RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 MYPNQ86TC9 1320 aa13.11□□□□□ -0.31
TNC-212ENST00000542877 TBL1XO60907 577 aa13.11□□□□□ -0.31
TNC-212ENST00000542877 HLA-DQA2P01906 255 aa13.11□□□□□ -0.31
TNC-212ENST00000542877 PIRTP0C851 137 aa13.11□□□□□ -0.31
TNC-212ENST00000542877 MAPK9P45984 424 aa13.11□□□□□ -0.31
TNC-212ENST00000542877 RNASEH2BQ5TBB1 312 aaKnown RBP13.11□□□□□ -0.31
TNC-212ENST00000542877 HECTD2Q5U5R9 776 aa13.11□□□□□ -0.31
TNC-212ENST00000542877 ERICH5Q6P6B1 374 aa13.11□□□□□ -0.31
TNC-212ENST00000542877 AKAP14Q86UN6 197 aa13.11□□□□□ -0.31
TNC-212ENST00000542877 CAMKK1Q8N5S9 505 aa13.11□□□□□ -0.31
TNC-212ENST00000542877 PLD5Q8N7P1 536 aa13.11□□□□□ -0.31
TNC-212ENST00000542877 GRIN3AQ8TCU5 1115 aa13.11□□□□□ -0.31
TNC-212ENST00000542877 CDCA5Q96FF9 252 aa13.11□□□□□ -0.31
TNC-212ENST00000542877 COPS8Q99627 209 aa13.11□□□□□ -0.31
TNC-212ENST00000542877 CIB1Q99828 191 aa13.11□□□□□ -0.31
TNC-212ENST00000542877 RBM4BQ9BQ04 359 aaKnown RBP13.11□□□□□ -0.31
TNC-212ENST00000542877 MRPL45Q9BRJ2 306 aaKnown RBP13.11□□□□□ -0.31
TNC-212ENST00000542877 RBM4Q9BWF3 364 aaKnown RBP13.11□□□□□ -0.31
TNC-212ENST00000542877 TRMT13Q9NUP7 481 aaKnown RBP13.11□□□□□ -0.31
TNC-212ENST00000542877 ING3Q9NXR8 418 aa13.11□□□□□ -0.31
TNC-212ENST00000542877 TRAV19A0A0A6YYK7 116 aa13.11□□□□□ -0.31
TNC-212ENST00000542877 CCDC189A1A4V9 331 aa13.11□□□□□ -0.31
TNC-212ENST00000542877 TRMUO75648 421 aaKnown RBP13.11□□□□□ -0.31
TNC-212ENST00000542877 ZNF24P17028 368 aa13.11□□□□□ -0.31
TNC-212ENST00000542877 BEX3Q00994 111 aa13.11□□□□□ -0.31
TNC-212ENST00000542877 RNF220Q5VTB9 566 aa13.11□□□□□ -0.31
TNC-212ENST00000542877 ZYG11AQ6WRX3 759 aa13.11□□□□□ -0.31
TNC-212ENST00000542877 SLC26A9Q7LBE3 791 aa13.11□□□□□ -0.31
TNC-212ENST00000542877 COL26A1Q96A83 441 aa13.11□□□□□ -0.31
TNC-212ENST00000542877 TM6SF2Q9BZW4 377 aa13.11□□□□□ -0.31
TNC-212ENST00000542877 PIGUQ9H490 435 aa13.11□□□□□ -0.31
TNC-212ENST00000542877 GIT1Q9Y2X7 761 aa13.11□□□□□ -0.31
TNC-212ENST00000542877 DISP2A7MBM2 1401 aa13.11□□□□□ -0.31
TNC-212ENST00000542877 CWF19L1Q69YN2 538 aaKnown RBP13.11□□□□□ -0.31
TNC-212ENST00000542877 DCLRE1AQ6PJP8 1040 aa13.11□□□□□ -0.31
TNC-212ENST00000542877 RASAL3Q86YV0 1011 aa13.11□□□□□ -0.31
TNC-212ENST00000542877 SPPL2CQ8IUH8 684 aa13.11□□□□□ -0.31
TNC-212ENST00000542877 CPXM1Q96SM3 734 aa13.11□□□□□ -0.31
TNC-212ENST00000542877 TRIM39Q9HCM9 518 aa13.11□□□□□ -0.31
TNC-212ENST00000542877 ZNF222Q9UK12 451 aa13.11□□□□□ -0.31
TNC-212ENST00000542877 FBXO10Q9UK96 956 aa13.11□□□□□ -0.31
TNC-212ENST00000542877 KIDINS220Q9ULH0 1771 aa13.1□□□□□ -0.31
TNC-212ENST00000542877 WWP2O00308 870 aa13.1□□□□□ -0.31
TNC-212ENST00000542877 FAM155BO75949 473 aa13.1□□□□□ -0.31
TNC-212ENST00000542877 CHRNGP07510 517 aa13.1□□□□□ -0.31
TNC-212ENST00000542877 SP100P23497 879 aaPredicted RBP13.1□□□□□ -0.31
TNC-212ENST00000542877 TGFBR2P37173 567 aa13.1□□□□□ -0.31
TNC-212ENST00000542877 POLR2JP52435 117 aaKnown RBP13.1□□□□□ -0.31
TNC-212ENST00000542877 TAF13Q15543 124 aa13.1□□□□□ -0.31
TNC-212ENST00000542877 TCEA2Q15560 299 aa13.1□□□□□ -0.31
TNC-212ENST00000542877 COLGALT2Q8IYK4 626 aa13.1□□□□□ -0.31
TNC-212ENST00000542877 GPC2Q8N158 579 aa13.1□□□□□ -0.31
TNC-212ENST00000542877 CLPTM1LQ96KA5 538 aa13.1□□□□□ -0.31
TNC-212ENST00000542877 MTFR1LQ9H019 292 aa13.1□□□□□ -0.31
TNC-212ENST00000542877 BRD9Q9H8M2 597 aa13.1□□□□□ -0.31
TNC-212ENST00000542877 EURLQ9NYK6 297 aa13.1□□□□□ -0.31
TNC-212ENST00000542877 PCDHGC3Q9UN70 934 aa13.1□□□□□ -0.31
TNC-212ENST00000542877 TCRBV7S2A1N4TA0A589 114 aa13.1□□□□□ -0.31
TNC-212ENST00000542877 PSMD11O00231 422 aa13.1□□□□□ -0.31
TNC-212ENST00000542877 PLK4O00444 970 aa13.1□□□□□ -0.31
TNC-212ENST00000542877 LRCH4O75427 683 aa13.1□□□□□ -0.31
TNC-212ENST00000542877 RPP40O75818 363 aaKnown RBP13.1□□□□□ -0.31
TNC-212ENST00000542877 MSX2P35548 267 aaPredicted RBP13.1□□□□□ -0.31
TNC-212ENST00000542877 GPR1P46091 355 aa13.1□□□□□ -0.31
TNC-212ENST00000542877 CRYBB1P53674 252 aaPredicted RBP13.1□□□□□ -0.31
TNC-212ENST00000542877 LGALS3BPQ08380 585 aa13.1□□□□□ -0.31
TNC-212ENST00000542877 CNSTQ6PJW8 725 aa13.1□□□□□ -0.31
TNC-212ENST00000542877 CCDC80Q76M96 950 aa13.1□□□□□ -0.31
TNC-212ENST00000542877 MON1AQ86VX9 555 aa13.1□□□□□ -0.31
TNC-212ENST00000542877 LPGAT1Q92604 370 aa13.1□□□□□ -0.31
TNC-212ENST00000542877 FGFBP2Q9BYJ0 223 aa13.1□□□□□ -0.31
TNC-212ENST00000542877 NDOR1Q9UHB4 597 aa13.1□□□□□ -0.31
TNC-212ENST00000542877 CHURC1-FNTBB4DL54 471 aa13.1□□□□□ -0.31
TNC-212ENST00000542877 C4BPAP04003 597 aaKnown RBP13.1□□□□□ -0.31
TNC-212ENST00000542877 CCNYL3P0C7X3 344 aa13.1□□□□□ -0.31
TNC-212ENST00000542877 CYP4B1P13584 511 aa13.1□□□□□ -0.31
TNC-212ENST00000542877 HDCP19113 662 aa13.1□□□□□ -0.31
TNC-212ENST00000542877 GNPDA1P46926 289 aa13.1□□□□□ -0.31
TNC-212ENST00000542877 HNMTP50135 292 aa13.1□□□□□ -0.31
TNC-212ENST00000542877 HADHBP55084 474 aaKnown RBP13.1□□□□□ -0.31
TNC-212ENST00000542877 MTTPP55157 894 aa13.1□□□□□ -0.31
TNC-212ENST00000542877 RHAGQ02094 409 aa13.1□□□□□ -0.31
TNC-212ENST00000542877 BICRALQ6AI39 1079 aa13.1□□□□□ -0.31
TNC-212ENST00000542877 TCAIMQ8N3R3 496 aa13.1□□□□□ -0.31
TNC-212ENST00000542877 TTYH3Q9C0H2 523 aa13.1□□□□□ -0.31
TNC-212ENST00000542877 NEK6Q9HC98 313 aa13.1□□□□□ -0.31
TNC-212ENST00000542877 SMPD3Q9NY59 655 aaPredicted RBP13.1□□□□□ -0.31
TNC-212ENST00000542877 MROH1Q8NDA8 1641 aa13.1□□□□□ -0.31
TNC-212ENST00000542877 LOC110117498-PIK3R3F6TDL0 507 aa13.1□□□□□ -0.31
TNC-212ENST00000542877 AGPSO00116 658 aa13.1□□□□□ -0.31
TNC-212ENST00000542877 DNM1LO00429 736 aa13.1□□□□□ -0.31
TNC-212ENST00000542877 CLDN5O00501 218 aa13.1□□□□□ -0.31
TNC-212ENST00000542877 DNAJA2O60884 412 aa13.1□□□□□ -0.31
TNC-212ENST00000542877 CILPO75339 1184 aa13.1□□□□□ -0.31
TNC-212ENST00000542877 LRATO95237 230 aa13.1□□□□□ -0.31
TNC-212ENST00000542877 MTHFRP42898 656 aa13.1□□□□□ -0.31
TNC-212ENST00000542877 LIMK2P53671 638 aa13.1□□□□□ -0.31
TNC-212ENST00000542877 VGLL4Q14135 290 aa13.1□□□□□ -0.31
TNC-212ENST00000542877 INTS6LQ5JSJ4 861 aaKnown RBP13.1□□□□□ -0.31
TNC-212ENST00000542877 C9orf57Q5W0N0 161 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms