RNA–Protein interactions for RNA: ENST00000543475.1

SMCR5-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 5, humanhuman

BASIC

Gene SMCR5, Length 2,844 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR5-201ENST00000543475 PTGDR2Q9Y5Y4 395 aa12.54□□□□□ -0.4
SMCR5-201ENST00000543475 ST14Q9Y5Y6 855 aa12.54□□□□□ -0.4
SMCR5-201ENST00000543475 MYLKQ15746 1914 aa12.54□□□□□ -0.4
SMCR5-201ENST00000543475 SBF1O95248 1867 aa12.54□□□□□ -0.4
SMCR5-201ENST00000543475 LOC285556D6RIA3 1793 aa12.54□□□□□ -0.4
SMCR5-201ENST00000543475 I6L893 689 aaPredicted RBP12.54□□□□□ -0.4
SMCR5-201ENST00000543475 ABCB7O75027 752 aa12.54□□□□□ -0.4
SMCR5-201ENST00000543475 AXLP30530 894 aa12.54□□□□□ -0.4
SMCR5-201ENST00000543475 GSK3BP49841 420 aa12.54□□□□□ -0.4
SMCR5-201ENST00000543475 PLA2G16P53816 162 aa12.54□□□□□ -0.4
SMCR5-201ENST00000543475 RAD23AP54725 363 aa12.54□□□□□ -0.4
SMCR5-201ENST00000543475 CDH13P55290 713 aa12.54□□□□□ -0.4
SMCR5-201ENST00000543475 ACAP2Q15057 778 aa12.54□□□□□ -0.4
SMCR5-201ENST00000543475 UGT3A2Q3SY77 523 aa12.54□□□□□ -0.4
SMCR5-201ENST00000543475 PRAMEF18Q5VWM3 479 aa12.54□□□□□ -0.4
SMCR5-201ENST00000543475 NEPROQ6NW34 567 aa12.54□□□□□ -0.4
SMCR5-201ENST00000543475 TBPL2Q6SJ96 375 aa12.54□□□□□ -0.4
SMCR5-201ENST00000543475 CCDC80Q76M96 950 aa12.54□□□□□ -0.4
SMCR5-201ENST00000543475 KDELC2Q7Z4H8 507 aa12.54□□□□□ -0.4
SMCR5-201ENST00000543475 BTLAQ7Z6A9 289 aa12.54□□□□□ -0.4
SMCR5-201ENST00000543475 IFNLR1Q8IU57 520 aaPredicted RBP12.54□□□□□ -0.4
SMCR5-201ENST00000543475 CLYBLQ8N0X4 340 aa12.54□□□□□ -0.4
SMCR5-201ENST00000543475 LEMD2Q8NC56 503 aa12.54□□□□□ -0.4
SMCR5-201ENST00000543475 OSCP1Q8WVF1 389 aa12.54□□□□□ -0.4
SMCR5-201ENST00000543475 SH3YL1Q96HL8 342 aaPredicted RBP12.54□□□□□ -0.4
SMCR5-201ENST00000543475 BDH2Q9BUT1 245 aa12.54□□□□□ -0.4
SMCR5-201ENST00000543475 ALG9Q9H6U8 611 aa12.54□□□□□ -0.4
SMCR5-201ENST00000543475 HMG20AQ9NP66 347 aa12.54□□□□□ -0.4
SMCR5-201ENST00000543475 GPRC5DQ9NZD1 345 aa12.54□□□□□ -0.4
SMCR5-201ENST00000543475 GMIPQ9P107 970 aa12.54□□□□□ -0.4
SMCR5-201ENST00000543475 PCDHA9Q9Y5H5 950 aa12.54□□□□□ -0.4
SMCR5-201ENST00000543475 PLXNA1Q9UIW2 1896 aa12.53□□□□□ -0.4
SMCR5-201ENST00000543475 TPD52L2O43399 206 aaKnown RBP12.53□□□□□ -0.4
SMCR5-201ENST00000543475 HUS1O60921 280 aa12.53□□□□□ -0.4
SMCR5-201ENST00000543475 RSL1D1O76021 490 aaKnown RBP12.53□□□□□ -0.4
SMCR5-201ENST00000543475 NR4A1P22736 598 aa12.53□□□□□ -0.4
SMCR5-201ENST00000543475 HCAR3P49019 387 aa12.53□□□□□ -0.4
SMCR5-201ENST00000543475 AIF1P55008 147 aa12.53□□□□□ -0.4
SMCR5-201ENST00000543475 BCL2A1Q16548 175 aa12.53□□□□□ -0.4
SMCR5-201ENST00000543475 FUT11Q495W5 492 aa12.53□□□□□ -0.4
SMCR5-201ENST00000543475 RABL3Q5HYI8 236 aa12.53□□□□□ -0.4
SMCR5-201ENST00000543475 FBXO47Q5MNV8 452 aa12.53□□□□□ -0.4
SMCR5-201ENST00000543475 ZNF678Q5SXM1 525 aa12.53□□□□□ -0.4
SMCR5-201ENST00000543475 ZNF362Q5T0B9 420 aaPredicted RBP12.53□□□□□ -0.4
SMCR5-201ENST00000543475 MFSD4BQ5TF39 518 aa12.53□□□□□ -0.4
SMCR5-201ENST00000543475 C9orf57Q5W0N0 161 aa12.53□□□□□ -0.4
SMCR5-201ENST00000543475 NTAN1Q96AB6 310 aa12.53□□□□□ -0.4
SMCR5-201ENST00000543475 SLC30A3Q99726 388 aa12.53□□□□□ -0.4
SMCR5-201ENST00000543475 MUC13Q9H3R2 512 aa12.53□□□□□ -0.4
SMCR5-201ENST00000543475 ERAP1Q9NZ08 941 aa12.53□□□□□ -0.4
SMCR5-201ENST00000543475 HACL1Q9UJ83 578 aa12.53□□□□□ -0.4
SMCR5-201ENST00000543475 SLC27A5Q9Y2P5 690 aa12.53□□□□□ -0.4
SMCR5-201ENST00000543475 VWA7Q9Y334 891 aa12.53□□□□□ -0.4
SMCR5-201ENST00000543475 DNAJC15Q9Y5T4 150 aa12.53□□□□□ -0.4
SMCR5-201ENST00000543475 SNX10Q9Y5X0 201 aa12.53□□□□□ -0.4
SMCR5-201ENST00000543475 TCRBV5S2A0A599 114 aa12.53□□□□□ -0.4
SMCR5-201ENST00000543475 CLDN5O00501 218 aa12.53□□□□□ -0.4
SMCR5-201ENST00000543475 ANXA9O76027 345 aa12.53□□□□□ -0.4
SMCR5-201ENST00000543475 BEST1O76090 585 aa12.53□□□□□ -0.4
SMCR5-201ENST00000543475 OXSR1O95747 527 aaPredicted RBP12.53□□□□□ -0.4
SMCR5-201ENST00000543475 UMPSP11172 480 aa12.53□□□□□ -0.4
SMCR5-201ENST00000543475 BDNFP23560 247 aa12.53□□□□□ -0.4
SMCR5-201ENST00000543475 HPCAL1P37235 193 aa12.53□□□□□ -0.4
SMCR5-201ENST00000543475 LIPEQ05469 1076 aa12.53□□□□□ -0.4
SMCR5-201ENST00000543475 NFYCQ13952 458 aa12.53□□□□□ -0.4
SMCR5-201ENST00000543475 GRB7Q14451 532 aa12.53□□□□□ -0.4
SMCR5-201ENST00000543475 SPCS2Q15005 226 aa12.53□□□□□ -0.4
SMCR5-201ENST00000543475 ARL13BQ3SXY8 428 aa12.53□□□□□ -0.4
SMCR5-201ENST00000543475 AASDHQ4L235 1098 aaPredicted RBP12.53□□□□□ -0.4
SMCR5-201ENST00000543475 ZNF789Q5FWF6 425 aa12.53□□□□□ -0.4
SMCR5-201ENST00000543475 GTF2IRD2BQ6EKJ0 949 aa12.53□□□□□ -0.4
SMCR5-201ENST00000543475 CRTC3Q6UUV7 619 aa12.53□□□□□ -0.4
SMCR5-201ENST00000543475 GTF2IRD2Q86UP8 949 aa12.53□□□□□ -0.4
SMCR5-201ENST00000543475 SMG8Q8ND04 991 aaKnown RBP12.53□□□□□ -0.4
SMCR5-201ENST00000543475 HPS1Q92902 700 aa12.53□□□□□ -0.4
SMCR5-201ENST00000543475 EXT2Q93063 718 aa12.53□□□□□ -0.4
SMCR5-201ENST00000543475 TMEM125Q96AQ2 219 aa12.53□□□□□ -0.4
SMCR5-201ENST00000543475 RNF145Q96MT1 663 aa12.53□□□□□ -0.4
SMCR5-201ENST00000543475 SLC2A13Q96QE2 648 aa12.53□□□□□ -0.4
SMCR5-201ENST00000543475 DUSP16Q9BY84 665 aa12.53□□□□□ -0.4
SMCR5-201ENST00000543475 TRIM54Q9BYV2 358 aa12.53□□□□□ -0.4
SMCR5-201ENST00000543475 WDR6Q9NNW5 1121 aaKnown RBP12.53□□□□□ -0.4
SMCR5-201ENST00000543475 SPATA7Q9P0W8 599 aa12.53□□□□□ -0.4
SMCR5-201ENST00000543475 MCM3APO60318 1980 aa12.53□□□□□ -0.4
SMCR5-201ENST00000543475 FNDC1Q4ZHG4 1894 aaPredicted RBP12.52□□□□□ -0.4
SMCR5-201ENST00000543475 PIP5K1BO14986 540 aa12.52□□□□□ -0.4
SMCR5-201ENST00000543475 SHMT2P34897 504 aa12.52□□□□□ -0.4
SMCR5-201ENST00000543475 SCAPQ12770 1279 aa12.52□□□□□ -0.4
SMCR5-201ENST00000543475 SPATS1Q496A3 300 aa12.52□□□□□ -0.4
SMCR5-201ENST00000543475 TMEM214Q6NUQ4 689 aaKnown RBP12.52□□□□□ -0.4
SMCR5-201ENST00000543475 KRT27Q7Z3Y8 459 aa12.52□□□□□ -0.4
SMCR5-201ENST00000543475 R3HCC1LQ7Z5L2 792 aaKnown RBP12.52□□□□□ -0.4
SMCR5-201ENST00000543475 ITIH5Q86UX2 942 aa12.52□□□□□ -0.4
SMCR5-201ENST00000543475 CADM3Q8N126 398 aa12.52□□□□□ -0.4
SMCR5-201ENST00000543475 PAPD5Q8NDF8 572 aaKnown RBP12.52□□□□□ -0.4
SMCR5-201ENST00000543475 APPL2Q8NEU8 664 aa12.52□□□□□ -0.4
SMCR5-201ENST00000543475 ANKRD49Q8WVL7 239 aa12.52□□□□□ -0.4
SMCR5-201ENST00000543475 TUBGCP3Q96CW5 907 aa12.52□□□□□ -0.4
SMCR5-201ENST00000543475 TSPAN17Q96FV3 270 aa12.52□□□□□ -0.4
SMCR5-201ENST00000543475 TNIP3Q96KP6 325 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms