RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 USP29Q9HBJ7 922 aa14.25□□□□□ -0.13
LTBR-209ENST00000541102 PNMA8BQ9ULN7 279 aaPredicted RBP14.25□□□□□ -0.13
LTBR-209ENST00000541102 PHTF1Q9UMS5 762 aa14.25□□□□□ -0.13
LTBR-209ENST00000541102 RAI2Q9Y5P3 530 aa14.25□□□□□ -0.13
LTBR-209ENST00000541102 CSNK1G3Q9Y6M4 447 aa14.25□□□□□ -0.13
LTBR-209ENST00000541102 LRRK1Q38SD2 2015 aa14.25□□□□□ -0.13
LTBR-209ENST00000541102 FRYQ5TBA9 3013 aa14.25□□□□□ -0.13
LTBR-209ENST00000541102 CPED1A4D0V7 1026 aa14.24□□□□□ -0.13
LTBR-209ENST00000541102 GCATO75600 419 aa14.24□□□□□ -0.13
LTBR-209ENST00000541102 PGLSO95336 258 aa14.24□□□□□ -0.13
LTBR-209ENST00000541102 MMP2P08253 660 aa14.24□□□□□ -0.13
LTBR-209ENST00000541102 RBP3P10745 1247 aa14.24□□□□□ -0.13
LTBR-209ENST00000541102 CYP2A6P11509 494 aaPredicted RBP14.24□□□□□ -0.13
LTBR-209ENST00000541102 CKMT1AP12532 417 aa14.24□□□□□ -0.13
LTBR-209ENST00000541102 HTR1BP28222 390 aa14.24□□□□□ -0.13
LTBR-209ENST00000541102 VIPR1P32241 457 aa14.24□□□□□ -0.13
LTBR-209ENST00000541102 HNF1BP35680 557 aa14.24□□□□□ -0.13
LTBR-209ENST00000541102 GDF10P55107 478 aa14.24□□□□□ -0.13
LTBR-209ENST00000541102 XRCC4Q13426 336 aa14.24□□□□□ -0.13
LTBR-209ENST00000541102 NFATC4Q14934 902 aa14.24□□□□□ -0.13
LTBR-209ENST00000541102 AGERQ15109 404 aa14.24□□□□□ -0.13
LTBR-209ENST00000541102 PAPD7Q5XG87 772 aaKnown RBP14.24□□□□□ -0.13
LTBR-209ENST00000541102 DARS2Q6PI48 645 aaKnown RBP14.24□□□□□ -0.13
LTBR-209ENST00000541102 SYT10Q6XYQ8 523 aa14.24□□□□□ -0.13
LTBR-209ENST00000541102 NYAP1Q6ZVC0 841 aa14.24□□□□□ -0.13
LTBR-209ENST00000541102 PRUNE1Q86TP1 453 aa14.24□□□□□ -0.13
LTBR-209ENST00000541102 MDM1Q8TC05 714 aa14.24□□□□□ -0.13
LTBR-209ENST00000541102 NAPGQ99747 312 aaPredicted RBP14.24□□□□□ -0.13
LTBR-209ENST00000541102 LRRC61Q9BV99 259 aa14.24□□□□□ -0.13
LTBR-209ENST00000541102 POLR1EQ9GZS1 481 aaKnown RBP14.24□□□□□ -0.13
LTBR-209ENST00000541102 CCDC86Q9H6F5 360 aaKnown RBP14.24□□□□□ -0.13
LTBR-209ENST00000541102 HACD1B0YJ81 288 aa14.23□□□□□ -0.13
LTBR-209ENST00000541102 CACNB4O00305 520 aaPredicted RBP14.23□□□□□ -0.13
LTBR-209ENST00000541102 YY2O15391 372 aa14.23□□□□□ -0.13
LTBR-209ENST00000541102 LIASO43766 372 aa14.23□□□□□ -0.13
LTBR-209ENST00000541102 RASGRP1O95267 797 aa14.23□□□□□ -0.13
LTBR-209ENST00000541102 ANXA6P08133 673 aa14.23□□□□□ -0.13
LTBR-209ENST00000541102 PDHA1P08559 390 aa14.23□□□□□ -0.13
LTBR-209ENST00000541102 CTSEP14091 401 aa14.23□□□□□ -0.13
LTBR-209ENST00000541102 TSHRP16473 764 aa14.23□□□□□ -0.13
LTBR-209ENST00000541102 GM2AP17900 193 aa14.23□□□□□ -0.13
LTBR-209ENST00000541102 NFKBIAP25963 317 aa14.23□□□□□ -0.13
LTBR-209ENST00000541102 BLKP51451 505 aa14.23□□□□□ -0.13
LTBR-209ENST00000541102 DUSP3P51452 185 aaPredicted RBP14.23□□□□□ -0.13
LTBR-209ENST00000541102 E2F1Q01094 437 aa14.23□□□□□ -0.13
LTBR-209ENST00000541102 TARDBPQ13148 414 aaKnown RBP eCLIP14.23□□□□□ -0.13
LTBR-209ENST00000541102 MTM1Q13496 603 aa14.23□□□□□ -0.13
LTBR-209ENST00000541102 CNGA3Q16281 694 aa14.23□□□□□ -0.13
LTBR-209ENST00000541102 CDKN3Q16667 212 aa14.23□□□□□ -0.13
LTBR-209ENST00000541102 LONRF2Q1L5Z9 754 aa14.23□□□□□ -0.13
LTBR-209ENST00000541102 ALG11Q2TAA5 492 aa14.23□□□□□ -0.13
LTBR-209ENST00000541102 ALG1LQ6GMV1 187 aa14.23□□□□□ -0.13
LTBR-209ENST00000541102 ZCCHC8Q6NZY4 707 aaKnown RBP14.23□□□□□ -0.13
LTBR-209ENST00000541102 BZW1Q7L1Q6 419 aaKnown RBP14.23□□□□□ -0.13
LTBR-209ENST00000541102 ZNF567Q8N184 647 aa14.23□□□□□ -0.13
LTBR-209ENST00000541102 PRELID2Q8N945 189 aa14.23□□□□□ -0.13
LTBR-209ENST00000541102 HTR3CQ8WXA8 447 aa14.23□□□□□ -0.13
LTBR-209ENST00000541102 PBKQ96KB5 322 aa14.23□□□□□ -0.13
LTBR-209ENST00000541102 C16orf45Q96MC5 204 aaPredicted RBP14.23□□□□□ -0.13
LTBR-209ENST00000541102 WDR92Q96MX6 357 aa14.23□□□□□ -0.13
LTBR-209ENST00000541102 SMIM14Q96QK8 99 aa14.23□□□□□ -0.13
LTBR-209ENST00000541102 GORASP1Q9BQQ3 440 aa14.23□□□□□ -0.13
LTBR-209ENST00000541102 TMEM121Q9BTD3 319 aa14.23□□□□□ -0.13
LTBR-209ENST00000541102 BRD8Q9H0E9 1235 aa14.23□□□□□ -0.13
LTBR-209ENST00000541102 EVA1BQ9NVM1 165 aa14.23□□□□□ -0.13
LTBR-209ENST00000541102 KLQ9UEF7 1012 aa14.23□□□□□ -0.13
LTBR-209ENST00000541102 DOLKQ9UPQ8 538 aa14.23□□□□□ -0.13
LTBR-209ENST00000541102 KMT2BQ9UMN6 2715 aaPredicted RBP14.22□□□□□ -0.13
LTBR-209ENST00000541102 LY6G6EA0A0G2JKS1 128 aa14.22□□□□□ -0.13
LTBR-209ENST00000541102 A0A0U1RQS6 177 aa14.22□□□□□ -0.13
LTBR-209ENST00000541102 GOLGA6CA6NDK9 693 aa14.22□□□□□ -0.13
LTBR-209ENST00000541102 GOLGA6BA6NDN3 693 aa14.22□□□□□ -0.13
LTBR-209ENST00000541102 NPIPB15A6NHN6 443 aaPredicted RBP14.22□□□□□ -0.13
LTBR-209ENST00000541102 SRRM3A6NNA2 597 aaPredicted RBP14.22□□□□□ -0.13
LTBR-209ENST00000541102 TAF4O00268 1085 aa14.22□□□□□ -0.13
LTBR-209ENST00000541102 KCNN4O15554 427 aa14.22□□□□□ -0.13
LTBR-209ENST00000541102 HEXIM1O94992 359 aaKnown RBP14.22□□□□□ -0.13
LTBR-209ENST00000541102 TNFP01375 233 aa14.22□□□□□ -0.13
LTBR-209ENST00000541102 CELA2BP08218 269 aaPredicted RBP14.22□□□□□ -0.13
LTBR-209ENST00000541102 ALPIP09923 528 aa14.22□□□□□ -0.13
LTBR-209ENST00000541102 GOLGA6DP0CG33 693 aa14.22□□□□□ -0.13
LTBR-209ENST00000541102 CES1P23141 567 aa14.22□□□□□ -0.13
LTBR-209ENST00000541102 ETV3P41162 512 aa14.22□□□□□ -0.13
LTBR-209ENST00000541102 HK3P52790 923 aa14.22□□□□□ -0.13
LTBR-209ENST00000541102 EPHB1P54762 984 aa14.22□□□□□ -0.13
LTBR-209ENST00000541102 SRP54P61011 504 aaKnown RBP14.22□□□□□ -0.13
LTBR-209ENST00000541102 ETF1P62495 437 aaKnown RBP14.22□□□□□ -0.13
LTBR-209ENST00000541102 INSM1Q01101 510 aaPredicted RBP14.22□□□□□ -0.13
LTBR-209ENST00000541102 CYP4F3Q08477 520 aa14.22□□□□□ -0.13
LTBR-209ENST00000541102 CAMK2BQ13554 666 aa14.22□□□□□ -0.13
LTBR-209ENST00000541102 ARHGEF7Q14155 803 aa14.22□□□□□ -0.13
LTBR-209ENST00000541102 OASLQ15646 514 aaKnown RBP14.22□□□□□ -0.13
LTBR-209ENST00000541102 TEX44Q53QW1 395 aa14.22□□□□□ -0.13
LTBR-209ENST00000541102 PNCKQ6P2M8 343 aa14.22□□□□□ -0.13
LTBR-209ENST00000541102 USP45Q70EL2 814 aa14.22□□□□□ -0.13
LTBR-209ENST00000541102 HSD11B1LQ7Z5J1 315 aa14.22□□□□□ -0.13
LTBR-209ENST00000541102 TSPAN33Q86UF1 283 aa14.22□□□□□ -0.13
LTBR-209ENST00000541102 CDKL3Q8IVW4 592 aaPredicted RBP14.22□□□□□ -0.13
LTBR-209ENST00000541102 NDUFAF2Q8N183 169 aa14.22□□□□□ -0.13
LTBR-209ENST00000541102 PELI3Q8N2H9 469 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms