RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 DNAJB1P25685 340 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 PBLDP30039 288 aaPredicted RBP4.35□□□□□ -1.71
SNHG1-219ENST00000542112 HOXC12P31275 282 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 ADMP35318 185 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 HPCAL1P37235 193 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 CASP3P42574 277 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 MASP1P48740 699 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 POU3F4P49335 361 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 CCT3P49368 545 aaKnown RBP4.35□□□□□ -1.71
SNHG1-219ENST00000542112 SULT1E1P49888 294 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 MTHFSP49914 203 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 TPMTP51580 245 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 CLCN4P51793 760 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 HK3P52790 923 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 ATP12AP54707 1039 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 DEFA1P59665 94 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 DEFA3P59666 94 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 PTENP60484 403 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 AP1S1P61966 158 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 YWHAGP61981 247 aaKnown RBP eCLIP4.35□□□□□ -1.71
SNHG1-219ENST00000542112 BTKQ06187 659 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 TRAF2Q12933 501 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 NFATC3Q12968 1075 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 CALCOCO2Q13137 446 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 PAK1Q13153 545 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 SEMA3BQ13214 749 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 KCNAB2Q13303 367 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 PLD1Q13393 1074 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 GALEQ14376 348 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 KCNJ12Q14500 433 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 STAT4Q14765 748 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 PPA1Q15181 289 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 PUM3Q15397 648 aaKnown RBP4.35□□□□□ -1.71
SNHG1-219ENST00000542112 LTB4RQ15722 352 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 CPSF6Q16630 551 aaKnown RBP eCLIP4.35□□□□□ -1.71
SNHG1-219ENST00000542112 CLEC16AQ2KHT3 1053 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 FNDC3BQ53EP0 1204 aaKnown RBP4.35□□□□□ -1.71
SNHG1-219ENST00000542112 SETMARQ53H47 684 aaPredicted RBP4.35□□□□□ -1.71
SNHG1-219ENST00000542112 XKR9Q5GH70 373 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 UBAP2Q5T6F2 1119 aaKnown RBP4.35□□□□□ -1.71
SNHG1-219ENST00000542112 TEDDM1Q5T9Z0 273 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 AGAP6Q5VW22 663 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 KRT79Q5XKE5 535 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 RINT1Q6NUQ1 792 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 FUT10Q6P4F1 479 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 ERICH5Q6P6B1 374 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 RFWD3Q6PCD5 774 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 SHC4Q6S5L8 630 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 CYP20A1Q6UW02 462 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 C16orf54Q6UWD8 224 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 VSTM1Q6UX27 236 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 SYDE1Q6ZW31 735 aaPredicted RBP4.35□□□□□ -1.71
SNHG1-219ENST00000542112 MAMDC2Q7Z304 686 aaPredicted RBP4.35□□□□□ -1.71
SNHG1-219ENST00000542112 KCNK18Q7Z418 384 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 TFAP2DQ7Z6R9 452 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 TBC1D10CQ8IV04 446 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 GPALPP1Q8IXQ4 340 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 GRAMD1CQ8IYS0 662 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 RBFAQ8N0V3 343 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 PQLC1Q8N2U9 271 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 MFSD4AQ8N468 514 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 KLHL36Q8N4N3 616 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 SLC15A4Q8N697 577 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 OR7G3Q8NG95 312 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 WDR48Q8TAF3 677 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 ASZ1Q8WWH4 475 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 KCTD13Q8WZ19 329 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 GLG1Q92896 1179 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 NINJ1Q92982 152 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 PHKBQ93100 1093 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 TESCQ96BS2 214 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 CMTM5Q96DZ9 223 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 DCUN1D1Q96GG9 259 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 PAGE5Q96GU1 130 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 SH3YL1Q96HL8 342 aaPredicted RBP4.35□□□□□ -1.71
SNHG1-219ENST00000542112 Q96M66 194 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 MFSD14AQ96MC6 490 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 AGAP4Q96P64 663 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 KCNK16Q96T55 309 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 TCF25Q9BQ70 676 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 TMEM246Q9BRR3 403 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 TCEAL7Q9BRU2 100 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 CNPY3Q9BT09 278 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 ZNF416Q9BWM5 594 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 MRPL4Q9BYD3 311 aaKnown RBP4.35□□□□□ -1.71
SNHG1-219ENST00000542112 GPR62Q9BZJ7 368 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 EPB41L4BQ9H329 900 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 GHITMQ9H3K2 345 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 TFB2MQ9H5Q4 396 aaKnown RBP4.35□□□□□ -1.71
SNHG1-219ENST00000542112 NIPAL2Q9H841 368 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 JMJD4Q9H9V9 463 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 CXorf21Q9HAI6 301 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 MKNK2Q9HBH9 465 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 CRLF2Q9HC73 371 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 NCOA5Q9HCD5 579 aaKnown RBP4.35□□□□□ -1.71
SNHG1-219ENST00000542112 PNPLA8Q9NP80 782 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 SLC35C2Q9NQQ7 365 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 ZDHHC18Q9NUE0 388 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 UFSP2Q9NUQ7 469 aa4.35□□□□□ -1.71
SNHG1-219ENST00000542112 ACOXLQ9NUZ1 547 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms