1-225ENST00000545920 GPATCH1Q9BRR8 931 aaKnown RBP6.48□□□□□ -1.37
SNHG1-225ENST00000545920 TMEM79Q9BSE2 394 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 NUSAP1Q9BXS6 441 aaKnown RBP6.48□□□□□ -1.37
SNHG1-225ENST00000545920 WDCPQ9H6R7 721 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 COQ10BQ9H8M1 238 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 CSNK1G1Q9HCP0 422 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 CHRAC1Q9NRG0 131 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 ENAMQ9NRM1 1142 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 PIGVQ9NUD9 493 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 TBC1D23Q9NUY8 699 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 OLAHQ9NV23 265 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 DDX18Q9NVP1 670 aaKnown RBP6.48□□□□□ -1.37
SNHG1-225ENST00000545920 DZANK1Q9NVP4 752 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 ARHGEF38Q9NXL2 777 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 GIN1Q9NXP7 522 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 TUBGCP4Q9UGJ1 667 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 FBXO5Q9UKT4 447 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 DSEQ9UL01 958 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 B3GNT3Q9Y2A9 372 aa6.48□□□□□ -1.37
SNHG1-225ENST00000545920 A0A0J9YVX5 310 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms