RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 GPR1P46091 355 aa10.38□□□□□ -0.75
CDCA3-208ENST00000540683 ARSEP51690 589 aa10.38□□□□□ -0.75
CDCA3-208ENST00000540683 PPIDQ08752 370 aaKnown RBP10.38□□□□□ -0.75
CDCA3-208ENST00000540683 C1orf61Q13536 156 aa10.38□□□□□ -0.75
CDCA3-208ENST00000540683 CNGA3Q16281 694 aa10.38□□□□□ -0.75
CDCA3-208ENST00000540683 ZDHHC20Q5W0Z9 365 aa10.38□□□□□ -0.75
CDCA3-208ENST00000540683 GUSBP11Q6P575 273 aa10.38□□□□□ -0.75
CDCA3-208ENST00000540683 SARM1Q6SZW1 724 aa10.38□□□□□ -0.75
CDCA3-208ENST00000540683 ADAMTSL4Q6UY14 1074 aa10.38□□□□□ -0.75
CDCA3-208ENST00000540683 ZSWIM9Q86XI8 627 aa10.38□□□□□ -0.75
CDCA3-208ENST00000540683 SLC35F3Q8IY50 421 aa10.38□□□□□ -0.75
CDCA3-208ENST00000540683 NETO2Q8NC67 525 aa10.38□□□□□ -0.75
CDCA3-208ENST00000540683 LSM14AQ8ND56 463 aaKnown RBP10.38□□□□□ -0.75
CDCA3-208ENST00000540683 EXD1Q8NHP7 514 aa10.38□□□□□ -0.75
CDCA3-208ENST00000540683 FUBP1Q96AE4 644 aaKnown RBP10.38□□□□□ -0.75
CDCA3-208ENST00000540683 BTBD6Q96KE9 485 aa10.38□□□□□ -0.75
CDCA3-208ENST00000540683 DCBLD2Q96PD2 775 aa10.38□□□□□ -0.75
CDCA3-208ENST00000540683 RNF157Q96PX1 679 aa10.38□□□□□ -0.75
CDCA3-208ENST00000540683 LGMNQ99538 433 aa10.38□□□□□ -0.75
CDCA3-208ENST00000540683 CCDC3Q9BQI4 270 aa10.38□□□□□ -0.75
CDCA3-208ENST00000540683 TRIM5Q9C035 493 aa10.38□□□□□ -0.75
CDCA3-208ENST00000540683 DPEP2Q9H4A9 486 aa10.38□□□□□ -0.75
CDCA3-208ENST00000540683 CYP4F12Q9HCS2 524 aa10.38□□□□□ -0.75
CDCA3-208ENST00000540683 ETNK2Q9NVF9 386 aa10.38□□□□□ -0.75
CDCA3-208ENST00000540683 MOSPD1Q9UJG1 213 aa10.38□□□□□ -0.75
CDCA3-208ENST00000540683 APPL1Q9UKG1 709 aa10.38□□□□□ -0.75
CDCA3-208ENST00000540683 NENFQ9UMX5 172 aa10.38□□□□□ -0.75
CDCA3-208ENST00000540683 SPEGQ15772 3267 aa10.37□□□□□ -0.75
CDCA3-208ENST00000540683 ITIH2P19823 946 aa10.37□□□□□ -0.75
CDCA3-208ENST00000540683 NOP2P46087 812 aaKnown RBP10.37□□□□□ -0.75
CDCA3-208ENST00000540683 GPR3P46089 330 aa10.37□□□□□ -0.75
CDCA3-208ENST00000540683 MAXP61244 160 aa10.37□□□□□ -0.75
CDCA3-208ENST00000540683 IFI35P80217 286 aaPredicted RBP10.37□□□□□ -0.75
CDCA3-208ENST00000540683 CDK3Q00526 305 aa10.37□□□□□ -0.75
CDCA3-208ENST00000540683 AP1B1Q10567 949 aa10.37□□□□□ -0.75
CDCA3-208ENST00000540683 ASTE1Q2TB18 679 aaPredicted RBP10.37□□□□□ -0.75
CDCA3-208ENST00000540683 LRRK1Q38SD2 2015 aa10.37□□□□□ -0.75
CDCA3-208ENST00000540683 C14orf28Q4W4Y0 310 aa10.37□□□□□ -0.75
CDCA3-208ENST00000540683 TMEM164Q5U3C3 297 aa10.37□□□□□ -0.75
CDCA3-208ENST00000540683 DENND2CQ68D51 928 aa10.37□□□□□ -0.75
CDCA3-208ENST00000540683 PDPK2PQ6A1A2 396 aa10.37□□□□□ -0.75
CDCA3-208ENST00000540683 OGFOD3Q6PK18 319 aa10.37□□□□□ -0.75
CDCA3-208ENST00000540683 HEATR4Q86WZ0 1026 aa10.37□□□□□ -0.75
CDCA3-208ENST00000540683 WDFY3Q8IZQ1 3526 aa10.37□□□□□ -0.75
CDCA3-208ENST00000540683 CCDC112Q8NEF3 446 aa10.37□□□□□ -0.75
CDCA3-208ENST00000540683 HNRNPLLQ8WVV9 542 aaKnown RBP10.37□□□□□ -0.75
CDCA3-208ENST00000540683 PIH1D2Q8WWB5 315 aa10.37□□□□□ -0.75
CDCA3-208ENST00000540683 AP2M1Q96CW1 435 aa10.37□□□□□ -0.75
CDCA3-208ENST00000540683 LIN37Q96GY3 246 aaPredicted RBP10.37□□□□□ -0.75
CDCA3-208ENST00000540683 HIC2Q96JB3 615 aa10.37□□□□□ -0.75
CDCA3-208ENST00000540683 PPP1R2P1Q96PQ5 205 aa10.37□□□□□ -0.75
CDCA3-208ENST00000540683 UBL7Q96S82 380 aaPredicted RBP10.37□□□□□ -0.75
CDCA3-208ENST00000540683 LYSMD1Q96S90 227 aa10.37□□□□□ -0.75
CDCA3-208ENST00000540683 VAT1Q99536 393 aa10.37□□□□□ -0.75
CDCA3-208ENST00000540683 MLPHQ9BV36 600 aaPredicted RBP10.37□□□□□ -0.75
CDCA3-208ENST00000540683 TDRD1Q9BXT4 1180 aaKnown RBP10.37□□□□□ -0.75
CDCA3-208ENST00000540683 CLPBQ9H078 707 aa10.37□□□□□ -0.75
CDCA3-208ENST00000540683 SYNDIG1Q9H7V2 258 aa10.37□□□□□ -0.75
CDCA3-208ENST00000540683 CARS2Q9HA77 564 aaKnown RBP10.37□□□□□ -0.75
CDCA3-208ENST00000540683 PCDH9Q9HC56 1237 aa10.37□□□□□ -0.75
CDCA3-208ENST00000540683 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.37□□□□□ -0.75
CDCA3-208ENST00000540683 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.37□□□□□ -0.75
CDCA3-208ENST00000540683 SIRPGQ9P1W8 387 aa10.37□□□□□ -0.75
CDCA3-208ENST00000540683 HEY1Q9Y5J3 304 aa10.37□□□□□ -0.75
CDCA3-208ENST00000540683 ADAMTS20P59510 1910 aa10.37□□□□□ -0.75
CDCA3-208ENST00000540683 LY6G6EA0A0G2JKS1 128 aa10.36□□□□□ -0.75
CDCA3-208ENST00000540683 TEX51A0A1B0GUA7 166 aa10.36□□□□□ -0.75
CDCA3-208ENST00000540683 NPIPB15A6NHN6 443 aaPredicted RBP10.36□□□□□ -0.75
CDCA3-208ENST00000540683 RHPN2P1A8MT19 583 aa10.36□□□□□ -0.75
CDCA3-208ENST00000540683 A8MX80 341 aa10.36□□□□□ -0.75
CDCA3-208ENST00000540683 GOLGA6L6A8MZA4 724 aa10.36□□□□□ -0.75
CDCA3-208ENST00000540683 TK2O00142 265 aa10.36□□□□□ -0.75
CDCA3-208ENST00000540683 FZD6O60353 706 aa10.36□□□□□ -0.75
CDCA3-208ENST00000540683 KRT1P04264 644 aa10.36□□□□□ -0.75
CDCA3-208ENST00000540683 ITGA2BP08514 1039 aa10.36□□□□□ -0.75
CDCA3-208ENST00000540683 TCF4P15884 667 aa10.36□□□□□ -0.75
CDCA3-208ENST00000540683 TGM2P21980 687 aa10.36□□□□□ -0.75
CDCA3-208ENST00000540683 CCKBRP32239 447 aa10.36□□□□□ -0.75
CDCA3-208ENST00000540683 ETV3P41162 512 aa10.36□□□□□ -0.75
CDCA3-208ENST00000540683 HADHBP55084 474 aaKnown RBP10.36□□□□□ -0.75
CDCA3-208ENST00000540683 INHBCP55103 352 aa10.36□□□□□ -0.75
CDCA3-208ENST00000540683 TMPRSS3P57727 454 aa10.36□□□□□ -0.75
CDCA3-208ENST00000540683 TRAF2Q12933 501 aa10.36□□□□□ -0.75
CDCA3-208ENST00000540683 MMRN1Q13201 1228 aa10.36□□□□□ -0.75
CDCA3-208ENST00000540683 COL28A1Q2UY09 1125 aa10.36□□□□□ -0.75
CDCA3-208ENST00000540683 TPRG1LQ5T0D9 272 aa10.36□□□□□ -0.75
CDCA3-208ENST00000540683 CERCAMQ5T4B2 595 aa10.36□□□□□ -0.75
CDCA3-208ENST00000540683 LRRC66Q68CR7 880 aa10.36□□□□□ -0.75
CDCA3-208ENST00000540683 TXNRD3NBQ6F5E7 133 aa10.36□□□□□ -0.75
CDCA3-208ENST00000540683 Q6ZVL8 140 aa10.36□□□□□ -0.75
CDCA3-208ENST00000540683 PDZD3Q86UT5 571 aa10.36□□□□□ -0.75
CDCA3-208ENST00000540683 NT5DC3Q86UY8 548 aa10.36□□□□□ -0.75
CDCA3-208ENST00000540683 GALNT13Q8IUC8 556 aa10.36□□□□□ -0.75
CDCA3-208ENST00000540683 CCNJLQ8IV13 435 aa10.36□□□□□ -0.75
CDCA3-208ENST00000540683 CBARPQ8N350 705 aaPredicted RBP10.36□□□□□ -0.75
CDCA3-208ENST00000540683 PGBD5Q8N414 524 aa10.36□□□□□ -0.75
CDCA3-208ENST00000540683 KYQ8NBH2 561 aa10.36□□□□□ -0.75
CDCA3-208ENST00000540683 GPR156Q8NFN8 814 aa10.36□□□□□ -0.75
CDCA3-208ENST00000540683 GPBAR1Q8TDU6 330 aa10.36□□□□□ -0.75
CDCA3-208ENST00000540683 UBE2Q2Q8WVN8 375 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms