RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 C8BP07358 591 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 HMBSP08397 361 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 VCLP18206 1134 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 PKNOX1P55347 436 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 PSME3P61289 254 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 MRPS22P82650 360 aaKnown RBP6.54□□□□□ -1.36
PTPRO-208ENST00000542557 MS4A2Q01362 244 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 CAP1Q01518 475 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 GNA12Q03113 381 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 GALNT3Q14435 633 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 SEMA3AQ14563 771 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 GRAMD1BQ3KR37 738 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 IRAK1BP1Q5VVH5 260 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 C8orf82Q6P1X6 216 aaPredicted RBP6.54□□□□□ -1.36
PTPRO-208ENST00000542557 KLHDC10Q6PID8 442 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 AFTPHQ6ULP2 937 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 RSPO2Q6UXX9 243 aaPredicted RBP6.54□□□□□ -1.36
PTPRO-208ENST00000542557 CYHR1Q6ZMK1 362 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 RNF19BQ6ZMZ0 732 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 ANKS3Q6ZW76 656 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 RAB44Q7Z6P3 723 aaPredicted RBP6.54□□□□□ -1.36
PTPRO-208ENST00000542557 LDB1Q86U70 411 aaPredicted RBP6.54□□□□□ -1.36
PTPRO-208ENST00000542557 MFN1Q8IWA4 741 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 ST13P4Q8IZP2 240 aaPredicted RBP6.54□□□□□ -1.36
PTPRO-208ENST00000542557 LGI2Q8N0V4 545 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 CLYBLQ8N0X4 340 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 MARVELD2Q8N4S9 558 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 PDZD8Q8NEN9 1154 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 BHLHE22Q8NFJ8 381 aaPredicted RBP6.54□□□□□ -1.36
PTPRO-208ENST00000542557 USP13Q92995 863 aaPredicted RBP6.54□□□□□ -1.36
PTPRO-208ENST00000542557 C19orf60Q96EN9 201 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 TMA16Q96EY4 203 aaKnown RBP6.54□□□□□ -1.36
PTPRO-208ENST00000542557 LRGUKQ96M69 825 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 ATOH8Q96SQ7 321 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 TCF12Q99081 682 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 YIPF3Q9GZM5 350 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 SYTL2Q9HCH5 934 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 PCDH12Q9NPG4 1184 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 RNF186Q9NXI6 227 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 EPS15L1Q9UBC2 864 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 DNMT3LQ9UJW3 386 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 RAB26Q9ULW5 256 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 TBC1D30Q9Y2I9 924 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 ARL5AQ9Y689 179 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 GBF1Q92538 1859 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 A0A1W2PQ45 241 aaPredicted RBP6.54□□□□□ -1.36
PTPRO-208ENST00000542557 A0A1W2PQY0 241 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 H3BNC9 293 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 CFLARO15519 480 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 DENRO43583 198 aaKnown RBP6.54□□□□□ -1.36
PTPRO-208ENST00000542557 AHCYL1O43865 530 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 KERAO60938 352 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 GPC4O75487 556 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 SUPT7LO94864 414 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 ALDH2P05091 517 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 SNRPB2P08579 225 aaKnown RBP6.54□□□□□ -1.36
PTPRO-208ENST00000542557 SELPP16109 830 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 ATF6P18850 670 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 CR2P20023 1033 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 CD9P21926 228 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 CES1P23141 567 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 HSD3B2P26439 372 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 KCNC1P48547 511 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 HSPA13P48723 471 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 SLC11A1P49279 550 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 SLC11A2P49281 568 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 TRAP1Q12931 704 aaKnown RBP6.54□□□□□ -1.36
PTPRO-208ENST00000542557 LRRC36Q1X8D7 754 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 PUS10Q3MIT2 529 aaKnown RBP6.54□□□□□ -1.36
PTPRO-208ENST00000542557 UGT3A2Q3SY77 523 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 MMEL1Q495T6 779 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 RTP2Q5QGT7 225 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 CHST9Q7L1S5 443 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 PTGR2Q8N8N7 351 aaPredicted RBP6.54□□□□□ -1.36
PTPRO-208ENST00000542557 OR13C4Q8NGS5 318 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 DUS3LQ96G46 650 aaKnown RBP6.54□□□□□ -1.36
PTPRO-208ENST00000542557 DCUN1D1Q96GG9 259 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 CDKN2AIPNLQ96HQ2 116 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 CYP2S1Q96SQ9 504 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 MRPL9Q9BYD2 267 aaKnown RBP6.54□□□□□ -1.36
PTPRO-208ENST00000542557 DERL2Q9GZP9 239 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 Q9H521 79 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 SPAG4Q9NPE6 437 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 UBA2Q9UBT2 640 aaPredicted RBP6.54□□□□□ -1.36
PTPRO-208ENST00000542557 PACSIN3Q9UKS6 424 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 CNOT11Q9UKZ1 510 aaKnown RBP6.54□□□□□ -1.36
PTPRO-208ENST00000542557 SLC27A5Q9Y2P5 690 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 CRYL1Q9Y2S2 319 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 FIS1Q9Y3D6 152 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 PCDHB7Q9Y5E2 793 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 FBP2O00757 339 aa6.53□□□□□ -1.36
PTPRO-208ENST00000542557 KDELR3O43731 214 aa6.53□□□□□ -1.36
PTPRO-208ENST00000542557 CLDN11O75508 207 aa6.53□□□□□ -1.36
PTPRO-208ENST00000542557 GJB3O75712 270 aa6.53□□□□□ -1.36
PTPRO-208ENST00000542557 TRPA1O75762 1119 aa6.53□□□□□ -1.36
PTPRO-208ENST00000542557 MTHFD2P13995 350 aa6.53□□□□□ -1.36
PTPRO-208ENST00000542557 SLC6A4P31645 630 aa6.53□□□□□ -1.36
PTPRO-208ENST00000542557 ARPP19P56211 112 aa6.53□□□□□ -1.36
PTPRO-208ENST00000542557 STX1BP61266 288 aa6.53□□□□□ -1.36
PTPRO-208ENST00000542557 ATP6V0D1P61421 351 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms