RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 RTL3Q8N8U3 475 aaKnown RBP16.1■□□□□ 0.17
VARS2-212ENST00000542001 MAGED4Q96JG8 741 aa16.1■□□□□ 0.17
VARS2-212ENST00000542001 DNAJC28Q9NX36 388 aa16.1■□□□□ 0.17
VARS2-212ENST00000542001 KANSL3Q9P2N6 904 aa16.1■□□□□ 0.17
VARS2-212ENST00000542001 OPTCQ9UBM4 332 aa16.1■□□□□ 0.17
VARS2-212ENST00000542001 PTGESO14684 152 aa16.09■□□□□ 0.17
VARS2-212ENST00000542001 OR4F21O95013 312 aa16.09■□□□□ 0.17
VARS2-212ENST00000542001 ARSAP15289 507 aa16.09■□□□□ 0.17
VARS2-212ENST00000542001 UGT1A6P19224 532 aa16.09■□□□□ 0.17
VARS2-212ENST00000542001 HSPA13P48723 471 aa16.09■□□□□ 0.17
VARS2-212ENST00000542001 UBE3AQ05086 875 aa16.09■□□□□ 0.17
VARS2-212ENST00000542001 CRY1Q16526 586 aa16.09■□□□□ 0.17
VARS2-212ENST00000542001 RGMBQ6NW40 437 aa16.09■□□□□ 0.17
VARS2-212ENST00000542001 LRRC8DQ7L1W4 858 aa16.09■□□□□ 0.17
VARS2-212ENST00000542001 P3H2Q8IVL5 708 aa16.09■□□□□ 0.17
VARS2-212ENST00000542001 OLIG1Q8TAK6 271 aa16.09■□□□□ 0.17
VARS2-212ENST00000542001 AUTS2Q8WXX7 1259 aa16.09■□□□□ 0.17
VARS2-212ENST00000542001 CEP19Q96LK0 163 aa16.09■□□□□ 0.17
VARS2-212ENST00000542001 COQ10BQ9H8M1 238 aa16.09■□□□□ 0.17
VARS2-212ENST00000542001 DNMT3LQ9UJW3 386 aa16.09■□□□□ 0.17
VARS2-212ENST00000542001 VPS9D1Q9Y2B5 631 aa16.09■□□□□ 0.17
VARS2-212ENST00000542001 FCF1Q9Y324 198 aaKnown RBP16.09■□□□□ 0.17
VARS2-212ENST00000542001 MTF2Q9Y483 593 aaPredicted RBP16.09■□□□□ 0.17
VARS2-212ENST00000542001 HS3ST4Q9Y661 456 aa16.09■□□□□ 0.17
VARS2-212ENST00000542001 AHDC1Q5TGY3 1603 aaPredicted RBP16.09■□□□□ 0.17
VARS2-212ENST00000542001 CFAP99D6REC4 459 aa16.09■□□□□ 0.17
VARS2-212ENST00000542001 H7C4K7 107 aa16.09■□□□□ 0.17
VARS2-212ENST00000542001 OAS1P00973 400 aaKnown RBP16.09■□□□□ 0.17
VARS2-212ENST00000542001 HAPLN1P10915 354 aaPredicted RBP16.09■□□□□ 0.17
VARS2-212ENST00000542001 CYP4B1P13584 511 aa16.09■□□□□ 0.17
VARS2-212ENST00000542001 HSPA7P48741 367 aa16.09■□□□□ 0.17
VARS2-212ENST00000542001 SLC18A1P54219 525 aa16.09■□□□□ 0.17
VARS2-212ENST00000542001 GPR107Q5VW38 600 aa16.09■□□□□ 0.17
VARS2-212ENST00000542001 CLDN19Q8N6F1 224 aa16.09■□□□□ 0.17
VARS2-212ENST00000542001 SMG8Q8ND04 991 aaKnown RBP16.09■□□□□ 0.17
VARS2-212ENST00000542001 SELENOMQ8WWX9 145 aa16.09■□□□□ 0.17
VARS2-212ENST00000542001 SLC25A51Q9H1U9 297 aa16.09■□□□□ 0.17
VARS2-212ENST00000542001 POLR3HQ9Y535 204 aaPredicted RBP16.09■□□□□ 0.17
VARS2-212ENST00000542001 ACTL7AQ9Y615 435 aa16.09■□□□□ 0.17
VARS2-212ENST00000542001 KPNA6O60684 536 aa16.09■□□□□ 0.17
VARS2-212ENST00000542001 LPOP22079 712 aaPredicted RBP16.09■□□□□ 0.17
VARS2-212ENST00000542001 SPDYE7PQ495Y7 208 aa16.09■□□□□ 0.17
VARS2-212ENST00000542001 ADCK1Q86TW2 530 aa16.09■□□□□ 0.17
VARS2-212ENST00000542001 CEP97Q8IW35 865 aa16.09■□□□□ 0.17
VARS2-212ENST00000542001 MAB21L3Q8N8X9 362 aa16.09■□□□□ 0.17
VARS2-212ENST00000542001 SIDT2Q8NBJ9 832 aaKnown RBP16.09■□□□□ 0.17
VARS2-212ENST00000542001 B4GALNT2Q8NHY0 566 aa16.09■□□□□ 0.17
VARS2-212ENST00000542001 SPPL2AQ8TCT8 520 aa16.09■□□□□ 0.17
VARS2-212ENST00000542001 RIBC2Q9H4K1 309 aa16.09■□□□□ 0.17
VARS2-212ENST00000542001 POLG2Q9UHN1 485 aa16.09■□□□□ 0.17
VARS2-212ENST00000542001 INVSQ9Y283 1065 aa16.09■□□□□ 0.17
VARS2-212ENST00000542001 ZFP37Q9Y6Q3 630 aaPredicted RBP16.09■□□□□ 0.17
VARS2-212ENST00000542001 RAD51BO15315 384 aa16.09■□□□□ 0.17
VARS2-212ENST00000542001 PRSS56P0CW18 603 aa16.09■□□□□ 0.17
VARS2-212ENST00000542001 PSMB9P28065 219 aa16.09■□□□□ 0.17
VARS2-212ENST00000542001 ETV4P43268 484 aa16.09■□□□□ 0.17
VARS2-212ENST00000542001 CRHR2Q13324 411 aa16.09■□□□□ 0.17
VARS2-212ENST00000542001 ARHGEF6Q15052 776 aa16.09■□□□□ 0.17
VARS2-212ENST00000542001 ZNF789Q5FWF6 425 aa16.09■□□□□ 0.17
VARS2-212ENST00000542001 GPRIN3Q6ZVF9 776 aa16.09■□□□□ 0.17
VARS2-212ENST00000542001 NECAB2Q7Z6G3 386 aa16.09■□□□□ 0.17
VARS2-212ENST00000542001 SYTL1Q8IYJ3 562 aa16.09■□□□□ 0.17
VARS2-212ENST00000542001 TXNDC5Q8NBS9 432 aaKnown RBP16.09■□□□□ 0.17
VARS2-212ENST00000542001 GPR156Q8NFN8 814 aa16.09■□□□□ 0.17
VARS2-212ENST00000542001 BTN2A3PQ96KV6 586 aa16.09■□□□□ 0.17
VARS2-212ENST00000542001 NMUR1Q9HB89 426 aa16.09■□□□□ 0.17
VARS2-212ENST00000542001 CAPN10Q9HC96 672 aa16.09■□□□□ 0.17
VARS2-212ENST00000542001 RAI2Q9Y5P3 530 aa16.09■□□□□ 0.17
VARS2-212ENST00000542001 KPNA3O00505 521 aaPredicted RBP16.08■□□□□ 0.17
VARS2-212ENST00000542001 SOCS7O14512 581 aa16.08■□□□□ 0.17
VARS2-212ENST00000542001 MAP3K13O43283 966 aa16.08■□□□□ 0.17
VARS2-212ENST00000542001 DUSP11O75319 330 aaKnown RBP16.08■□□□□ 0.17
VARS2-212ENST00000542001 OR6B1O95007 311 aa16.08■□□□□ 0.17
VARS2-212ENST00000542001 RTN3O95197 1032 aaPredicted RBP16.08■□□□□ 0.17
VARS2-212ENST00000542001 CORO1AP31146 461 aaKnown RBP16.08■□□□□ 0.17
VARS2-212ENST00000542001 PRIM2P49643 509 aa16.08■□□□□ 0.17
VARS2-212ENST00000542001 CCT8P50990 548 aa16.08■□□□□ 0.17
VARS2-212ENST00000542001 PRKAA2P54646 552 aa16.08■□□□□ 0.17
VARS2-212ENST00000542001 TRIM32Q13049 653 aa16.08■□□□□ 0.17
VARS2-212ENST00000542001 ANKRD23Q86SG2 305 aa16.08■□□□□ 0.17
VARS2-212ENST00000542001 KBTBD2Q8IY47 623 aa16.08■□□□□ 0.17
VARS2-212ENST00000542001 C2orf73Q8N5S3 287 aaPredicted RBP16.08■□□□□ 0.17
VARS2-212ENST00000542001 BPIFB6Q8NFQ5 453 aa16.08■□□□□ 0.17
VARS2-212ENST00000542001 LIN28AQ9H9Z2 209 aaKnown RBP16.08■□□□□ 0.17
VARS2-212ENST00000542001 DNAJB4Q9UDY4 337 aa16.08■□□□□ 0.17
VARS2-212ENST00000542001 ANAPC2Q9UJX6 822 aa16.08■□□□□ 0.17
VARS2-212ENST00000542001 SLC13A4Q9UKG4 626 aa16.08■□□□□ 0.17
VARS2-212ENST00000542001 TP73O15350 636 aa16.08■□□□□ 0.16
VARS2-212ENST00000542001 HNRNPRO43390 633 aaKnown RBP16.08■□□□□ 0.16
VARS2-212ENST00000542001 NBNO60934 754 aa16.08■□□□□ 0.16
VARS2-212ENST00000542001 GJA1P17302 382 aa16.08■□□□□ 0.16
VARS2-212ENST00000542001 UGT1A1P22309 533 aa16.08■□□□□ 0.16
VARS2-212ENST00000542001 UGT1A4P22310 534 aa16.08■□□□□ 0.16
VARS2-212ENST00000542001 UGT1A3P35503 534 aa16.08■□□□□ 0.16
VARS2-212ENST00000542001 UGT1A5P35504 534 aa16.08■□□□□ 0.16
VARS2-212ENST00000542001 AAGABQ6PD74 315 aa16.08■□□□□ 0.16
VARS2-212ENST00000542001 AGMOQ6ZNB7 445 aa16.08■□□□□ 0.16
VARS2-212ENST00000542001 WDR83Q9BRX9 315 aaKnown RBP16.08■□□□□ 0.16
VARS2-212ENST00000542001 RNF208Q9H0X6 261 aa16.08■□□□□ 0.16
VARS2-212ENST00000542001 ADAMTS10Q9H324 1103 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms