RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 LDLRP01130 860 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 ATP6V1B2P21281 511 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 TACR2P21452 398 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 HOXA11P31270 313 aaPredicted RBP5.79□□□□□ -1.48
VPS50-220ENST00000544910 MC4RP32245 332 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 MAGEA6P43360 314 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 TUBA4AP68366 448 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 THEMIS2Q5TEJ8 643 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 GDF6Q6KF10 455 aaPredicted RBP5.79□□□□□ -1.48
VPS50-220ENST00000544910 GPRIN3Q6ZVF9 776 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 PROSER1Q86XN7 944 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 SCAMP5Q8TAC9 235 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 METTL6Q8TCB7 284 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 UCMAQ8WVF2 138 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 TWIST2Q8WVJ9 160 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 SEPHS2Q99611 448 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 UGT2B28Q9BY64 529 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 OXCT2Q9BYC2 517 aaPredicted RBP5.79□□□□□ -1.48
VPS50-220ENST00000544910 FAM126AQ9BYI3 521 aaPredicted RBP5.79□□□□□ -1.48
VPS50-220ENST00000544910 SMOC2Q9H3U7 446 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 RUBCNLQ9H714 662 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 TRIM45Q9H8W5 580 aaPredicted RBP5.79□□□□□ -1.48
VPS50-220ENST00000544910 FANCEQ9HB96 536 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 PRDM5Q9NQX1 630 aaPredicted RBP5.79□□□□□ -1.48
VPS50-220ENST00000544910 CACNG4Q9UBN1 327 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 STK39Q9UEW8 545 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 ZMYM5Q9UJ78 669 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 PSAT1Q9Y617 370 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 LTBP1Q14766 1721 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.79□□□□□ -1.48
VPS50-220ENST00000544910 TBX10O75333 385 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 TSPAN9O75954 239 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 BEST1O76090 585 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 KRT6AP02538 564 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 KRT6BP04259 564 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 KRT6CP48668 564 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 NR1H2P55055 460 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 RAB15P59190 212 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 SOX4Q06945 474 aaPredicted RBP5.79□□□□□ -1.48
VPS50-220ENST00000544910 KCNA10Q16322 511 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 ARHGAP15Q53QZ3 475 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 CNSTQ6PJW8 725 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 ARHGAP36Q6ZRI8 547 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 HDDC2Q7Z4H3 204 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 ZC3HC1Q86WB0 502 aaKnown RBP5.79□□□□□ -1.48
VPS50-220ENST00000544910 P3H2Q8IVL5 708 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 STYXQ8WUJ0 223 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 MRPS31Q92665 395 aaKnown RBP5.79□□□□□ -1.48
VPS50-220ENST00000544910 SLC7A6OSQ96CW6 309 aaPredicted RBP5.79□□□□□ -1.48
VPS50-220ENST00000544910 BTBD9Q96Q07 612 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 TCF12Q99081 682 aa5.79□□□□□ -1.48
VPS50-220ENST00000544910 FAM72CH0Y354 149 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 NRP2O60462 931 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 ALDOAP04075 364 aaKnown RBP5.78□□□□□ -1.48
VPS50-220ENST00000544910 HGFP14210 728 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 DDX5P17844 614 aaKnown RBP5.78□□□□□ -1.48
VPS50-220ENST00000544910 PPP3CCP48454 512 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 BCL2L1Q07817 233 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 CSTF3Q12996 717 aaKnown RBP5.78□□□□□ -1.48
VPS50-220ENST00000544910 ADGRE1Q14246 886 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 DGUOKQ16854 277 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 FAM72AQ5TYM5 149 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 FAM72DQ6L9T8 149 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 FAM72BQ86X60 149 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 CAMK1DQ8IU85 385 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 GLMNQ92990 594 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 TMEM169Q96HH4 297 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 UNC93B1Q9H1C4 597 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 PNPLA3Q9NST1 481 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 PRKAG2Q9UGJ0 569 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 PCDHGB4Q9UN71 923 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 PDZK1P1A8MUH7 402 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 TLR5O60602 858 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 TBL1XO60907 577 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 FKBP9O95302 570 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 ALOX5P09917 674 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 PRKAR2AP13861 404 aaKnown RBP5.78□□□□□ -1.48
VPS50-220ENST00000544910 CYP2A7P20853 494 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 LPOP22079 712 aaPredicted RBP5.78□□□□□ -1.48
VPS50-220ENST00000544910 PIK3CGP48736 1102 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 TNK2Q07912 1038 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 CDC16Q13042 620 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 CMPK2Q5EBM0 449 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 PPM1LQ5SGD2 360 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 CLEC6AQ6EIG7 209 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 ANO7Q6IWH7 933 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 RETSATQ6NUM9 610 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 RBM44Q6ZP01 1051 aaKnown RBP5.78□□□□□ -1.48
VPS50-220ENST00000544910 FKBP9P1Q75LS8 142 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 HS6ST3Q8IZP7 471 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 ZNF276Q8N554 614 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 TSPAN14Q8NG11 270 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 ITFG1Q8TB96 612 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 EZH1Q92800 747 aaPredicted RBP5.78□□□□□ -1.48
VPS50-220ENST00000544910 ITFG2Q969R8 447 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 ROPN1LQ96C74 230 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 LINGO1Q96FE5 620 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 SUSD3Q96L08 255 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 APOL4Q9BPW4 351 aa5.78□□□□□ -1.48
VPS50-220ENST00000544910 BBS2Q9BXC9 721 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms