RNA–Protein interactions for RNA: ENST00000540990.5

CACNB3-203, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2 BASIC

Gene CACNB3, Length 1,814 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-203ENST00000540990 DHFR2Q86XF0 187 aa16.8■□□□□ 0.28
CACNB3-203ENST00000540990 SCN4BQ8IWT1 228 aa16.8■□□□□ 0.28
CACNB3-203ENST00000540990 OR9I1Q8NGQ6 314 aa16.8■□□□□ 0.28
CACNB3-203ENST00000540990 BRSK1Q8TDC3 778 aa16.8■□□□□ 0.28
CACNB3-203ENST00000540990 IGSF8Q969P0 613 aa16.8■□□□□ 0.28
CACNB3-203ENST00000540990 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.8■□□□□ 0.28
CACNB3-203ENST00000540990 PABPC5Q96DU9 382 aaKnown RBP16.8■□□□□ 0.28
CACNB3-203ENST00000540990 TBATAQ96M53 351 aa16.8■□□□□ 0.28
CACNB3-203ENST00000540990 ZNF599Q96NL3 588 aa16.8■□□□□ 0.28
CACNB3-203ENST00000540990 PRPF18Q99633 342 aaKnown RBP16.8■□□□□ 0.28
CACNB3-203ENST00000540990 AARSD1Q9BTE6 412 aaKnown RBP16.8■□□□□ 0.28
CACNB3-203ENST00000540990 SLC52A3Q9NQ40 469 aa16.8■□□□□ 0.28
CACNB3-203ENST00000540990 OLA1Q9NTK5 396 aaKnown RBP16.8■□□□□ 0.28
CACNB3-203ENST00000540990 CCM2LQ9NUG4 571 aaPredicted RBP16.8■□□□□ 0.28
CACNB3-203ENST00000540990 MAP10Q9P2G4 905 aa16.8■□□□□ 0.28
CACNB3-203ENST00000540990 APPL1Q9UKG1 709 aa16.8■□□□□ 0.28
CACNB3-203ENST00000540990 KCTD3Q9Y597 815 aa16.8■□□□□ 0.28
CACNB3-203ENST00000540990 TANC1Q9C0D5 1861 aa16.79■□□□□ 0.28
CACNB3-203ENST00000540990 OR51F1A6NGY5 319 aa16.79■□□□□ 0.28
CACNB3-203ENST00000540990 AZIN1O14977 448 aa16.79■□□□□ 0.28
CACNB3-203ENST00000540990 CD3EAPO15446 510 aaKnown RBP16.79■□□□□ 0.28
CACNB3-203ENST00000540990 PRAMEF11O60813 436 aa16.79■□□□□ 0.28
CACNB3-203ENST00000540990 VPS4BO75351 444 aa16.79■□□□□ 0.28
CACNB3-203ENST00000540990 GOT2P00505 430 aaKnown RBP16.79■□□□□ 0.28
CACNB3-203ENST00000540990 ALDH3B2P48448 385 aa16.79■□□□□ 0.28
CACNB3-203ENST00000540990 SLC7A2P52569 658 aa16.79■□□□□ 0.28
CACNB3-203ENST00000540990 BNIP2Q12982 314 aa16.79■□□□□ 0.28
CACNB3-203ENST00000540990 GRIK2Q13002 908 aa16.79■□□□□ 0.28
CACNB3-203ENST00000540990 MTA1Q13330 715 aa16.79■□□□□ 0.28
CACNB3-203ENST00000540990 OGFOD2Q6N063 350 aa16.79■□□□□ 0.28
CACNB3-203ENST00000540990 RAB44Q7Z6P3 723 aaPredicted RBP16.79■□□□□ 0.28
CACNB3-203ENST00000540990 LDB1Q86U70 411 aaPredicted RBP16.79■□□□□ 0.28
CACNB3-203ENST00000540990 PTGR2Q8N8N7 351 aaPredicted RBP16.79■□□□□ 0.28
CACNB3-203ENST00000540990 MFSD2AQ8NA29 543 aa16.79■□□□□ 0.28
CACNB3-203ENST00000540990 ZFP28Q8NHY6 868 aa16.79■□□□□ 0.28
CACNB3-203ENST00000540990 HAUS8Q9BT25 410 aa16.79■□□□□ 0.28
CACNB3-203ENST00000540990 ANKRD60Q9BZ19 345 aa16.79■□□□□ 0.28
CACNB3-203ENST00000540990 POLR1EQ9GZS1 481 aaKnown RBP16.79■□□□□ 0.28
CACNB3-203ENST00000540990 FBRSL1Q9HCM7 1045 aaKnown RBP16.79■□□□□ 0.28
CACNB3-203ENST00000540990 SDR39U1Q9NRG7 319 aaPredicted RBP16.79■□□□□ 0.28
CACNB3-203ENST00000540990 INTS10Q9NVR2 710 aaKnown RBP16.79■□□□□ 0.28
CACNB3-203ENST00000540990 ETAA1Q9NY74 926 aa16.79■□□□□ 0.28
CACNB3-203ENST00000540990 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.79■□□□□ 0.28
CACNB3-203ENST00000540990 GMIPQ9P107 970 aa16.79■□□□□ 0.28
CACNB3-203ENST00000540990 A0A0J9YYE9 177 aa16.78■□□□□ 0.28
CACNB3-203ENST00000540990 ARHGAP10A1A4S6 786 aa16.78■□□□□ 0.28
CACNB3-203ENST00000540990 FXYD1O00168 92 aa16.78■□□□□ 0.28
CACNB3-203ENST00000540990 RAMP2O60895 175 aa16.78■□□□□ 0.28
CACNB3-203ENST00000540990 CELF2O95319 508 aaKnown RBP16.78■□□□□ 0.28
CACNB3-203ENST00000540990 ZNF23P17027 643 aa16.78■□□□□ 0.28
CACNB3-203ENST00000540990 ATP6V0D1P61421 351 aa16.78■□□□□ 0.28
CACNB3-203ENST00000540990 OR4D1Q15615 310 aa16.78■□□□□ 0.28
CACNB3-203ENST00000540990 TRIM71Q2Q1W2 868 aaKnown RBP16.78■□□□□ 0.28
CACNB3-203ENST00000540990 C5orf22Q49AR2 442 aa16.78■□□□□ 0.28
CACNB3-203ENST00000540990 TMEM259Q4ZIN3 620 aa16.78■□□□□ 0.28
CACNB3-203ENST00000540990 LCN8Q6JVE9 175 aa16.78■□□□□ 0.28
CACNB3-203ENST00000540990 IYDQ6PHW0 289 aa16.78■□□□□ 0.28
CACNB3-203ENST00000540990 TWIST2Q8WVJ9 160 aa16.78■□□□□ 0.28
CACNB3-203ENST00000540990 TRIB3Q96RU7 358 aa16.78■□□□□ 0.28
CACNB3-203ENST00000540990 C1QTNF3Q9BXJ4 246 aa16.78■□□□□ 0.28
CACNB3-203ENST00000540990 PDFQ9HBH1 243 aa16.78■□□□□ 0.28
CACNB3-203ENST00000540990 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.78■□□□□ 0.28
CACNB3-203ENST00000540990 ABI2Q9NYB9 513 aaPredicted RBP16.78■□□□□ 0.28
CACNB3-203ENST00000540990 MRPL42Q9Y6G3 142 aaKnown RBP16.78■□□□□ 0.28
CACNB3-203ENST00000540990 CCDC162PA2VCL2 907 aa16.77■□□□□ 0.28
CACNB3-203ENST00000540990 MANSC4A6NHS7 340 aaPredicted RBP16.77■□□□□ 0.28
CACNB3-203ENST00000540990 TRIM64CA6NLI5 447 aa16.77■□□□□ 0.28
CACNB3-203ENST00000540990 CCL22O00626 93 aa16.77■□□□□ 0.28
CACNB3-203ENST00000540990 NME4O00746 187 aa16.77■□□□□ 0.28
CACNB3-203ENST00000540990 B4GALT3O60512 393 aa16.77■□□□□ 0.28
CACNB3-203ENST00000540990 KERAO60938 352 aa16.77■□□□□ 0.28
CACNB3-203ENST00000540990 H6PDO95479 791 aa16.77■□□□□ 0.28
CACNB3-203ENST00000540990 STAMBPO95630 424 aa16.77■□□□□ 0.28
CACNB3-203ENST00000540990 ASLP04424 464 aa16.77■□□□□ 0.28
CACNB3-203ENST00000540990 PRR35P0CG20 571 aa16.77■□□□□ 0.28
CACNB3-203ENST00000540990 ATP6V1B2P21281 511 aa16.77■□□□□ 0.28
CACNB3-203ENST00000540990 STC1P52823 247 aa16.77■□□□□ 0.28
CACNB3-203ENST00000540990 TUBA4AP68366 448 aa16.77■□□□□ 0.28
CACNB3-203ENST00000540990 RING1Q06587 406 aa16.77■□□□□ 0.28
CACNB3-203ENST00000540990 SEMA3AQ14563 771 aa16.77■□□□□ 0.28
CACNB3-203ENST00000540990 POLD3Q15054 466 aaPredicted RBP16.77■□□□□ 0.28
CACNB3-203ENST00000540990 MTX3Q5HYI7 312 aa16.77■□□□□ 0.28
CACNB3-203ENST00000540990 NHSL2Q5HYW2 709 aa16.77■□□□□ 0.28
CACNB3-203ENST00000540990 INTS11Q5TA45 600 aaKnown RBP16.77■□□□□ 0.28
CACNB3-203ENST00000540990 MIER2Q8N344 545 aa16.77■□□□□ 0.28
CACNB3-203ENST00000540990 PNPLA1Q8N8W4 532 aa16.77■□□□□ 0.28
CACNB3-203ENST00000540990 HM13Q8TCT9 377 aa16.77■□□□□ 0.28
CACNB3-203ENST00000540990 KIAA1191Q96A73 305 aa16.77■□□□□ 0.28
CACNB3-203ENST00000540990 NMD3Q96D46 503 aaKnown RBP16.77■□□□□ 0.28
CACNB3-203ENST00000540990 DNAJC1Q96KC8 554 aaKnown RBP16.77■□□□□ 0.28
CACNB3-203ENST00000540990 SLC29A1Q99808 456 aa16.77■□□□□ 0.28
CACNB3-203ENST00000540990 SEMA3CQ99985 751 aa16.77■□□□□ 0.28
CACNB3-203ENST00000540990 TRIM15Q9C019 465 aa16.77■□□□□ 0.28
CACNB3-203ENST00000540990 GRIP2Q9C0E4 1043 aa16.77■□□□□ 0.28
CACNB3-203ENST00000540990 DERL2Q9GZP9 239 aa16.77■□□□□ 0.28
CACNB3-203ENST00000540990 MUC13Q9H3R2 512 aa16.77■□□□□ 0.28
CACNB3-203ENST00000540990 RETREG1Q9H6L5 497 aa16.77■□□□□ 0.28
CACNB3-203ENST00000540990 PNPLA3Q9NST1 481 aa16.77■□□□□ 0.28
CACNB3-203ENST00000540990 DUS2Q9NX74 493 aaKnown RBP16.77■□□□□ 0.28
CACNB3-203ENST00000540990 THEGQ9P2T0 379 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms