RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 PDPRQ8NCN5 879 aa8.75□□□□□ -1.01
TDP1-204ENST00000545686 TBC1D15Q8TC07 691 aa8.75□□□□□ -1.01
TDP1-204ENST00000545686 DQX1Q8TE96 717 aaKnown RBP8.75□□□□□ -1.01
TDP1-204ENST00000545686 OSCP1Q8WVF1 389 aa8.75□□□□□ -1.01
TDP1-204ENST00000545686 ANKRD49Q8WVL7 239 aa8.75□□□□□ -1.01
TDP1-204ENST00000545686 EDEM1Q92611 657 aa8.75□□□□□ -1.01
TDP1-204ENST00000545686 RNF34Q969K3 372 aa8.75□□□□□ -1.01
TDP1-204ENST00000545686 HDAC10Q969S8 669 aa8.75□□□□□ -1.01
TDP1-204ENST00000545686 SENP8Q96LD8 212 aa8.75□□□□□ -1.01
TDP1-204ENST00000545686 C3orf30Q96M34 536 aa8.75□□□□□ -1.01
TDP1-204ENST00000545686 CCDC68Q9H2F9 335 aa8.75□□□□□ -1.01
TDP1-204ENST00000545686 RNF39Q9H2S5 420 aa8.75□□□□□ -1.01
TDP1-204ENST00000545686 ALG9Q9H6U8 611 aa8.75□□□□□ -1.01
TDP1-204ENST00000545686 FBRSL1Q9HCM7 1045 aaKnown RBP8.75□□□□□ -1.01
TDP1-204ENST00000545686 SLC38A7Q9NVC3 462 aa8.75□□□□□ -1.01
TDP1-204ENST00000545686 RBM22Q9NW64 420 aaKnown RBP eCLIP8.75□□□□□ -1.01
TDP1-204ENST00000545686 CMTM6Q9NX76 183 aa8.75□□□□□ -1.01
TDP1-204ENST00000545686 PKD2L2Q9NZM6 624 aa8.75□□□□□ -1.01
TDP1-204ENST00000545686 DNAJC15Q9Y5T4 150 aa8.75□□□□□ -1.01
TDP1-204ENST00000545686 TDRD15B5MCY1 1934 aaKnown RBP8.75□□□□□ -1.01
TDP1-204ENST00000545686 TCRBV5S2A0A599 114 aa8.75□□□□□ -1.01
TDP1-204ENST00000545686 AZIN1O14977 448 aa8.75□□□□□ -1.01
TDP1-204ENST00000545686 PORP16435 677 aaPredicted RBP8.75□□□□□ -1.01
TDP1-204ENST00000545686 JUNBP17275 347 aaPredicted RBP8.75□□□□□ -1.01
TDP1-204ENST00000545686 LBPP18428 481 aa8.75□□□□□ -1.01
TDP1-204ENST00000545686 VARSP26640 1264 aaKnown RBP8.75□□□□□ -1.01
TDP1-204ENST00000545686 TPP2P29144 1249 aaPredicted RBP8.75□□□□□ -1.01
TDP1-204ENST00000545686 CHRNA4P43681 627 aa8.75□□□□□ -1.01
TDP1-204ENST00000545686 RPS9P46781 194 aaKnown RBP8.75□□□□□ -1.01
TDP1-204ENST00000545686 SLC5A3P53794 718 aa8.75□□□□□ -1.01
TDP1-204ENST00000545686 TMBIM6P55061 237 aa8.75□□□□□ -1.01
TDP1-204ENST00000545686 WNT3AP56704 352 aa8.75□□□□□ -1.01
TDP1-204ENST00000545686 NAA20P61599 178 aa8.75□□□□□ -1.01
TDP1-204ENST00000545686 PMS2P3Q13401 168 aa8.75□□□□□ -1.01
TDP1-204ENST00000545686 MOGQ16653 247 aa8.75□□□□□ -1.01
TDP1-204ENST00000545686 SLC44A4Q53GD3 710 aa8.75□□□□□ -1.01
TDP1-204ENST00000545686 CYBRD1Q53TN4 286 aa8.75□□□□□ -1.01
TDP1-204ENST00000545686 ZNF789Q5FWF6 425 aa8.75□□□□□ -1.01
TDP1-204ENST00000545686 CCNYL2Q5T2Q4 361 aa8.75□□□□□ -1.01
TDP1-204ENST00000545686 OGFOD2Q6N063 350 aa8.75□□□□□ -1.01
TDP1-204ENST00000545686 BLOC1S3Q6QNY0 202 aa8.75□□□□□ -1.01
TDP1-204ENST00000545686 DCP1BQ8IZD4 617 aaKnown RBP8.75□□□□□ -1.01
TDP1-204ENST00000545686 GPC2Q8N158 579 aa8.75□□□□□ -1.01
TDP1-204ENST00000545686 SMG8Q8ND04 991 aaKnown RBP8.75□□□□□ -1.01
TDP1-204ENST00000545686 OR6J1Q8NGC5 347 aa8.75□□□□□ -1.01
TDP1-204ENST00000545686 RHEBL1Q8TAI7 183 aa8.75□□□□□ -1.01
TDP1-204ENST00000545686 FAM110BQ8TC76 370 aa8.75□□□□□ -1.01
TDP1-204ENST00000545686 GIPC3Q8TF64 312 aa8.75□□□□□ -1.01
TDP1-204ENST00000545686 TWIST2Q8WVJ9 160 aa8.75□□□□□ -1.01
TDP1-204ENST00000545686 CYGBQ8WWM9 190 aa8.75□□□□□ -1.01
TDP1-204ENST00000545686 DCUN1D5Q9BTE7 237 aa8.75□□□□□ -1.01
TDP1-204ENST00000545686 SLC39A8Q9C0K1 460 aa8.75□□□□□ -1.01
TDP1-204ENST00000545686 TMEM30AQ9NV96 361 aa8.75□□□□□ -1.01
TDP1-204ENST00000545686 TMEM45AQ9NWC5 275 aa8.75□□□□□ -1.01
TDP1-204ENST00000545686 GNPTGQ9UJJ9 305 aa8.75□□□□□ -1.01
TDP1-204ENST00000545686 ANAPC2Q9UJX6 822 aa8.75□□□□□ -1.01
TDP1-204ENST00000545686 PLXNA3P51805 1871 aa8.75□□□□□ -1.01
TDP1-204ENST00000545686 ATP6AP2A0A1C7CYW4 349 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 MYBPHLA2RUH7 354 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 MROH6A6NGR9 719 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 EI24O14681 340 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 PTGESO14684 152 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 IRAK2O43187 625 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 ATP6AP2O75787 350 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 BAIAP3O94812 1187 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 CDK14O94921 469 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 SMIM10L2AP0DMW4 78 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 SMIM10L2BP0DMW5 78 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 PCSK1P29120 753 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 OXTRP30559 389 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 EEFSECP57772 596 aaKnown RBP8.74□□□□□ -1.01
TDP1-204ENST00000545686 PHEXP78562 749 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 NRG1Q02297 640 aaPredicted RBP8.74□□□□□ -1.01
TDP1-204ENST00000545686 TUBA3CQ13748 450 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 FXNQ16595 210 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 FSCN1Q16658 493 aaKnown RBP8.74□□□□□ -1.01
TDP1-204ENST00000545686 PDCD4Q53EL6 469 aaKnown RBP8.74□□□□□ -1.01
TDP1-204ENST00000545686 FAM43BQ6ZT52 329 aaPredicted RBP8.74□□□□□ -1.01
TDP1-204ENST00000545686 RPS27LQ71UM5 84 aaKnown RBP8.74□□□□□ -1.01
TDP1-204ENST00000545686 SPATA19Q7Z5L4 167 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 SULF1Q8IWU6 871 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 DDIASQ8IXT1 998 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.74□□□□□ -1.01
TDP1-204ENST00000545686 SNX31Q8N9S9 440 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 OR13J1Q8NGT2 312 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 SNRNP27Q8WVK2 155 aaKnown RBP8.74□□□□□ -1.01
TDP1-204ENST00000545686 TMEM125Q96AQ2 219 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 IMP4Q96G21 291 aaKnown RBP8.74□□□□□ -1.01
TDP1-204ENST00000545686 MUC3BQ9H195 1237 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 POLR1BQ9H9Y6 1135 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 SLC52A3Q9NQ40 469 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 GMPR2Q9P2T1 348 aaKnown RBP8.74□□□□□ -1.01
TDP1-204ENST00000545686 SFMBT1Q9UHJ3 866 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 SLC30A1Q9Y6M5 507 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 GREB1Q4ZG55 1949 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.74□□□□□ -1.01
TDP1-204ENST00000545686 A0A1W2PP18 115 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 FAM149AA5PLN7 773 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 GRXCR2A6NFK2 248 aa8.74□□□□□ -1.01
TDP1-204ENST00000545686 WASH4PA8MWX3 477 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms