RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 NTRK1P04629 796 aa14.96□□□□□ -0.01
SMARCA4-207ENST00000541122 CYP2A6P11509 494 aaPredicted RBP14.96□□□□□ -0.01
SMARCA4-207ENST00000541122 FAUP35544 74 aaKnown RBP14.96□□□□□ -0.01
SMARCA4-207ENST00000541122 GUCA1AP43080 201 aaPredicted RBP14.96□□□□□ -0.01
SMARCA4-207ENST00000541122 CLCN2P51788 898 aa14.96□□□□□ -0.01
SMARCA4-207ENST00000541122 GRIK4Q16099 956 aa14.96□□□□□ -0.01
SMARCA4-207ENST00000541122 NIPAL1Q6NVV3 410 aa14.96□□□□□ -0.01
SMARCA4-207ENST00000541122 USP43Q70EL4 1123 aa14.96□□□□□ -0.01
SMARCA4-207ENST00000541122 CCDC185Q8N715 623 aa14.96□□□□□ -0.01
SMARCA4-207ENST00000541122 DNAJC1Q96KC8 554 aaKnown RBP14.96□□□□□ -0.01
SMARCA4-207ENST00000541122 FAM124BQ9H5Z6 455 aaPredicted RBP14.96□□□□□ -0.01
SMARCA4-207ENST00000541122 ENTPD4Q9Y227 616 aa14.96□□□□□ -0.01
SMARCA4-207ENST00000541122 MRPS7Q9Y2R9 242 aaKnown RBP14.96□□□□□ -0.01
SMARCA4-207ENST00000541122 POLR3HQ9Y535 204 aaPredicted RBP14.96□□□□□ -0.01
SMARCA4-207ENST00000541122 TNS2Q63HR2 1409 aa14.96□□□□□ -0.01
SMARCA4-207ENST00000541122 PRG2P13727 222 aa14.96□□□□□ -0.01
SMARCA4-207ENST00000541122 CTSKP43235 329 aa14.96□□□□□ -0.01
SMARCA4-207ENST00000541122 FKBP1AP62942 108 aaKnown RBP14.96□□□□□ -0.01
SMARCA4-207ENST00000541122 BCL2L1Q07817 233 aa14.96□□□□□ -0.01
SMARCA4-207ENST00000541122 COL9A3Q14050 684 aaPredicted RBP14.96□□□□□ -0.01
SMARCA4-207ENST00000541122 SKIV2LQ15477 1246 aaKnown RBP14.96□□□□□ -0.01
SMARCA4-207ENST00000541122 PTPRNQ16849 979 aa14.96□□□□□ -0.01
SMARCA4-207ENST00000541122 TEX47Q8TBZ9 253 aa14.96□□□□□ -0.01
SMARCA4-207ENST00000541122 RAD18Q9NS91 495 aa14.96□□□□□ -0.01
SMARCA4-207ENST00000541122 BAIAP2Q9UQB8 552 aa14.96□□□□□ -0.01
SMARCA4-207ENST00000541122 A0A1W2PRG6 482 aa14.96□□□□□ -0.02
SMARCA4-207ENST00000541122 CHST10O43529 356 aa14.96□□□□□ -0.02
SMARCA4-207ENST00000541122 TSPAN8P19075 237 aa14.96□□□□□ -0.02
SMARCA4-207ENST00000541122 RFX3P48380 749 aa14.96□□□□□ -0.02
SMARCA4-207ENST00000541122 VWA5B1Q5TIE3 1220 aa14.96□□□□□ -0.02
SMARCA4-207ENST00000541122 PLD5Q8N7P1 536 aa14.96□□□□□ -0.02
SMARCA4-207ENST00000541122 OR52K2Q8NGK3 314 aa14.96□□□□□ -0.02
SMARCA4-207ENST00000541122 IPCEF1Q8WWN9 437 aaPredicted RBP14.96□□□□□ -0.02
SMARCA4-207ENST00000541122 OSMRQ99650 979 aa14.96□□□□□ -0.02
SMARCA4-207ENST00000541122 ACO2Q99798 780 aaKnown RBP14.96□□□□□ -0.02
SMARCA4-207ENST00000541122 HIPK3Q9H422 1215 aa14.96□□□□□ -0.02
SMARCA4-207ENST00000541122 ARHGEF33A8MVX0 844 aa14.95□□□□□ -0.02
SMARCA4-207ENST00000541122 PDLIM1O00151 329 aa14.95□□□□□ -0.02
SMARCA4-207ENST00000541122 CETPP11597 493 aa14.95□□□□□ -0.02
SMARCA4-207ENST00000541122 CES1P23141 567 aa14.95□□□□□ -0.02
SMARCA4-207ENST00000541122 MAPK8P45983 427 aa14.95□□□□□ -0.02
SMARCA4-207ENST00000541122 MERTKQ12866 999 aa14.95□□□□□ -0.02
SMARCA4-207ENST00000541122 RBM20Q5T481 1227 aaKnown RBP14.95□□□□□ -0.02
SMARCA4-207ENST00000541122 ANKRD22Q5VYY1 191 aa14.95□□□□□ -0.02
SMARCA4-207ENST00000541122 ZC3H7AQ8IWR0 971 aaKnown RBP14.95□□□□□ -0.02
SMARCA4-207ENST00000541122 OR5B17Q8NGF7 314 aa14.95□□□□□ -0.02
SMARCA4-207ENST00000541122 ASB9Q96DX5 294 aa14.95□□□□□ -0.02
SMARCA4-207ENST00000541122 MARCH7Q9H992 704 aa14.95□□□□□ -0.02
SMARCA4-207ENST00000541122 EIF2B3Q9NR50 452 aaKnown RBP14.95□□□□□ -0.02
SMARCA4-207ENST00000541122 IRAK3Q9Y616 596 aa14.95□□□□□ -0.02
SMARCA4-207ENST00000541122 MST1RQ04912 1400 aa14.95□□□□□ -0.02
SMARCA4-207ENST00000541122 OR10H3O60404 316 aa14.95□□□□□ -0.02
SMARCA4-207ENST00000541122 MPP1Q00013 466 aa14.95□□□□□ -0.02
SMARCA4-207ENST00000541122 INTS6LQ5JSJ4 861 aaKnown RBP14.95□□□□□ -0.02
SMARCA4-207ENST00000541122 TMPRSS11AQ6ZMR5 421 aa14.95□□□□□ -0.02
SMARCA4-207ENST00000541122 PDSS2Q86YH6 399 aa14.95□□□□□ -0.02
SMARCA4-207ENST00000541122 CYP4X1Q8N118 509 aa14.95□□□□□ -0.02
SMARCA4-207ENST00000541122 ZNF781Q8N8C0 355 aa14.95□□□□□ -0.02
SMARCA4-207ENST00000541122 TWIST2Q8WVJ9 160 aa14.95□□□□□ -0.02
SMARCA4-207ENST00000541122 PREBQ9HCU5 417 aa14.95□□□□□ -0.02
SMARCA4-207ENST00000541122 PDP1Q9P0J1 537 aaPredicted RBP14.95□□□□□ -0.02
SMARCA4-207ENST00000541122 ST3GAL5Q9UNP4 418 aa14.95□□□□□ -0.02
SMARCA4-207ENST00000541122 MYOM1P52179 1685 aa14.95□□□□□ -0.02
SMARCA4-207ENST00000541122 FOXO6A8MYZ6 492 aa14.95□□□□□ -0.02
SMARCA4-207ENST00000541122 LRCH4O75427 683 aa14.95□□□□□ -0.02
SMARCA4-207ENST00000541122 SERPINB7O75635 380 aa14.95□□□□□ -0.02
SMARCA4-207ENST00000541122 NFICP08651 508 aa14.95□□□□□ -0.02
SMARCA4-207ENST00000541122 PTX3P26022 381 aaPredicted RBP14.95□□□□□ -0.02
SMARCA4-207ENST00000541122 PCBP1Q15365 356 aaKnown RBP eCLIP14.95□□□□□ -0.023e-16■■■□□ 16
SMARCA4-207ENST00000541122 PTPN20Q4JDL3 420 aa14.95□□□□□ -0.02
SMARCA4-207ENST00000541122 C15orf52Q6ZUT6 534 aaKnown RBP14.95□□□□□ -0.02
SMARCA4-207ENST00000541122 GATAD2AQ86YP4 633 aa14.95□□□□□ -0.02
SMARCA4-207ENST00000541122 TRIM48Q8IWZ4 208 aa14.95□□□□□ -0.02
SMARCA4-207ENST00000541122 LGI2Q8N0V4 545 aa14.95□□□□□ -0.02
SMARCA4-207ENST00000541122 SLC34A3Q8N130 599 aa14.95□□□□□ -0.02
SMARCA4-207ENST00000541122 MTFMTQ96DP5 389 aaKnown RBP14.95□□□□□ -0.02
SMARCA4-207ENST00000541122 GATA5Q9BWX5 397 aaPredicted RBP14.95□□□□□ -0.02
SMARCA4-207ENST00000541122 RACGAP1Q9H0H5 632 aa14.95□□□□□ -0.02
SMARCA4-207ENST00000541122 MED28Q9H204 178 aa14.95□□□□□ -0.02
SMARCA4-207ENST00000541122 ANKHQ9HCJ1 492 aa14.95□□□□□ -0.02
SMARCA4-207ENST00000541122 ZNF232Q9UNY5 417 aa14.95□□□□□ -0.02
SMARCA4-207ENST00000541122 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.95□□□□□ -0.02
SMARCA4-207ENST00000541122 ENDOD1O94919 500 aa14.95□□□□□ -0.02
SMARCA4-207ENST00000541122 LRG1P02750 347 aa14.95□□□□□ -0.02
SMARCA4-207ENST00000541122 TAL1P17542 331 aaPredicted RBP14.95□□□□□ -0.02
SMARCA4-207ENST00000541122 PAX3P23760 479 aa14.95□□□□□ -0.02
SMARCA4-207ENST00000541122 GALNT3Q14435 633 aa14.95□□□□□ -0.02
SMARCA4-207ENST00000541122 ZNF829Q3KNS6 432 aaPredicted RBP14.95□□□□□ -0.02
SMARCA4-207ENST00000541122 DDI2Q5TDH0 399 aa14.95□□□□□ -0.02
SMARCA4-207ENST00000541122 SMIM5Q71RC9 77 aa14.95□□□□□ -0.02
SMARCA4-207ENST00000541122 DIRAS2Q96HU8 199 aa14.95□□□□□ -0.02
SMARCA4-207ENST00000541122 TSPAN18Q96SJ8 248 aa14.95□□□□□ -0.02
SMARCA4-207ENST00000541122 C12orf65Q9H3J6 166 aaKnown RBP14.95□□□□□ -0.02
SMARCA4-207ENST00000541122 NOCTQ9UK39 431 aaKnown RBP14.95□□□□□ -0.02
SMARCA4-207ENST00000541122 NR2E1Q9Y466 385 aa14.95□□□□□ -0.02
SMARCA4-207ENST00000541122 LYVE1Q9Y5Y7 322 aa14.95□□□□□ -0.02
SMARCA4-207ENST00000541122 MDM4O15151 490 aa14.94□□□□□ -0.02
SMARCA4-207ENST00000541122 ORC5O43913 435 aa14.94□□□□□ -0.02
SMARCA4-207ENST00000541122 KHDRBS3O75525 346 aaKnown RBP14.94□□□□□ -0.02
SMARCA4-207ENST00000541122 PENKP01210 267 aaPredicted RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms