RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 HEBP1Q9NRV9 189 aa30.41■■■□□ 2.46
CCM2-219ENST00000544363 B4GALT6Q9UBX8 382 aa30.41■■■□□ 2.46
CCM2-219ENST00000544363 SARDHQ9UL12 918 aa30.41■■■□□ 2.46
CCM2-219ENST00000544363 PIAS3Q9Y6X2 628 aa30.41■■■□□ 2.46
CCM2-219ENST00000544363 TPP1O14773 563 aa30.4■■■□□ 2.46
CCM2-219ENST00000544363 ASGR2P07307 311 aa30.4■■■□□ 2.46
CCM2-219ENST00000544363 NFKBIAP25963 317 aa30.4■■■□□ 2.46
CCM2-219ENST00000544363 MC4RP32245 332 aa30.4■■■□□ 2.46
CCM2-219ENST00000544363 PEX6Q13608 980 aa30.4■■■□□ 2.46
CCM2-219ENST00000544363 LRRC66Q68CR7 880 aa30.4■■■□□ 2.46
CCM2-219ENST00000544363 SDCCAG8Q86SQ7 713 aaPredicted RBP30.4■■■□□ 2.46
CCM2-219ENST00000544363 CAPS2Q9BXY5 557 aa30.4■■■□□ 2.46
CCM2-219ENST00000544363 PRSS16Q9NQE7 514 aa30.4■■■□□ 2.46
CCM2-219ENST00000544363 KPNA3O00505 521 aaPredicted RBP30.4■■■□□ 2.46
CCM2-219ENST00000544363 S1PR4O95977 384 aa30.4■■■□□ 2.46
CCM2-219ENST00000544363 CYP2A6P11509 494 aaPredicted RBP30.4■■■□□ 2.46
CCM2-219ENST00000544363 FOXN2P32314 431 aa30.4■■■□□ 2.46
CCM2-219ENST00000544363 KIR2DL1P43626 348 aaPredicted RBP30.4■■■□□ 2.46
CCM2-219ENST00000544363 XIAPP98170 497 aa30.4■■■□□ 2.46
CCM2-219ENST00000544363 GUCY1A3Q02108 690 aa30.4■■■□□ 2.46
CCM2-219ENST00000544363 SEMG2Q02383 582 aa30.4■■■□□ 2.46
CCM2-219ENST00000544363 LRRC73Q5JTD7 316 aa30.4■■■□□ 2.46
CCM2-219ENST00000544363 LDB1Q86U70 411 aaPredicted RBP30.4■■■□□ 2.46
CCM2-219ENST00000544363 CHPFQ8IZ52 775 aa30.4■■■□□ 2.46
CCM2-219ENST00000544363 ANKRD42Q8N9B4 389 aa30.4■■■□□ 2.46
CCM2-219ENST00000544363 PIP4K2CQ8TBX8 421 aa30.4■■■□□ 2.46
CCM2-219ENST00000544363 SCG3Q8WXD2 468 aaKnown RBP30.4■■■□□ 2.46
CCM2-219ENST00000544363 NKIRAS1Q9NYS0 192 aa30.4■■■□□ 2.46
CCM2-219ENST00000544363 LHCGRP22888 699 aa30.39■■■□□ 2.46
CCM2-219ENST00000544363 POLD2P49005 469 aa30.39■■■□□ 2.46
CCM2-219ENST00000544363 SERPINB8P50452 374 aa30.39■■■□□ 2.46
CCM2-219ENST00000544363 SEMA3AQ14563 771 aa30.39■■■□□ 2.46
CCM2-219ENST00000544363 POM121L1PQ3SYA9 428 aa30.39■■■□□ 2.46
CCM2-219ENST00000544363 ZNF789Q5FWF6 425 aa30.39■■■□□ 2.46
CCM2-219ENST00000544363 PTCRAQ6ISU1 281 aaPredicted RBP30.39■■■□□ 2.46
CCM2-219ENST00000544363 CNSTQ6PJW8 725 aa30.39■■■□□ 2.46
CCM2-219ENST00000544363 DSG4Q86SJ6 1040 aa30.39■■■□□ 2.46
CCM2-219ENST00000544363 TTC7BQ86TV6 843 aa30.39■■■□□ 2.46
CCM2-219ENST00000544363 APOPT1Q96IL0 206 aa30.39■■■□□ 2.46
CCM2-219ENST00000544363 INTS9Q9NV88 658 aaKnown RBP30.39■■■□□ 2.46
CCM2-219ENST00000544363 A6NNZ2 444 aa30.38■■■□□ 2.45
CCM2-219ENST00000544363 XPAP23025 273 aaPredicted RBP30.38■■■□□ 2.45
CCM2-219ENST00000544363 TYK2P29597 1187 aa30.38■■■□□ 2.45
CCM2-219ENST00000544363 MAGEA12P43365 314 aa30.38■■■□□ 2.45
CCM2-219ENST00000544363 PTSQ03393 145 aa30.38■■■□□ 2.45
CCM2-219ENST00000544363 TYSND1Q2T9J0 566 aa30.38■■■□□ 2.45
CCM2-219ENST00000544363 TUBB8Q3ZCM7 444 aa30.38■■■□□ 2.45
CCM2-219ENST00000544363 PARS2Q7L3T8 475 aaKnown RBP30.38■■■□□ 2.45
CCM2-219ENST00000544363 CBARPQ8N350 705 aaPredicted RBP30.38■■■□□ 2.45
CCM2-219ENST00000544363 PNPLA1Q8N8W4 532 aa30.38■■■□□ 2.45
CCM2-219ENST00000544363 PCDH12Q9NPG4 1184 aa30.38■■■□□ 2.45
CCM2-219ENST00000544363 SNX15Q9NRS6 342 aa30.38■■■□□ 2.45
CCM2-219ENST00000544363 ITGB7P26010 798 aa30.37■■■□□ 2.45
CCM2-219ENST00000544363 VIPR1P32241 457 aa30.37■■■□□ 2.45
CCM2-219ENST00000544363 RPA3P35244 121 aaPredicted RBP30.37■■■□□ 2.45
CCM2-219ENST00000544363 TIE1P35590 1138 aa30.37■■■□□ 2.45
CCM2-219ENST00000544363 SEC13P55735 322 aa30.37■■■□□ 2.45
CCM2-219ENST00000544363 ILF2Q12905 390 aaKnown RBP30.37■■■□□ 2.45
CCM2-219ENST00000544363 PON2Q15165 354 aa30.37■■■□□ 2.45
CCM2-219ENST00000544363 TMEM196Q5HYL7 178 aa30.37■■■□□ 2.45
CCM2-219ENST00000544363 TTC19Q6DKK2 380 aaPredicted RBP30.37■■■□□ 2.45
CCM2-219ENST00000544363 ACVR1CQ8NER5 493 aa30.37■■■□□ 2.45
CCM2-219ENST00000544363 DENND1AQ8TEH3 1009 aa30.37■■■□□ 2.45
CCM2-219ENST00000544363 PCMTD2Q9NV79 361 aa30.37■■■□□ 2.45
CCM2-219ENST00000544363 MKS1Q9NXB0 559 aa30.37■■■□□ 2.45
CCM2-219ENST00000544363 SLC39A10Q9ULF5 831 aa30.37■■■□□ 2.45
CCM2-219ENST00000544363 FNDC3AQ9Y2H6 1198 aaKnown RBP30.37■■■□□ 2.45
CCM2-219ENST00000544363 UNC80Q8N2C7 3258 aa30.37■■■□□ 2.45
CCM2-219ENST00000544363 FAM95CA0A1B0GW59 222 aa30.36■■■□□ 2.45
CCM2-219ENST00000544363 COPEO14579 308 aa30.36■■■□□ 2.45
CCM2-219ENST00000544363 PRSS56P0CW18 603 aa30.36■■■□□ 2.45
CCM2-219ENST00000544363 ZNF30P17039 623 aa30.36■■■□□ 2.45
CCM2-219ENST00000544363 BPIP17213 487 aa30.36■■■□□ 2.45
CCM2-219ENST00000544363 PMLP29590 882 aa30.36■■■□□ 2.45
CCM2-219ENST00000544363 STC1P52823 247 aa30.36■■■□□ 2.45
CCM2-219ENST00000544363 PFKPQ01813 784 aa30.36■■■□□ 2.45
CCM2-219ENST00000544363 ZRANB3Q5FWF4 1079 aa30.36■■■□□ 2.45
CCM2-219ENST00000544363 MGARPQ8TDB4 240 aa30.36■■■□□ 2.45
CCM2-219ENST00000544363 PBXIP1Q96AQ6 731 aa30.36■■■□□ 2.45
CCM2-219ENST00000544363 CENPTQ96BT3 561 aa30.36■■■□□ 2.45
CCM2-219ENST00000544363 TCF12Q99081 682 aa30.36■■■□□ 2.45
CCM2-219ENST00000544363 SCN8AQ9UQD0 1980 aa30.36■■■□□ 2.45
CCM2-219ENST00000544363 BPTFQ12830 3046 aa30.36■■■□□ 2.45
CCM2-219ENST00000544363 ZWINTO95229 277 aa30.36■■■□□ 2.45
CCM2-219ENST00000544363 IL1BP01584 269 aa30.36■■■□□ 2.45
CCM2-219ENST00000544363 CHRM1P11229 460 aaPredicted RBP30.36■■■□□ 2.45
CCM2-219ENST00000544363 WASP42768 502 aa30.36■■■□□ 2.45
CCM2-219ENST00000544363 CLCN5P51795 746 aa30.36■■■□□ 2.45
CCM2-219ENST00000544363 NEK3P51956 506 aa30.36■■■□□ 2.45
CCM2-219ENST00000544363 PTPN5P54829 565 aa30.36■■■□□ 2.45
CCM2-219ENST00000544363 ARHGEF7Q14155 803 aa30.36■■■□□ 2.45
CCM2-219ENST00000544363 CMC1Q7Z7K0 106 aa30.36■■■□□ 2.45
CCM2-219ENST00000544363 ARRDC3Q96B67 414 aa30.36■■■□□ 2.45
CCM2-219ENST00000544363 PPP1R16AQ96I34 528 aa30.36■■■□□ 2.45
CCM2-219ENST00000544363 SLC13A1Q9BZW2 595 aa30.36■■■□□ 2.45
CCM2-219ENST00000544363 CAB39LQ9H9S4 337 aa30.36■■■□□ 2.45
CCM2-219ENST00000544363 INTS10Q9NVR2 710 aaKnown RBP30.36■■■□□ 2.45
CCM2-219ENST00000544363 APPL1Q9UKG1 709 aa30.36■■■□□ 2.45
CCM2-219ENST00000544363 SLC30A1Q9Y6M5 507 aa30.36■■■□□ 2.45
CCM2-219ENST00000544363 NARSO43776 548 aaKnown RBP30.35■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms