RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 HTRA2O43464 458 aaPredicted RBP26.76■■□□□ 1.87
CHFR-218ENST00000540963 SCNN1BP51168 640 aa26.76■■□□□ 1.87
CHFR-218ENST00000540963 CDK3Q00526 305 aa26.76■■□□□ 1.87
CHFR-218ENST00000540963 TMEM71Q6P5X7 295 aa26.76■■□□□ 1.87
CHFR-218ENST00000540963 CLEC18BQ6UXF7 455 aa26.76■■□□□ 1.87
CHFR-218ENST00000540963 CLEC18CQ8NCF0 446 aa26.76■■□□□ 1.87
CHFR-218ENST00000540963 PMEPA1Q969W9 287 aa26.76■■□□□ 1.87
CHFR-218ENST00000540963 DTD2Q96FN9 168 aa26.76■■□□□ 1.87
CHFR-218ENST00000540963 EFHD1Q9BUP0 239 aa26.76■■□□□ 1.87
CHFR-218ENST00000540963 AP4E1Q9UPM8 1137 aa26.76■■□□□ 1.87
CHFR-218ENST00000540963 A8MX80 341 aa26.75■■□□□ 1.87
CHFR-218ENST00000540963 EEF2KO00418 725 aaKnown RBP26.75■■□□□ 1.87
CHFR-218ENST00000540963 PPM1DO15297 605 aa26.75■■□□□ 1.87
CHFR-218ENST00000540963 RAD1O60671 282 aa26.75■■□□□ 1.87
CHFR-218ENST00000540963 HEXIM1O94992 359 aaKnown RBP26.75■■□□□ 1.87
CHFR-218ENST00000540963 GP1BBP13224 206 aa26.75■■□□□ 1.87
CHFR-218ENST00000540963 AK4P27144 223 aaPredicted RBP26.75■■□□□ 1.87
CHFR-218ENST00000540963 VIPR1P32241 457 aa26.75■■□□□ 1.87
CHFR-218ENST00000540963 GNPDA1P46926 289 aa26.75■■□□□ 1.87
CHFR-218ENST00000540963 CTBSQ01459 385 aa26.75■■□□□ 1.87
CHFR-218ENST00000540963 CNGA3Q16281 694 aa26.75■■□□□ 1.87
CHFR-218ENST00000540963 TMCO4Q5TGY1 634 aa26.75■■□□□ 1.87
CHFR-218ENST00000540963 DCUN1D2Q6PH85 259 aa26.75■■□□□ 1.87
CHFR-218ENST00000540963 SLC30A9Q6PML9 568 aa26.75■■□□□ 1.87
CHFR-218ENST00000540963 ARHGAP12Q8IWW6 846 aa26.75■■□□□ 1.87
CHFR-218ENST00000540963 SCARF2Q96GP6 870 aaPredicted RBP26.75■■□□□ 1.87
CHFR-218ENST00000540963 ZNF599Q96NL3 588 aa26.75■■□□□ 1.87
CHFR-218ENST00000540963 PILRAQ9UKJ1 303 aa26.75■■□□□ 1.87
CHFR-218ENST00000540963 NBASA2RRP1 2371 aa26.74■■□□□ 1.87
CHFR-218ENST00000540963 EPHB6O15197 1021 aa26.74■■□□□ 1.87
CHFR-218ENST00000540963 TPM2P07951 284 aa26.74■■□□□ 1.87
CHFR-218ENST00000540963 CSF2RBP32927 897 aa26.74■■□□□ 1.87
CHFR-218ENST00000540963 HSPA9P38646 679 aaKnown RBP26.74■■□□□ 1.87
CHFR-218ENST00000540963 ADCY8P40145 1251 aa26.74■■□□□ 1.87
CHFR-218ENST00000540963 KLK7P49862 253 aa26.74■■□□□ 1.87
CHFR-218ENST00000540963 ZNF135P52742 658 aaPredicted RBP26.74■■□□□ 1.87
CHFR-218ENST00000540963 SKIDA1Q1XH10 827 aa26.74■■□□□ 1.87
CHFR-218ENST00000540963 FKBP15Q5T1M5 1219 aa26.74■■□□□ 1.87
CHFR-218ENST00000540963 KCNK4Q9NYG8 393 aa26.74■■□□□ 1.87
CHFR-218ENST00000540963 ST14Q9Y5Y6 855 aa26.74■■□□□ 1.87
CHFR-218ENST00000540963 MAP4P27816 1152 aaKnown RBP26.73■■□□□ 1.87
CHFR-218ENST00000540963 MAN1A1P33908 653 aa26.73■■□□□ 1.87
CHFR-218ENST00000540963 FASLGP48023 281 aa26.73■■□□□ 1.87
CHFR-218ENST00000540963 DPTQ07507 201 aa26.73■■□□□ 1.87
CHFR-218ENST00000540963 ERMARDQ5T6L9 678 aa26.73■■□□□ 1.87
CHFR-218ENST00000540963 NKAIN2Q5VXU1 208 aa26.73■■□□□ 1.87
CHFR-218ENST00000540963 RFX8Q6ZV50 586 aa26.73■■□□□ 1.87
CHFR-218ENST00000540963 BMPERQ8N8U9 685 aa26.73■■□□□ 1.87
CHFR-218ENST00000540963 C9orf43Q8TAL5 461 aaPredicted RBP26.73■■□□□ 1.87
CHFR-218ENST00000540963 PATE1Q8WXA2 126 aa26.73■■□□□ 1.87
CHFR-218ENST00000540963 KIAA1143Q96AT1 154 aaPredicted RBP26.73■■□□□ 1.87
CHFR-218ENST00000540963 NSMCE3Q96MG7 304 aa26.73■■□□□ 1.87
CHFR-218ENST00000540963 ZPBPQ9BS86 351 aa26.73■■□□□ 1.87
CHFR-218ENST00000540963 SPRY4Q9C004 299 aa26.73■■□□□ 1.87
CHFR-218ENST00000540963 NUP62CLQ9H1M0 184 aa26.73■■□□□ 1.87
CHFR-218ENST00000540963 DHX35Q9H5Z1 703 aaKnown RBP26.73■■□□□ 1.87
CHFR-218ENST00000540963 PHTF1Q9UMS5 762 aa26.73■■□□□ 1.87
CHFR-218ENST00000540963 SIK3Q9Y2K2 1263 aa26.73■■□□□ 1.87
CHFR-218ENST00000540963 RELNP78509 3460 aa26.73■■□□□ 1.87
CHFR-218ENST00000540963 DAPK3O43293 454 aa26.72■■□□□ 1.87
CHFR-218ENST00000540963 CYP2A6P11509 494 aaPredicted RBP26.72■■□□□ 1.87
CHFR-218ENST00000540963 ERCC2P18074 760 aa26.72■■□□□ 1.87
CHFR-218ENST00000540963 LBRQ14739 615 aaKnown RBP26.72■■□□□ 1.87
CHFR-218ENST00000540963 CRTC2Q53ET0 693 aaPredicted RBP26.72■■□□□ 1.87
CHFR-218ENST00000540963 PSTKQ8IV42 348 aaKnown RBP26.72■■□□□ 1.87
CHFR-218ENST00000540963 NLGN4XQ8N0W4 816 aa26.72■■□□□ 1.87
CHFR-218ENST00000540963 LZTR1Q8N653 840 aa26.72■■□□□ 1.87
CHFR-218ENST00000540963 NLGN4YQ8NFZ3 816 aaPredicted RBP26.72■■□□□ 1.87
CHFR-218ENST00000540963 SUDS3Q9H7L9 328 aaPredicted RBP26.72■■□□□ 1.87
CHFR-218ENST00000540963 SEPT11Q9NVA2 429 aaKnown RBP26.72■■□□□ 1.87
CHFR-218ENST00000540963 OCIAD1Q9NX40 245 aa26.72■■□□□ 1.87
CHFR-218ENST00000540963 DFFAO00273 331 aa26.71■■□□□ 1.87
CHFR-218ENST00000540963 CR2P20023 1033 aa26.71■■□□□ 1.87
CHFR-218ENST00000540963 HCAR3P49019 387 aa26.71■■□□□ 1.87
CHFR-218ENST00000540963 OGDHQ02218 1023 aa26.71■■□□□ 1.87
CHFR-218ENST00000540963 PPP1R2P3Q6NXS1 205 aa26.71■■□□□ 1.87
CHFR-218ENST00000540963 FAM129CQ86XR2 697 aa26.71■■□□□ 1.87
CHFR-218ENST00000540963 LURAP1LQ8IV03 231 aa26.71■■□□□ 1.87
CHFR-218ENST00000540963 MCOLN2Q8IZK6 566 aa26.71■■□□□ 1.87
CHFR-218ENST00000540963 ENOX1Q8TC92 643 aaKnown RBP26.71■■□□□ 1.87
CHFR-218ENST00000540963 AGPAT1Q99943 283 aa26.71■■□□□ 1.87
CHFR-218ENST00000540963 GPN2Q9H9Y4 310 aaPredicted RBP26.71■■□□□ 1.87
CHFR-218ENST00000540963 GPATCH2LQ9NWQ4 482 aa26.71■■□□□ 1.87
CHFR-218ENST00000540963 EFCAB7A8K855 629 aa26.7■■□□□ 1.86
CHFR-218ENST00000540963 CPP00450 1065 aa26.7■■□□□ 1.86
CHFR-218ENST00000540963 ETV3P41162 512 aa26.7■■□□□ 1.86
CHFR-218ENST00000540963 ACTR1BP42025 376 aa26.7■■□□□ 1.86
CHFR-218ENST00000540963 ACTR1AP61163 376 aa26.7■■□□□ 1.86
CHFR-218ENST00000540963 MC1RQ01726 317 aa26.7■■□□□ 1.86
CHFR-218ENST00000540963 LRP8Q14114 963 aa26.7■■□□□ 1.86
CHFR-218ENST00000540963 KRT31Q15323 416 aa26.7■■□□□ 1.86
CHFR-218ENST00000540963 RALGPS1Q5JS13 557 aa26.7■■□□□ 1.86
CHFR-218ENST00000540963 CDKAL1Q5VV42 579 aa26.7■■□□□ 1.86
CHFR-218ENST00000540963 ANKS6Q68DC2 871 aa26.7■■□□□ 1.86
CHFR-218ENST00000540963 RAET1GQ6H3X3 334 aa26.7■■□□□ 1.86
CHFR-218ENST00000540963 ACAD10Q6JQN1 1059 aa26.7■■□□□ 1.86
CHFR-218ENST00000540963 WDR74Q6RFH5 385 aaPredicted RBP26.7■■□□□ 1.86
CHFR-218ENST00000540963 ARHGAP36Q6ZRI8 547 aa26.7■■□□□ 1.86
CHFR-218ENST00000540963 HSD11B1LQ7Z5J1 315 aa26.7■■□□□ 1.86
CHFR-218ENST00000540963 NPWQ8N729 165 aa26.7■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms