RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 H0YHG0 523 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 CLIC2O15247 247 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 SPRY1O43609 319 aaPredicted RBP5.58□□□□□ -1.52
DDB1-219ENST00000541513 GMFGO60234 142 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 SURF6O75683 361 aaKnown RBP5.58□□□□□ -1.52
DDB1-219ENST00000541513 UFL1O94874 794 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 KRT6BP04259 564 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 ABHD2P08910 425 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 CCDC192P0DO97 292 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 NCF1P14598 390 aaPredicted RBP5.58□□□□□ -1.52
DDB1-219ENST00000541513 CAPN2P17655 700 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 EPORP19235 508 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 RBL1P28749 1068 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 LRPAP1P30533 357 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 PTPN7P35236 360 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 HNF1BP35680 557 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 PCP4P48539 62 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 KRT6CP48668 564 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 CLCN7P51798 805 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 MVDP53602 400 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 EGR3Q06889 387 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 IL24Q13007 206 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 DUSP8Q13202 625 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 FRG1Q14331 258 aaKnown RBP5.58□□□□□ -1.52
DDB1-219ENST00000541513 SGCBQ16585 318 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 ZSCAN26Q16670 478 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 NKPD1Q17RQ9 610 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 ZIK1Q3SY52 487 aaPredicted RBP5.58□□□□□ -1.52
DDB1-219ENST00000541513 PREPLQ4J6C6 727 aaPredicted RBP5.58□□□□□ -1.52
DDB1-219ENST00000541513 AARDQ4LEZ3 155 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 LRRC23Q53EV4 343 aaPredicted RBP5.58□□□□□ -1.52
DDB1-219ENST00000541513 MDH1BQ5I0G3 518 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 TMEM200BQ69YZ2 307 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 AFTPHQ6ULP2 937 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 LRIG3Q6UXM1 1119 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 CEP128Q6ZU80 1094 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 C1orf186Q6ZWK4 172 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 ARMCX2Q7L311 632 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 SYVN1Q86TM6 617 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 EXOC3L1Q86VI1 746 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 TIGD4Q8IY51 512 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 CCDC13Q8IYE1 715 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 CLYBLQ8N0X4 340 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 LILRA2Q8N149 483 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 ZCCHC7Q8N3Z6 543 aaKnown RBP5.58□□□□□ -1.52
DDB1-219ENST00000541513 GUF1Q8N442 669 aaKnown RBP5.58□□□□□ -1.52
DDB1-219ENST00000541513 AGBL3Q8NEM8 1001 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 DBF4BQ8NFT6 615 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 TSPAN14Q8NG11 270 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 WDR48Q8TAF3 677 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 AGR3Q8TD06 166 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 BPIFB1Q8TDL5 484 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 LRRC8CQ8TDW0 803 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 ST7LQ8TDW4 575 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 RABGGTAQ92696 567 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 THRSPQ92748 146 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 PTERQ96BW5 349 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 EDC3Q96F86 508 aaKnown RBP5.58□□□□□ -1.52
DDB1-219ENST00000541513 C5orf30Q96GV9 206 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 FBXL20Q96IG2 436 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 FAM46AQ96IP4 442 aaKnown RBP5.58□□□□□ -1.52
DDB1-219ENST00000541513 PIWIL1Q96J94 861 aaKnown RBP5.58□□□□□ -1.52
DDB1-219ENST00000541513 PIMREGQ9BSJ6 248 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 MOV10L1Q9BXT6 1211 aaKnown RBP5.58□□□□□ -1.52
DDB1-219ENST00000541513 CEP41Q9BYV8 373 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 NACAP1Q9BZK3 213 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 HRH4Q9H3N8 390 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 EHD1Q9H4M9 534 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 DCTPP1Q9H773 170 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 VCPKMTQ9H867 229 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 GPR108Q9NPR9 543 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 HOMER3Q9NSC5 361 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.58□□□□□ -1.52
DDB1-219ENST00000541513 ERAP1Q9NZ08 941 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 IMPACTQ9P2X3 320 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 CCPG1Q9ULG6 757 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 BARX2Q9UMQ3 279 aaPredicted RBP5.58□□□□□ -1.52
DDB1-219ENST00000541513 SLC45A2Q9UMX9 530 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 STX8Q9UNK0 236 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 TNFSF13BQ9Y275 285 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 WBP11Q9Y2W2 641 aaKnown RBP5.58□□□□□ -1.52
DDB1-219ENST00000541513 UBE2J1Q9Y385 318 aaPredicted RBP5.58□□□□□ -1.52
DDB1-219ENST00000541513 RAD54BQ9Y620 910 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 U3KQV3 271 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 COL4A5P29400 1685 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 MYH7P12883 1935 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 MYO5AQ9Y4I1 1855 aaKnown RBP5.58□□□□□ -1.52
DDB1-219ENST00000541513 SCN4AP35499 1836 aa5.58□□□□□ -1.52
DDB1-219ENST00000541513 WDR19Q8NEZ3 1342 aa5.57□□□□□ -1.52
DDB1-219ENST00000541513 AGAP5A6NIR3 686 aa5.57□□□□□ -1.52
DDB1-219ENST00000541513 LRRC72A6NJI9 287 aa5.57□□□□□ -1.52
DDB1-219ENST00000541513 DCLK1O15075 740 aa5.57□□□□□ -1.52
DDB1-219ENST00000541513 PPIP5K2O43314 1243 aa5.57□□□□□ -1.52
DDB1-219ENST00000541513 NUDT21O43809 227 aaKnown RBP5.57□□□□□ -1.52
DDB1-219ENST00000541513 HS6ST1O60243 411 aa5.57□□□□□ -1.52
DDB1-219ENST00000541513 ALDH1A2O94788 518 aa5.57□□□□□ -1.52
DDB1-219ENST00000541513 PRSS23O95084 383 aa5.57□□□□□ -1.52
DDB1-219ENST00000541513 AKR7A3O95154 331 aa5.57□□□□□ -1.52
DDB1-219ENST00000541513 KCNK5O95279 499 aa5.57□□□□□ -1.52
DDB1-219ENST00000541513 PRAMEF12O95522 483 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms