RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 ACTRT1Q8TDG2 376 aa19.1■□□□□ 0.65
DDX55-211ENST00000544429 SAP25Q8TEE9 199 aa19.1■□□□□ 0.65
DDX55-211ENST00000544429 SRPK1Q96SB4 655 aaKnown RBP19.1■□□□□ 0.65
DDX55-211ENST00000544429 APOOQ9BUR5 198 aa19.1■□□□□ 0.65
DDX55-211ENST00000544429 ABCG8Q9H221 673 aa19.1■□□□□ 0.65
DDX55-211ENST00000544429 ARNT2Q9HBZ2 717 aa19.1■□□□□ 0.65
DDX55-211ENST00000544429 HOMER3Q9NSC5 361 aa19.1■□□□□ 0.65
DDX55-211ENST00000544429 NFKBIL1Q9UBC1 381 aaPredicted RBP19.1■□□□□ 0.65
DDX55-211ENST00000544429 ZNF148Q9UQR1 794 aa19.1■□□□□ 0.65
DDX55-211ENST00000544429 ZNF711Q9Y462 761 aa19.1■□□□□ 0.65
DDX55-211ENST00000544429 ZNF106Q9H2Y7 1883 aaKnown RBP19.09■□□□□ 0.65
DDX55-211ENST00000544429 CACNA1AO00555 2505 aa19.09■□□□□ 0.65
DDX55-211ENST00000544429 RGSL1A5PLK6 1076 aa19.09■□□□□ 0.65
DDX55-211ENST00000544429 CBFA2T3O75081 653 aa19.09■□□□□ 0.65
DDX55-211ENST00000544429 CSF2P04141 144 aa19.09■□□□□ 0.65
DDX55-211ENST00000544429 PCCBP05166 539 aa19.09■□□□□ 0.65
DDX55-211ENST00000544429 FGF1P05230 155 aa19.09■□□□□ 0.65
DDX55-211ENST00000544429 PIRTP0C851 137 aa19.09■□□□□ 0.65
DDX55-211ENST00000544429 NME1P15531 152 aaKnown RBP19.09■□□□□ 0.65
DDX55-211ENST00000544429 CSRP1P21291 193 aaKnown RBP19.09■□□□□ 0.65
DDX55-211ENST00000544429 EPHA8P29322 1005 aaPredicted RBP19.09■□□□□ 0.65
DDX55-211ENST00000544429 ID4P47928 161 aa19.09■□□□□ 0.65
DDX55-211ENST00000544429 SPINT3P49223 89 aa19.09■□□□□ 0.65
DDX55-211ENST00000544429 ARRB1P49407 418 aaPredicted RBP19.09■□□□□ 0.65
DDX55-211ENST00000544429 EIF2B5Q13144 721 aaKnown RBP19.09■□□□□ 0.65
DDX55-211ENST00000544429 SNX1Q13596 522 aa19.09■□□□□ 0.65
DDX55-211ENST00000544429 PDE1CQ14123 709 aaPredicted RBP19.09■□□□□ 0.65
DDX55-211ENST00000544429 PRPSAP1Q14558 356 aa19.09■□□□□ 0.65
DDX55-211ENST00000544429 CYP1B1Q16678 543 aa19.09■□□□□ 0.65
DDX55-211ENST00000544429 UAP1L1Q3KQV9 507 aa19.09■□□□□ 0.65
DDX55-211ENST00000544429 DENND5AQ6IQ26 1287 aa19.09■□□□□ 0.65
DDX55-211ENST00000544429 MACC1Q6ZN28 852 aa19.09■□□□□ 0.65
DDX55-211ENST00000544429 ARHGEF18Q6ZSZ5 1173 aa19.09■□□□□ 0.65
DDX55-211ENST00000544429 PARGQ86W56 976 aa19.09■□□□□ 0.65
DDX55-211ENST00000544429 GLIS1Q8NBF1 620 aa19.09■□□□□ 0.65
DDX55-211ENST00000544429 FUBP1Q96AE4 644 aaKnown RBP19.09■□□□□ 0.65
DDX55-211ENST00000544429 TEX101Q9BY14 249 aa19.09■□□□□ 0.65
DDX55-211ENST00000544429 TRABDQ9H4I3 376 aa19.09■□□□□ 0.65
DDX55-211ENST00000544429 ZFYVE1Q9HBF4 777 aa19.09■□□□□ 0.65
DDX55-211ENST00000544429 KLF15Q9UIH9 416 aa19.09■□□□□ 0.65
DDX55-211ENST00000544429 MYLKQ15746 1914 aa19.08■□□□□ 0.65
DDX55-211ENST00000544429 AGTP01019 485 aa19.08■□□□□ 0.64
DDX55-211ENST00000544429 TSHRP16473 764 aa19.08■□□□□ 0.64
DDX55-211ENST00000544429 KIAA1024LP59773 190 aa19.08■□□□□ 0.64
DDX55-211ENST00000544429 GNG11P61952 73 aa19.08■□□□□ 0.64
DDX55-211ENST00000544429 PTK2BQ14289 1009 aa19.08■□□□□ 0.64
DDX55-211ENST00000544429 NFATC4Q14934 902 aa19.08■□□□□ 0.64
DDX55-211ENST00000544429 HENMT1Q5T8I9 393 aaKnown RBP19.08■□□□□ 0.64
DDX55-211ENST00000544429 DENND2CQ68D51 928 aa19.08■□□□□ 0.64
DDX55-211ENST00000544429 CCDC70Q6NSX1 233 aa19.08■□□□□ 0.64
DDX55-211ENST00000544429 TTC30BQ8N4P2 665 aa19.08■□□□□ 0.64
DDX55-211ENST00000544429 BAHD1Q8TBE0 780 aaPredicted RBP19.08■□□□□ 0.64
DDX55-211ENST00000544429 SCAMP4Q969E2 229 aa19.08■□□□□ 0.64
DDX55-211ENST00000544429 FSD1LQ9BXM9 530 aa19.08■□□□□ 0.64
DDX55-211ENST00000544429 CAAP1Q9H8G2 361 aa19.08■□□□□ 0.64
DDX55-211ENST00000544429 OR1A2Q9Y585 309 aa19.08■□□□□ 0.64
DDX55-211ENST00000544429 SPEGQ15772 3267 aa19.07■□□□□ 0.64
DDX55-211ENST00000544429 GOLGA8CPA6NN73 597 aa19.07■□□□□ 0.64
DDX55-211ENST00000544429 PGRMC1O00264 195 aaKnown RBP19.07■□□□□ 0.64
DDX55-211ENST00000544429 AURKAO14965 403 aa19.07■□□□□ 0.64
DDX55-211ENST00000544429 FLRT2O43155 660 aa19.07■□□□□ 0.64
DDX55-211ENST00000544429 TCP1P17987 556 aaKnown RBP19.07■□□□□ 0.64
DDX55-211ENST00000544429 HMGCLP35914 325 aa19.07■□□□□ 0.64
DDX55-211ENST00000544429 DCDC1P59894 354 aa19.07■□□□□ 0.64
DDX55-211ENST00000544429 OLIG2Q13516 323 aa19.07■□□□□ 0.64
DDX55-211ENST00000544429 CCHCR1Q8TD31 782 aa19.07■□□□□ 0.64
DDX55-211ENST00000544429 TBATAQ96M53 351 aa19.07■□□□□ 0.64
DDX55-211ENST00000544429 FICDQ9BVA6 458 aa19.07■□□□□ 0.64
DDX55-211ENST00000544429 LGR4Q9BXB1 951 aa19.07■□□□□ 0.64
DDX55-211ENST00000544429 HACD3Q9P035 362 aa19.07■□□□□ 0.64
DDX55-211ENST00000544429 SHOC2Q9UQ13 582 aa19.07■□□□□ 0.64
DDX55-211ENST00000544429 BPTFQ12830 3046 aa19.06■□□□□ 0.64
DDX55-211ENST00000544429 ZNF185O15231 689 aa19.06■□□□□ 0.64
DDX55-211ENST00000544429 AP2A1O95782 977 aa19.06■□□□□ 0.64
DDX55-211ENST00000544429 GIMD1P0DJR0 217 aa19.06■□□□□ 0.64
DDX55-211ENST00000544429 ETS1P14921 441 aa19.06■□□□□ 0.64
DDX55-211ENST00000544429 THOP1P52888 689 aa19.06■□□□□ 0.64
DDX55-211ENST00000544429 IL9RQ01113 521 aa19.06■□□□□ 0.64
DDX55-211ENST00000544429 BNIP3Q12983 259 aa19.06■□□□□ 0.64
DDX55-211ENST00000544429 SEMA5AQ13591 1074 aa19.06■□□□□ 0.64
DDX55-211ENST00000544429 TTC27Q6P3X3 843 aa19.06■□□□□ 0.64
DDX55-211ENST00000544429 ADAMTSL4Q6UY14 1074 aa19.06■□□□□ 0.64
DDX55-211ENST00000544429 NAXDQ8IW45 347 aa19.06■□□□□ 0.64
DDX55-211ENST00000544429 SLC25A45Q8N413 288 aa19.06■□□□□ 0.64
DDX55-211ENST00000544429 SLC25A41Q8N5S1 370 aa19.06■□□□□ 0.64
DDX55-211ENST00000544429 AP2M1Q96CW1 435 aa19.06■□□□□ 0.64
DDX55-211ENST00000544429 NAP1L3Q99457 506 aaPredicted RBP19.06■□□□□ 0.64
DDX55-211ENST00000544429 AGAP2Q99490 1192 aa19.06■□□□□ 0.64
DDX55-211ENST00000544429 CDH19Q9H159 772 aa19.06■□□□□ 0.64
DDX55-211ENST00000544429 WDR26Q9H7D7 661 aa19.06■□□□□ 0.64
DDX55-211ENST00000544429 SMARCAL1Q9NZC9 954 aa19.06■□□□□ 0.64
DDX55-211ENST00000544429 PKD2L2Q9NZM6 624 aa19.06■□□□□ 0.64
DDX55-211ENST00000544429 CD84Q9UIB8 345 aa19.06■□□□□ 0.64
DDX55-211ENST00000544429 PCOLCE2Q9UKZ9 415 aa19.06■□□□□ 0.64
DDX55-211ENST00000544429 DCDC2BA2VCK2 349 aa19.05■□□□□ 0.64
DDX55-211ENST00000544429 TMEM202A6NGA9 273 aa19.05■□□□□ 0.64
DDX55-211ENST00000544429 SH3BP5O60239 455 aa19.05■□□□□ 0.64
DDX55-211ENST00000544429 PIAS2O75928 621 aa19.05■□□□□ 0.64
DDX55-211ENST00000544429 IFNB1P01574 187 aa19.05■□□□□ 0.64
DDX55-211ENST00000544429 PYGLP06737 847 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms