RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 ATG16L1Q676U5 607 aa13.67□□□□□ -0.22
HCFC2-202ENST00000544223 ZNF783Q6ZMS7 281 aa13.67□□□□□ -0.22
HCFC2-202ENST00000544223 EP400NLQ6ZTU2 488 aa13.67□□□□□ -0.22
HCFC2-202ENST00000544223 TTC30BQ8N4P2 665 aa13.67□□□□□ -0.22
HCFC2-202ENST00000544223 STYXQ8WUJ0 223 aa13.67□□□□□ -0.22
HCFC2-202ENST00000544223 GRAMD1AQ96CP6 724 aa13.67□□□□□ -0.22
HCFC2-202ENST00000544223 BOCQ9BWV1 1114 aa13.67□□□□□ -0.22
HCFC2-202ENST00000544223 KDM4CQ9H3R0 1056 aa13.67□□□□□ -0.22
HCFC2-202ENST00000544223 SARS2Q9NP81 518 aaKnown RBP13.67□□□□□ -0.22
HCFC2-202ENST00000544223 NSMCE4AQ9NXX6 385 aa13.67□□□□□ -0.22
HCFC2-202ENST00000544223 FIS1Q9Y3D6 152 aa13.67□□□□□ -0.22
HCFC2-202ENST00000544223 ZNF711Q9Y462 761 aa13.67□□□□□ -0.22
HCFC2-202ENST00000544223 USH1CQ9Y6N9 552 aa13.67□□□□□ -0.22
HCFC2-202ENST00000544223 NPIPB15A6NHN6 443 aaPredicted RBP13.66□□□□□ -0.22
HCFC2-202ENST00000544223 LRRC14BA6NHZ5 514 aa13.66□□□□□ -0.22
HCFC2-202ENST00000544223 H3BMM5 538 aa13.66□□□□□ -0.22
HCFC2-202ENST00000544223 ZBTB14O43829 449 aa13.66□□□□□ -0.22
HCFC2-202ENST00000544223 NIPSNAP2O75323 286 aa13.66□□□□□ -0.22
HCFC2-202ENST00000544223 PABPC1P11940 636 aaKnown RBP13.66□□□□□ -0.22
HCFC2-202ENST00000544223 HNRNPLP14866 589 aaKnown RBP eCLIP13.66□□□□□ -0.22
HCFC2-202ENST00000544223 LPOP22079 712 aaPredicted RBP13.66□□□□□ -0.22
HCFC2-202ENST00000544223 GRIA4P48058 902 aa13.66□□□□□ -0.22
HCFC2-202ENST00000544223 STC1P52823 247 aa13.66□□□□□ -0.22
HCFC2-202ENST00000544223 METAP1P53582 386 aa13.66□□□□□ -0.22
HCFC2-202ENST00000544223 ACVR1Q04771 509 aa13.66□□□□□ -0.22
HCFC2-202ENST00000544223 NSUN2Q08J23 767 aaKnown RBP eCLIP13.66□□□□□ -0.22
HCFC2-202ENST00000544223 RNF43Q68DV7 783 aa13.66□□□□□ -0.22
HCFC2-202ENST00000544223 TBC1D1Q86TI0 1168 aaPredicted RBP13.66□□□□□ -0.22
HCFC2-202ENST00000544223 CLDN19Q8N6F1 224 aa13.66□□□□□ -0.22
HCFC2-202ENST00000544223 TXNDC5Q8NBS9 432 aaKnown RBP13.66□□□□□ -0.22
HCFC2-202ENST00000544223 OSBPL1AQ9BXW6 950 aa13.66□□□□□ -0.22
HCFC2-202ENST00000544223 NMUR2Q9GZQ4 415 aa13.66□□□□□ -0.22
HCFC2-202ENST00000544223 CD84Q9UIB8 345 aa13.66□□□□□ -0.22
HCFC2-202ENST00000544223 MED16Q9Y2X0 877 aa13.66□□□□□ -0.22
HCFC2-202ENST00000544223 BIRC5O15392 142 aa13.66□□□□□ -0.22
HCFC2-202ENST00000544223 KLHL2O95198 593 aa13.66□□□□□ -0.22
HCFC2-202ENST00000544223 PENKP01210 267 aaPredicted RBP13.66□□□□□ -0.22
HCFC2-202ENST00000544223 JUNP05412 331 aaKnown RBP13.66□□□□□ -0.22
HCFC2-202ENST00000544223 MPSTP25325 297 aa13.66□□□□□ -0.22
HCFC2-202ENST00000544223 CCNHP51946 323 aaPredicted RBP13.66□□□□□ -0.22
HCFC2-202ENST00000544223 ERVK-21P61565 698 aa13.66□□□□□ -0.22
HCFC2-202ENST00000544223 UBE3AQ05086 875 aa13.66□□□□□ -0.22
HCFC2-202ENST00000544223 ACTN3Q08043 901 aaPredicted RBP13.66□□□□□ -0.22
HCFC2-202ENST00000544223 CCDC153Q494R4 210 aa13.66□□□□□ -0.22
HCFC2-202ENST00000544223 YTHDF3Q7Z739 585 aaKnown RBP13.66□□□□□ -0.22
HCFC2-202ENST00000544223 SPATS2Q86XZ4 545 aaKnown RBP13.66□□□□□ -0.22
HCFC2-202ENST00000544223 CRLF3Q8IUI8 442 aa13.66□□□□□ -0.22
HCFC2-202ENST00000544223 OR2AP1Q8NGE2 309 aa13.66□□□□□ -0.22
HCFC2-202ENST00000544223 CALML6Q8TD86 181 aa13.66□□□□□ -0.22
HCFC2-202ENST00000544223 ACDQ96AP0 544 aa13.66□□□□□ -0.22
HCFC2-202ENST00000544223 PTERQ96BW5 349 aa13.66□□□□□ -0.22
HCFC2-202ENST00000544223 HTATIP2Q9BUP3 242 aa13.66□□□□□ -0.22
HCFC2-202ENST00000544223 THAP1Q9NVV9 213 aa13.66□□□□□ -0.22
HCFC2-202ENST00000544223 SLC12A4Q9UP95 1085 aa13.66□□□□□ -0.22
HCFC2-202ENST00000544223 ZNF510Q9Y2H8 683 aa13.66□□□□□ -0.22
HCFC2-202ENST00000544223 DMDP11532 3685 aa13.65□□□□□ -0.22
HCFC2-202ENST00000544223 CCDC85CA6NKD9 419 aa13.65□□□□□ -0.22
HCFC2-202ENST00000544223 KLF11O14901 512 aa13.65□□□□□ -0.22
HCFC2-202ENST00000544223 SERPINE1P05121 402 aa13.65□□□□□ -0.22
HCFC2-202ENST00000544223 CPA2P48052 419 aa13.65□□□□□ -0.22
HCFC2-202ENST00000544223 ALDH18A1P54886 795 aaKnown RBP13.65□□□□□ -0.22
HCFC2-202ENST00000544223 ECT2LQ008S8 904 aa13.65□□□□□ -0.22
HCFC2-202ENST00000544223 POU4F1Q01851 419 aa13.65□□□□□ -0.22
HCFC2-202ENST00000544223 PTPRNQ16849 979 aa13.65□□□□□ -0.22
HCFC2-202ENST00000544223 INSCQ1MX18 579 aa13.65□□□□□ -0.22
HCFC2-202ENST00000544223 GALNTL6Q49A17 601 aa13.65□□□□□ -0.22
HCFC2-202ENST00000544223 SETMARQ53H47 684 aaPredicted RBP13.65□□□□□ -0.22
HCFC2-202ENST00000544223 C22orf39Q6P5X5 142 aa13.65□□□□□ -0.22
HCFC2-202ENST00000544223 FGF13Q92913 245 aa13.65□□□□□ -0.22
HCFC2-202ENST00000544223 TNFRSF12AQ9NP84 129 aa13.65□□□□□ -0.22
HCFC2-202ENST00000544223 OXSMQ9NWU1 459 aa13.65□□□□□ -0.22
HCFC2-202ENST00000544223 DUS2Q9NX74 493 aaKnown RBP13.65□□□□□ -0.22
HCFC2-202ENST00000544223 RWDD3Q9Y3V2 267 aa13.65□□□□□ -0.22
HCFC2-202ENST00000544223 WDR87Q6ZQQ6 2873 aa13.65□□□□□ -0.22
HCFC2-202ENST00000544223 GOLGA8QA0A0J9YX86 632 aa13.65□□□□□ -0.22
HCFC2-202ENST00000544223 GOLGA8OA6NCC3 632 aa13.65□□□□□ -0.22
HCFC2-202ENST00000544223 TARM1B6A8C7 271 aa13.65□□□□□ -0.22
HCFC2-202ENST00000544223 WASH3PC4AMC7 463 aa13.65□□□□□ -0.22
HCFC2-202ENST00000544223 GOLGA8NF8WBI6 632 aa13.65□□□□□ -0.22
HCFC2-202ENST00000544223 CYP17A1P05093 508 aa13.65□□□□□ -0.22
HCFC2-202ENST00000544223 T-ENOLP0DO92 83 aa13.65□□□□□ -0.22
HCFC2-202ENST00000544223 ABCE1P61221 599 aaKnown RBP13.65□□□□□ -0.22
HCFC2-202ENST00000544223 NCALDP61601 193 aa13.65□□□□□ -0.22
HCFC2-202ENST00000544223 ZBTB16Q05516 673 aa13.65□□□□□ -0.22
HCFC2-202ENST00000544223 UBAP2LQ14157 1087 aaKnown RBP13.65□□□□□ -0.22
HCFC2-202ENST00000544223 DHCR24Q15392 516 aa13.65□□□□□ -0.22
HCFC2-202ENST00000544223 MPP7Q5T2T1 576 aa13.65□□□□□ -0.22
HCFC2-202ENST00000544223 MRNIPQ6NTE8 343 aa13.65□□□□□ -0.22
HCFC2-202ENST00000544223 PAQR3Q6TCH7 311 aa13.65□□□□□ -0.22
HCFC2-202ENST00000544223 NPAS3Q8IXF0 933 aa13.65□□□□□ -0.22
HCFC2-202ENST00000544223 SIDT2Q8NBJ9 832 aaKnown RBP13.65□□□□□ -0.22
HCFC2-202ENST00000544223 MAPK15Q8TD08 544 aa13.65□□□□□ -0.22
HCFC2-202ENST00000544223 NXPE3Q969Y0 559 aa13.65□□□□□ -0.22
HCFC2-202ENST00000544223 C7orf26Q96N11 449 aa13.65□□□□□ -0.22
HCFC2-202ENST00000544223 RILPQ96NA2 401 aa13.65□□□□□ -0.22
HCFC2-202ENST00000544223 RETREG1Q9H6L5 497 aa13.65□□□□□ -0.22
HCFC2-202ENST00000544223 ZFP69BQ9UJL9 534 aa13.65□□□□□ -0.22
HCFC2-202ENST00000544223 G3BP2Q9UN86 482 aaKnown RBP13.65□□□□□ -0.22
HCFC2-202ENST00000544223 PIKFYVEQ9Y2I7 2098 aa13.65□□□□□ -0.22
HCFC2-202ENST00000544223 ARIH1Q9Y4X5 557 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms