RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 GCNT7Q6ZNI0 430 aa7.41□□□□□ -1.22
CPSF7-224ENST00000544990 Q6ZSR6 202 aa7.41□□□□□ -1.22
CPSF7-224ENST00000544990 PTAR1Q7Z6K3 402 aaPredicted RBP7.41□□□□□ -1.22
CPSF7-224ENST00000544990 GLRX5Q86SX6 157 aa7.41□□□□□ -1.22
CPSF7-224ENST00000544990 DAAM2Q86T65 1068 aa7.41□□□□□ -1.22
CPSF7-224ENST00000544990 KIAA1328Q86T90 577 aa7.41□□□□□ -1.22
CPSF7-224ENST00000544990 SPATS2Q86XZ4 545 aaKnown RBP7.41□□□□□ -1.22
CPSF7-224ENST00000544990 RFX6Q8HWS3 928 aa7.41□□□□□ -1.22
CPSF7-224ENST00000544990 RELL1Q8IUW5 271 aa7.41□□□□□ -1.22
CPSF7-224ENST00000544990 CCDC13Q8IYE1 715 aa7.41□□□□□ -1.22
CPSF7-224ENST00000544990 TEX26Q8N6G2 289 aa7.41□□□□□ -1.22
CPSF7-224ENST00000544990 PQLC3Q8N755 202 aa7.41□□□□□ -1.22
CPSF7-224ENST00000544990 SPC24Q8NBT2 197 aa7.41□□□□□ -1.22
CPSF7-224ENST00000544990 PDCD6IPQ8WUM4 868 aaKnown RBP7.41□□□□□ -1.22
CPSF7-224ENST00000544990 MAML1Q92585 1016 aa7.41□□□□□ -1.22
CPSF7-224ENST00000544990 FATE1Q969F0 183 aa7.41□□□□□ -1.22
CPSF7-224ENST00000544990 HDAC11Q96DB2 347 aa7.41□□□□□ -1.22
CPSF7-224ENST00000544990 ECHDC3Q96DC8 303 aa7.41□□□□□ -1.22
CPSF7-224ENST00000544990 BMFQ96LC9 184 aa7.41□□□□□ -1.22
CPSF7-224ENST00000544990 CNTNAP3BQ96NU0 1288 aa7.41□□□□□ -1.22
CPSF7-224ENST00000544990 CAMK1GQ96NX5 476 aa7.41□□□□□ -1.22
CPSF7-224ENST00000544990 KLF6Q99612 283 aaPredicted RBP7.41□□□□□ -1.22
CPSF7-224ENST00000544990 WRAP53Q9BUR4 548 aaKnown RBP7.41□□□□□ -1.22
CPSF7-224ENST00000544990 CNTNAP3Q9BZ76 1288 aa7.41□□□□□ -1.22
CPSF7-224ENST00000544990 POLR1EQ9GZS1 481 aaKnown RBP7.41□□□□□ -1.22
CPSF7-224ENST00000544990 BRD8Q9H0E9 1235 aa7.41□□□□□ -1.22
CPSF7-224ENST00000544990 NT5MQ9NPB1 228 aa7.41□□□□□ -1.22
CPSF7-224ENST00000544990 PCDH12Q9NPG4 1184 aa7.41□□□□□ -1.22
CPSF7-224ENST00000544990 RBM22Q9NW64 420 aaKnown RBP eCLIP7.41□□□□□ -1.221e-6■■■■□ 23.9
CPSF7-224ENST00000544990 KCTD5Q9NXV2 234 aa7.41□□□□□ -1.22
CPSF7-224ENST00000544990 FRRS1LQ9P0K9 344 aa7.41□□□□□ -1.22
CPSF7-224ENST00000544990 ANGPTL2Q9UKU9 493 aa7.41□□□□□ -1.22
CPSF7-224ENST00000544990 PHTF1Q9UMS5 762 aa7.41□□□□□ -1.22
CPSF7-224ENST00000544990 APOBEC2Q9Y235 224 aaKnown RBP7.41□□□□□ -1.22
CPSF7-224ENST00000544990 ATP8A1Q9Y2Q0 1164 aa7.41□□□□□ -1.22
CPSF7-224ENST00000544990 HYOU1Q9Y4L1 999 aa7.41□□□□□ -1.22
CPSF7-224ENST00000544990 HEY1Q9Y5J3 304 aa7.41□□□□□ -1.22
CPSF7-224ENST00000544990 POM121BA6NF01 834 aa7.4□□□□□ -1.22
CPSF7-224ENST00000544990 C3orf70A6NLC5 250 aaPredicted RBP7.4□□□□□ -1.22
CPSF7-224ENST00000544990 BTNL10A8MVZ5 291 aa7.4□□□□□ -1.22
CPSF7-224ENST00000544990 PPP1R12AO14974 1030 aaPredicted RBP7.4□□□□□ -1.22
CPSF7-224ENST00000544990 RAD51BO15315 384 aa7.4□□□□□ -1.22
CPSF7-224ENST00000544990 PJA2O43164 708 aa7.4□□□□□ -1.22
CPSF7-224ENST00000544990 HTRA2O43464 458 aaPredicted RBP7.4□□□□□ -1.22
CPSF7-224ENST00000544990 TNFSF14O43557 240 aa7.4□□□□□ -1.22
CPSF7-224ENST00000544990 CBFA2T3O75081 653 aa7.4□□□□□ -1.22
CPSF7-224ENST00000544990 CPP00450 1065 aa7.4□□□□□ -1.22
CPSF7-224ENST00000544990 ELFN1P0C7U0 828 aa7.4□□□□□ -1.22
CPSF7-224ENST00000544990 CYP2A6P11509 494 aaPredicted RBP7.4□□□□□ -1.22
CPSF7-224ENST00000544990 C6P13671 934 aa7.4□□□□□ -1.22
CPSF7-224ENST00000544990 CCNB1P14635 433 aa7.4□□□□□ -1.22
CPSF7-224ENST00000544990 ITIH2P19823 946 aa7.4□□□□□ -1.22
CPSF7-224ENST00000544990 EPHA8P29322 1005 aaPredicted RBP7.4□□□□□ -1.22
CPSF7-224ENST00000544990 PMLP29590 882 aa7.4□□□□□ -1.22
CPSF7-224ENST00000544990 MMP12P39900 470 aa7.4□□□□□ -1.22
CPSF7-224ENST00000544990 CETN2P41208 172 aa7.4□□□□□ -1.22
CPSF7-224ENST00000544990 NR2C2P49116 596 aa7.4□□□□□ -1.22
CPSF7-224ENST00000544990 LIG3P49916 1009 aa7.4□□□□□ -1.22
CPSF7-224ENST00000544990 VAV2P52735 878 aa7.4□□□□□ -1.22
CPSF7-224ENST00000544990 THOP1P52888 689 aa7.4□□□□□ -1.22
CPSF7-224ENST00000544990 GSDMDP57764 484 aa7.4□□□□□ -1.22
CPSF7-224ENST00000544990 MAXP61244 160 aa7.4□□□□□ -1.22
CPSF7-224ENST00000544990 HNRNPKP61978 463 aaKnown RBP eCLIP7.4□□□□□ -1.222e-11■■□□□ 14.3
CPSF7-224ENST00000544990 YPEL5P62699 121 aa7.4□□□□□ -1.22
CPSF7-224ENST00000544990 GBE1Q04446 702 aa7.4□□□□□ -1.22
CPSF7-224ENST00000544990 PPIDQ08752 370 aaKnown RBP7.4□□□□□ -1.22
CPSF7-224ENST00000544990 AP1B1Q10567 949 aa7.4□□□□□ -1.22
CPSF7-224ENST00000544990 SLC10A2Q12908 348 aaPredicted RBP7.4□□□□□ -1.22
CPSF7-224ENST00000544990 BNIP3Q12983 259 aa7.4□□□□□ -1.22
CPSF7-224ENST00000544990 PDE1CQ14123 709 aaPredicted RBP7.4□□□□□ -1.22
CPSF7-224ENST00000544990 LRRC14Q15048 493 aa7.4□□□□□ -1.22
CPSF7-224ENST00000544990 PDK1Q15118 436 aa7.4□□□□□ -1.22
CPSF7-224ENST00000544990 SPRED3Q2MJR0 410 aa7.4□□□□□ -1.22
CPSF7-224ENST00000544990 TFDP3Q5H9I0 405 aa7.4□□□□□ -1.22
CPSF7-224ENST00000544990 RPS26P11Q5JNZ5 115 aaPredicted RBP7.4□□□□□ -1.22
CPSF7-224ENST00000544990 PERM1Q5SV97 790 aa7.4□□□□□ -1.22
CPSF7-224ENST00000544990 ARMC12Q5T9G4 340 aa7.4□□□□□ -1.22
CPSF7-224ENST00000544990 MFSD7Q6UXD7 560 aa7.4□□□□□ -1.22
CPSF7-224ENST00000544990 RAD9BQ6WBX8 426 aa7.4□□□□□ -1.22
CPSF7-224ENST00000544990 DPPA4Q7L190 304 aa7.4□□□□□ -1.22
CPSF7-224ENST00000544990 GATAD2AQ86YP4 633 aa7.4□□□□□ -1.22
CPSF7-224ENST00000544990 CCDC50Q8IVM0 306 aa7.4□□□□□ -1.22
CPSF7-224ENST00000544990 RCOR2Q8IZ40 523 aa7.4□□□□□ -1.22
CPSF7-224ENST00000544990 PGBD5Q8N414 524 aa7.4□□□□□ -1.22
CPSF7-224ENST00000544990 PLD5Q8N7P1 536 aa7.4□□□□□ -1.22
CPSF7-224ENST00000544990 KIAA1524Q8TCG1 905 aa7.4□□□□□ -1.22
CPSF7-224ENST00000544990 SAP25Q8TEE9 199 aa7.4□□□□□ -1.22
CPSF7-224ENST00000544990 CENPTQ96BT3 561 aa7.4□□□□□ -1.22
CPSF7-224ENST00000544990 RBM41Q96IZ5 413 aaKnown RBP7.4□□□□□ -1.22
CPSF7-224ENST00000544990 SEMA3CQ99985 751 aa7.4□□□□□ -1.22
CPSF7-224ENST00000544990 TGIF2Q9GZN2 237 aa7.4□□□□□ -1.22
CPSF7-224ENST00000544990 NOD2Q9HC29 1040 aa7.4□□□□□ -1.22
CPSF7-224ENST00000544990 DTLQ9NZJ0 730 aa7.4□□□□□ -1.22
CPSF7-224ENST00000544990 FTSJ1Q9UET6 329 aa7.4□□□□□ -1.22
CPSF7-224ENST00000544990 KLF15Q9UIH9 416 aa7.4□□□□□ -1.22
CPSF7-224ENST00000544990 BTBD3Q9Y2F9 522 aa7.4□□□□□ -1.22
CPSF7-224ENST00000544990 TTLL3Q9Y4R7 772 aa7.4□□□□□ -1.22
CPSF7-224ENST00000544990 TPRP12270 2363 aaKnown RBP7.39□□□□□ -1.23
CPSF7-224ENST00000544990 CACNA1BQ00975 2339 aa7.39□□□□□ -1.23
CPSF7-224ENST00000544990 COL5A1P20908 1838 aaPredicted RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms