RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 OAS3Q9Y6K5 1087 aaKnown RBP10.74□□□□□ -0.69
GABRB3-204ENST00000541819 FGF1P05230 155 aa10.74□□□□□ -0.69
GABRB3-204ENST00000541819 PSMD8P48556 350 aa10.74□□□□□ -0.69
GABRB3-204ENST00000541819 CPSF6Q16630 551 aaKnown RBP eCLIP10.74□□□□□ -0.69
GABRB3-204ENST00000541819 C15orf59Q2T9L4 293 aaPredicted RBP10.74□□□□□ -0.69
GABRB3-204ENST00000541819 CCNYL2Q5T2Q4 361 aa10.74□□□□□ -0.69
GABRB3-204ENST00000541819 PLPP4Q5VZY2 271 aa10.74□□□□□ -0.69
GABRB3-204ENST00000541819 CHST4Q8NCG5 386 aa10.74□□□□□ -0.69
GABRB3-204ENST00000541819 SGCDQ92629 289 aa10.74□□□□□ -0.69
GABRB3-204ENST00000541819 AKT1S1Q96B36 256 aa10.74□□□□□ -0.69
GABRB3-204ENST00000541819 IFT46Q9NQC8 304 aa10.74□□□□□ -0.69
GABRB3-204ENST00000541819 GMIPQ9P107 970 aa10.74□□□□□ -0.69
GABRB3-204ENST00000541819 SAMD4AQ9UPU9 718 aaKnown RBP10.74□□□□□ -0.69
GABRB3-204ENST00000541819 SLC27A5Q9Y2P5 690 aa10.74□□□□□ -0.69
GABRB3-204ENST00000541819 ATG13O75143 517 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 UGT2B11O75310 529 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 SLITRK3O94933 977 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 DHFRP00374 187 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 ALPPL2P10696 532 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 TSHRP16473 764 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 IDSP22304 550 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 S100A1P23297 94 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 IL12BP29460 328 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 PRKG2Q13237 762 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 RNASE12Q5GAN4 147 aaKnown RBP10.73□□□□□ -0.69
GABRB3-204ENST00000541819 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.73□□□□□ -0.69
GABRB3-204ENST00000541819 CADM2Q8N3J6 435 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 KCTD4Q8WVF5 259 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 DNAJC18Q9H819 358 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 TBC1D24Q9ULP9 559 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 LRRC7Q96NW7 1537 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 RHPN2P1A8MT19 583 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 AZIN1O14977 448 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 C22orf31O95567 290 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 FOSL2P15408 326 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 CMPK1P30085 196 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 ARL3P36405 182 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 CEBPGP53567 150 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 ANKFN1Q8N957 763 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 RAPGEFL1Q9UHV5 662 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.73□□□□□ -0.69
GABRB3-204ENST00000541819 GLI2P10070 1586 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 RIIAD1A6NNX1 92 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 GJB6O95452 261 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 TRBC1P01850 177 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 NAGLUP54802 743 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 ELP6Q0PNE2 266 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 LIPMQ5VYY2 423 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 SCIMPQ6UWF3 145 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 SLC34A3Q8N130 599 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 PHC3Q8NDX5 983 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 ZBTB45Q96K62 511 aaPredicted RBP10.73□□□□□ -0.69
GABRB3-204ENST00000541819 CCDC115Q96NT0 180 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 RSL24D1Q9UHA3 163 aaKnown RBP10.73□□□□□ -0.69
GABRB3-204ENST00000541819 PHF24Q9UPV7 400 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 GNEQ9Y223 722 aaKnown RBP10.73□□□□□ -0.69
GABRB3-204ENST00000541819 RAP2CQ9Y3L5 183 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 CPS1P31327 1500 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 G3V2T6 193 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 ERBB2P04626 1255 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 PCCBP05166 539 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 HSD3B2P26439 372 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 SDC2P34741 201 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 CCR3P51677 355 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 ARF3P61204 181 aaPredicted RBP10.73□□□□□ -0.69
GABRB3-204ENST00000541819 CRADDP78560 199 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 ARF1P84077 181 aaKnown RBP10.73□□□□□ -0.69
GABRB3-204ENST00000541819 LAPTM5Q13571 262 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 IL18Q14116 193 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 FAM92BQ6ZTR7 304 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 OTOP1Q7RTM1 612 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 DNAAF5Q86Y56 855 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 NAT16Q8N8M0 369 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 LMLNQ96KR4 655 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 PORCNQ9H237 461 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 COPS7AQ9UBW8 275 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 MAGEL2Q9UJ55 1249 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 L1RE1Q9UN81 338 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 H3BM21 787 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 TP73O15350 636 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 TLX3O43711 291 aaPredicted RBP10.73□□□□□ -0.69
GABRB3-204ENST00000541819 CCNB2O95067 398 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 OLR1P78380 273 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 PPP3CAQ08209 521 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 TARBP2Q15633 366 aaKnown RBP10.73□□□□□ -0.69
GABRB3-204ENST00000541819 PERM1Q5SV97 790 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 CXCL17Q6UXB2 119 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 GPALPP1Q8IXQ4 340 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 EFHD2Q96C19 240 aaPredicted RBP10.73□□□□□ -0.69
GABRB3-204ENST00000541819 TCF12Q99081 682 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 KCNQ5Q9NR82 932 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 DNAJC11Q9NVH1 559 aa10.73□□□□□ -0.69
GABRB3-204ENST00000541819 WBP11Q9Y2W2 641 aaKnown RBP10.73□□□□□ -0.69
GABRB3-204ENST00000541819 SLC15A5A6NIM6 579 aa10.72□□□□□ -0.69
GABRB3-204ENST00000541819 OR6C75A6NL08 312 aa10.72□□□□□ -0.69
GABRB3-204ENST00000541819 F8VP50 259 aa10.72□□□□□ -0.69
GABRB3-204ENST00000541819 VARSP26640 1264 aaKnown RBP10.72□□□□□ -0.69
GABRB3-204ENST00000541819 GABRR2P28476 465 aa10.72□□□□□ -0.69
GABRB3-204ENST00000541819 GNALP38405 381 aa10.72□□□□□ -0.69
GABRB3-204ENST00000541819 PTPN9P43378 593 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms