RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 HLTFQ14527 1009 aaKnown RBP eCLIP15.62■□□□□ 0.09
VPS33A-206ENST00000542310 ZSCAN23Q3MJ62 389 aa15.62■□□□□ 0.09
VPS33A-206ENST00000542310 ANKRD20A8PQ5CZ79 823 aa15.62■□□□□ 0.09
VPS33A-206ENST00000542310 HSD11B1LQ7Z5J1 315 aa15.62■□□□□ 0.09
VPS33A-206ENST00000542310 VSIG1Q86XK7 387 aa15.62■□□□□ 0.09
VPS33A-206ENST00000542310 CCNJLQ8IV13 435 aa15.62■□□□□ 0.09
VPS33A-206ENST00000542310 GPBAR1Q8TDU6 330 aa15.62■□□□□ 0.09
VPS33A-206ENST00000542310 PIH1D2Q8WWB5 315 aa15.62■□□□□ 0.09
VPS33A-206ENST00000542310 HDAC11Q96DB2 347 aa15.62■□□□□ 0.09
VPS33A-206ENST00000542310 DNAJC7Q99615 494 aa15.62■□□□□ 0.09
VPS33A-206ENST00000542310 SEMA3CQ99985 751 aa15.62■□□□□ 0.09
VPS33A-206ENST00000542310 GSDMCQ9BYG8 508 aa15.62■□□□□ 0.09
VPS33A-206ENST00000542310 XPO4Q9C0E2 1151 aaKnown RBP15.62■□□□□ 0.09
VPS33A-206ENST00000542310 STRADBQ9C0K7 418 aa15.62■□□□□ 0.09
VPS33A-206ENST00000542310 TMEM168Q9H0V1 697 aa15.62■□□□□ 0.09
VPS33A-206ENST00000542310 LRRN3Q9H3W5 708 aa15.62■□□□□ 0.09
VPS33A-206ENST00000542310 CYP4F12Q9HCS2 524 aa15.62■□□□□ 0.09
VPS33A-206ENST00000542310 TRNAU1APQ9NX07 287 aaKnown RBP15.62■□□□□ 0.09
VPS33A-206ENST00000542310 CTTNBP2NLQ9P2B4 639 aa15.62■□□□□ 0.09
VPS33A-206ENST00000542310 SSUH2Q9Y2M2 353 aa15.62■□□□□ 0.09
VPS33A-206ENST00000542310 RAI2Q9Y5P3 530 aa15.62■□□□□ 0.09
VPS33A-206ENST00000542310 FASNP49327 2511 aaKnown RBP15.62■□□□□ 0.09
VPS33A-206ENST00000542310 A0A1W2PQM1 296 aa15.61■□□□□ 0.09
VPS33A-206ENST00000542310 A8MX80 341 aa15.61■□□□□ 0.09
VPS33A-206ENST00000542310 MATN3O15232 486 aa15.61■□□□□ 0.09
VPS33A-206ENST00000542310 IVLP07476 585 aa15.61■□□□□ 0.09
VPS33A-206ENST00000542310 CCNB1P14635 433 aa15.61■□□□□ 0.09
VPS33A-206ENST00000542310 ETV3P41162 512 aa15.61■□□□□ 0.09
VPS33A-206ENST00000542310 INHBCP55103 352 aa15.61■□□□□ 0.09
VPS33A-206ENST00000542310 RPL26P61254 145 aaKnown RBP15.61■□□□□ 0.09
VPS33A-206ENST00000542310 ILF3Q12906 894 aaKnown RBP eCLIP15.61■□□□□ 0.09
VPS33A-206ENST00000542310 TCEA2Q15560 299 aa15.61■□□□□ 0.09
VPS33A-206ENST00000542310 SPECC1LQ69YQ0 1117 aa15.61■□□□□ 0.09
VPS33A-206ENST00000542310 RAET1GQ6H3X3 334 aa15.61■□□□□ 0.09
VPS33A-206ENST00000542310 ZNF765Q7L2R6 523 aa15.61■□□□□ 0.09
VPS33A-206ENST00000542310 TECPR1Q7Z6L1 1165 aa15.61■□□□□ 0.09
VPS33A-206ENST00000542310 NLRP8Q86W28 1048 aa15.61■□□□□ 0.09
VPS33A-206ENST00000542310 KCTD6Q8NC69 237 aa15.61■□□□□ 0.09
VPS33A-206ENST00000542310 FAM46DQ8NEK8 389 aa15.61■□□□□ 0.09
VPS33A-206ENST00000542310 SNRNP27Q8WVK2 155 aaKnown RBP15.61■□□□□ 0.09
VPS33A-206ENST00000542310 TMEM159Q96B96 161 aa15.61■□□□□ 0.09
VPS33A-206ENST00000542310 TDRD1Q9BXT4 1180 aaKnown RBP15.61■□□□□ 0.09
VPS33A-206ENST00000542310 CARS2Q9HA77 564 aaKnown RBP15.61■□□□□ 0.09
VPS33A-206ENST00000542310 RPL26L1Q9UNX3 145 aaKnown RBP15.61■□□□□ 0.09
VPS33A-206ENST00000542310 SLC17A4Q9Y2C5 497 aa15.61■□□□□ 0.09
VPS33A-206ENST00000542310 A0A0J9YYE9 177 aa15.6■□□□□ 0.09
VPS33A-206ENST00000542310 CAPN8A6NHC0 703 aa15.6■□□□□ 0.09
VPS33A-206ENST00000542310 B4DGG1 531 aa15.6■□□□□ 0.09
VPS33A-206ENST00000542310 PLD2O14939 933 aa15.6■□□□□ 0.09
VPS33A-206ENST00000542310 TRBC1P01850 177 aa15.6■□□□□ 0.09
VPS33A-206ENST00000542310 CEACAM5P06731 702 aa15.6■□□□□ 0.09
VPS33A-206ENST00000542310 TMEM253P0C7T8 217 aa15.6■□□□□ 0.09
VPS33A-206ENST00000542310 GJC1P36383 396 aa15.6■□□□□ 0.09
VPS33A-206ENST00000542310 CXADRP78310 365 aa15.6■□□□□ 0.09
VPS33A-206ENST00000542310 CCL7P80098 99 aa15.6■□□□□ 0.09
VPS33A-206ENST00000542310 NR1D2Q14995 579 aa15.6■□□□□ 0.09
VPS33A-206ENST00000542310 CLPPQ16740 277 aaPredicted RBP15.6■□□□□ 0.09
VPS33A-206ENST00000542310 ASTE1Q2TB18 679 aaPredicted RBP15.6■□□□□ 0.09
VPS33A-206ENST00000542310 LRRC66Q68CR7 880 aa15.6■□□□□ 0.09
VPS33A-206ENST00000542310 ADAMTSL4Q6UY14 1074 aa15.6■□□□□ 0.09
VPS33A-206ENST00000542310 Q6ZVL8 140 aa15.6■□□□□ 0.09
VPS33A-206ENST00000542310 ZNF438Q7Z4V0 828 aa15.6■□□□□ 0.09
VPS33A-206ENST00000542310 SPRED1Q7Z699 444 aa15.6■□□□□ 0.09
VPS33A-206ENST00000542310 B3GNT8Q7Z7M8 397 aa15.6■□□□□ 0.09
VPS33A-206ENST00000542310 TSPAN33Q86UF1 283 aa15.6■□□□□ 0.09
VPS33A-206ENST00000542310 C17orf82Q86X59 251 aaPredicted RBP15.6■□□□□ 0.09
VPS33A-206ENST00000542310 OR8K1Q8NGG5 319 aa15.6■□□□□ 0.09
VPS33A-206ENST00000542310 SCARF2Q96GP6 870 aaPredicted RBP15.6■□□□□ 0.09
VPS33A-206ENST00000542310 ZNF830Q96NB3 372 aaPredicted RBP15.6■□□□□ 0.09
VPS33A-206ENST00000542310 LYSMD1Q96S90 227 aa15.6■□□□□ 0.09
VPS33A-206ENST00000542310 CDH19Q9H159 772 aa15.6■□□□□ 0.09
VPS33A-206ENST00000542310 DEF6Q9H4E7 631 aa15.6■□□□□ 0.09
VPS33A-206ENST00000542310 MOSPD1Q9UJG1 213 aa15.6■□□□□ 0.09
VPS33A-206ENST00000542310 ACSL6Q9UKU0 697 aa15.6■□□□□ 0.09
VPS33A-206ENST00000542310 PCDHGA7Q9Y5G6 932 aa15.6■□□□□ 0.09
VPS33A-206ENST00000542310 ERVH48-1M5A8F1 160 aa15.59■□□□□ 0.09
VPS33A-206ENST00000542310 TNFSF15O95150 251 aa15.59■□□□□ 0.09
VPS33A-206ENST00000542310 SOD1P00441 154 aa15.59■□□□□ 0.09
VPS33A-206ENST00000542310 PDHA1P08559 390 aa15.59■□□□□ 0.09
VPS33A-206ENST00000542310 EPHB1P54762 984 aa15.59■□□□□ 0.09
VPS33A-206ENST00000542310 TAS2R40P59535 323 aa15.59■□□□□ 0.09
VPS33A-206ENST00000542310 DENND2CQ68D51 928 aa15.59■□□□□ 0.09
VPS33A-206ENST00000542310 NRSN1Q8IZ57 195 aa15.59■□□□□ 0.09
VPS33A-206ENST00000542310 CCL4L1Q8NHW4 92 aa15.59■□□□□ 0.09
VPS33A-206ENST00000542310 NAF1Q96HR8 494 aaKnown RBP15.59■□□□□ 0.09
VPS33A-206ENST00000542310 PACSIN1Q9BY11 444 aa15.59■□□□□ 0.09
VPS33A-206ENST00000542310 DPEP2Q9H4A9 486 aa15.59■□□□□ 0.09
VPS33A-206ENST00000542310 EPB41L5Q9HCM4 733 aa15.59■□□□□ 0.09
VPS33A-206ENST00000542310 RBM22Q9NW64 420 aaKnown RBP eCLIP15.59■□□□□ 0.09
VPS33A-206ENST00000542310 ZNHIT6Q9NWK9 470 aaKnown RBP15.59■□□□□ 0.09
VPS33A-206ENST00000542310 SUFUQ9UMX1 484 aa15.59■□□□□ 0.09
VPS33A-206ENST00000542310 RNF215Q9Y6U7 377 aa15.59■□□□□ 0.09
VPS33A-206ENST00000542310 GOLGA6CA6NDK9 693 aa15.58■□□□□ 0.08
VPS33A-206ENST00000542310 GOLGA6BA6NDN3 693 aa15.58■□□□□ 0.08
VPS33A-206ENST00000542310 CASC3O15234 703 aaKnown RBP15.58■□□□□ 0.08
VPS33A-206ENST00000542310 KLK10O43240 276 aa15.58■□□□□ 0.08
VPS33A-206ENST00000542310 ZW10O43264 779 aa15.58■□□□□ 0.08
VPS33A-206ENST00000542310 HLA-DQB2P05538 268 aa15.58■□□□□ 0.08
VPS33A-206ENST00000542310 TPM1P09493 284 aa15.58■□□□□ 0.08
VPS33A-206ENST00000542310 GOLGA6DP0CG33 693 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms