RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 TTLL3Q9Y4R7 772 aa11.44□□□□□ -0.58
TMEM258-205ENST00000540434 NPIPB15A6NHN6 443 aaPredicted RBP11.43□□□□□ -0.58
TMEM258-205ENST00000540434 PRAMEF26H0Y7S4 382 aa11.43□□□□□ -0.58
TMEM258-205ENST00000540434 NEMP1O14524 444 aa11.43□□□□□ -0.58
TMEM258-205ENST00000540434 MT-CYBP00156 380 aaPredicted RBP11.43□□□□□ -0.58
TMEM258-205ENST00000540434 ITGAVP06756 1048 aa11.43□□□□□ -0.58
TMEM258-205ENST00000540434 ZFXP17010 805 aaPredicted RBP11.43□□□□□ -0.58
TMEM258-205ENST00000540434 TGM2P21980 687 aa11.43□□□□□ -0.58
TMEM258-205ENST00000540434 RBL1P28749 1068 aa11.43□□□□□ -0.58
TMEM258-205ENST00000540434 PTPN7P35236 360 aa11.43□□□□□ -0.58
TMEM258-205ENST00000540434 IGFALSP35858 605 aa11.43□□□□□ -0.58
TMEM258-205ENST00000540434 HSPA9P38646 679 aaKnown RBP11.43□□□□□ -0.58
TMEM258-205ENST00000540434 CD86P42081 329 aa11.43□□□□□ -0.58
TMEM258-205ENST00000540434 NR2C2P49116 596 aa11.43□□□□□ -0.58
TMEM258-205ENST00000540434 UCNP55089 124 aa11.43□□□□□ -0.58
TMEM258-205ENST00000540434 NXPH1P58417 271 aa11.43□□□□□ -0.58
TMEM258-205ENST00000540434 INSM1Q01101 510 aaPredicted RBP11.43□□□□□ -0.58
TMEM258-205ENST00000540434 KLF1Q13351 362 aaPredicted RBP11.43□□□□□ -0.58
TMEM258-205ENST00000540434 ILKQ13418 452 aa11.43□□□□□ -0.58
TMEM258-205ENST00000540434 NOMO1Q15155 1222 aa11.43□□□□□ -0.58
TMEM258-205ENST00000540434 CDKN3Q16667 212 aa11.43□□□□□ -0.58
TMEM258-205ENST00000540434 WSCD2Q2TBF2 565 aa11.43□□□□□ -0.58
TMEM258-205ENST00000540434 SETMARQ53H47 684 aaPredicted RBP11.43□□□□□ -0.58
TMEM258-205ENST00000540434 TEX44Q53QW1 395 aa11.43□□□□□ -0.58
TMEM258-205ENST00000540434 ODF2Q5BJF6 829 aa11.43□□□□□ -0.58
TMEM258-205ENST00000540434 ZNF542PQ5EBM4 170 aa11.43□□□□□ -0.58
TMEM258-205ENST00000540434 MEI1Q5TIA1 1274 aa11.43□□□□□ -0.58
TMEM258-205ENST00000540434 KIAA1161Q6NSJ0 714 aa11.43□□□□□ -0.58
TMEM258-205ENST00000540434 TIGD7Q6NT04 549 aaPredicted RBP11.43□□□□□ -0.58
TMEM258-205ENST00000540434 BRAT1Q6PJG6 821 aa11.43□□□□□ -0.58
TMEM258-205ENST00000540434 KANSL1Q7Z3B3 1105 aa11.43□□□□□ -0.58
TMEM258-205ENST00000540434 KDELC2Q7Z4H8 507 aa11.43□□□□□ -0.58
TMEM258-205ENST00000540434 ABI3BPQ7Z7G0 1075 aa11.43□□□□□ -0.58
TMEM258-205ENST00000540434 ZNF567Q8N184 647 aa11.43□□□□□ -0.58
TMEM258-205ENST00000540434 MFSD2AQ8NA29 543 aa11.43□□□□□ -0.58
TMEM258-205ENST00000540434 NSMCE1Q8WV22 266 aa11.43□□□□□ -0.58
TMEM258-205ENST00000540434 SPOCK2Q92563 424 aa11.43□□□□□ -0.58
TMEM258-205ENST00000540434 P3H4Q92791 437 aa11.43□□□□□ -0.58
TMEM258-205ENST00000540434 CALR3Q96L12 384 aaKnown RBP11.43□□□□□ -0.58
TMEM258-205ENST00000540434 TEKT5Q96M29 485 aa11.43□□□□□ -0.58
TMEM258-205ENST00000540434 RBM15Q96T37 977 aaKnown RBP eCLIP11.43□□□□□ -0.58
TMEM258-205ENST00000540434 POLR1EQ9GZS1 481 aaKnown RBP11.43□□□□□ -0.58
TMEM258-205ENST00000540434 USP29Q9HBJ7 922 aa11.43□□□□□ -0.58
TMEM258-205ENST00000540434 UBP1Q9NZI7 540 aa11.43□□□□□ -0.58
TMEM258-205ENST00000540434 KLF15Q9UIH9 416 aa11.43□□□□□ -0.58
TMEM258-205ENST00000540434 CLCA2Q9UQC9 943 aa11.43□□□□□ -0.58
TMEM258-205ENST00000540434 DMTF1Q9Y222 760 aa11.43□□□□□ -0.58
TMEM258-205ENST00000540434 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.43□□□□□ -0.58
TMEM258-205ENST00000540434 LRRK2Q5S007 2527 aa11.43□□□□□ -0.58
TMEM258-205ENST00000540434 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.42□□□□□ -0.58
TMEM258-205ENST00000540434 USP27XA6NNY8 438 aa11.42□□□□□ -0.58
TMEM258-205ENST00000540434 APOC4-APOC2K7ER74 178 aa11.42□□□□□ -0.58
TMEM258-205ENST00000540434 K7ESM1 405 aa11.42□□□□□ -0.58
TMEM258-205ENST00000540434 CPP00450 1065 aa11.42□□□□□ -0.58
TMEM258-205ENST00000540434 APOC2P02655 101 aa11.42□□□□□ -0.58
TMEM258-205ENST00000540434 CCDC175P0C221 793 aa11.42□□□□□ -0.58
TMEM258-205ENST00000540434 THEGLP0DJG4 465 aa11.42□□□□□ -0.58
TMEM258-205ENST00000540434 HNRNPA2B1P22626 353 aaKnown RBP11.42□□□□□ -0.58
TMEM258-205ENST00000540434 COPS2P61201 443 aa11.42□□□□□ -0.58
TMEM258-205ENST00000540434 STAT4Q14765 748 aa11.42□□□□□ -0.58
TMEM258-205ENST00000540434 GRM3Q14832 879 aa11.42□□□□□ -0.58
TMEM258-205ENST00000540434 CNGA3Q16281 694 aa11.42□□□□□ -0.58
TMEM258-205ENST00000540434 LINC00303Q3SY05 128 aa11.42□□□□□ -0.58
TMEM258-205ENST00000540434 ATG14Q6ZNE5 492 aa11.42□□□□□ -0.58
TMEM258-205ENST00000540434 Q6ZSR6 202 aa11.42□□□□□ -0.58
TMEM258-205ENST00000540434 DPPA4Q7L190 304 aa11.42□□□□□ -0.58
TMEM258-205ENST00000540434 HSD11B1LQ7Z5J1 315 aa11.42□□□□□ -0.58
TMEM258-205ENST00000540434 ADAT2Q7Z6V5 191 aaKnown RBP11.42□□□□□ -0.58
TMEM258-205ENST00000540434 TFB1MQ8WVM0 346 aaKnown RBP11.42□□□□□ -0.58
TMEM258-205ENST00000540434 EID2BQ96D98 161 aa11.42□□□□□ -0.58
TMEM258-205ENST00000540434 IMP4Q96G21 291 aaKnown RBP11.42□□□□□ -0.58
TMEM258-205ENST00000540434 QKIQ96PU8 341 aaKnown RBP eCLIP11.42□□□□□ -0.58
TMEM258-205ENST00000540434 LENG8Q96PV6 779 aaPredicted RBP11.42□□□□□ -0.58
TMEM258-205ENST00000540434 TRIB3Q96RU7 358 aa11.42□□□□□ -0.58
TMEM258-205ENST00000540434 TLR10Q9BXR5 811 aa11.42□□□□□ -0.58
TMEM258-205ENST00000540434 TDRD1Q9BXT4 1180 aaKnown RBP11.42□□□□□ -0.58
TMEM258-205ENST00000540434 GLOD4Q9HC38 313 aa11.42□□□□□ -0.58
TMEM258-205ENST00000540434 GPR27Q9NS67 375 aa11.42□□□□□ -0.58
TMEM258-205ENST00000540434 EFR3BQ9Y2G0 817 aa11.42□□□□□ -0.58
TMEM258-205ENST00000540434 PPIL1Q9Y3C6 166 aa11.42□□□□□ -0.58
TMEM258-205ENST00000540434 HS3ST3A1Q9Y663 406 aa11.42□□□□□ -0.58
TMEM258-205ENST00000540434 CREBBPQ92793 2442 aa11.42□□□□□ -0.58
TMEM258-205ENST00000540434 ABCA12Q86UK0 2595 aa11.42□□□□□ -0.58
TMEM258-205ENST00000540434 KIF26BQ2KJY2 2108 aa11.42□□□□□ -0.58
TMEM258-205ENST00000540434 DOPEY1Q5JWR5 2465 aa11.42□□□□□ -0.58
TMEM258-205ENST00000540434 COL27A1Q8IZC6 1860 aaPredicted RBP11.41□□□□□ -0.58
TMEM258-205ENST00000540434 PPP1R12AO14974 1030 aaPredicted RBP11.41□□□□□ -0.58
TMEM258-205ENST00000540434 SUV39H1O43463 412 aa11.41□□□□□ -0.58
TMEM258-205ENST00000540434 KRT86O43790 486 aa11.41□□□□□ -0.58
TMEM258-205ENST00000540434 SOCS5O75159 536 aa11.41□□□□□ -0.58
TMEM258-205ENST00000540434 TM7SF2O76062 418 aa11.41□□□□□ -0.58
TMEM258-205ENST00000540434 RECQL5O94762 991 aaPredicted RBP11.41□□□□□ -0.58
TMEM258-205ENST00000540434 PIRTP0C851 137 aa11.41□□□□□ -0.58
TMEM258-205ENST00000540434 CKMT2P17540 419 aa11.41□□□□□ -0.58
TMEM258-205ENST00000540434 NFKB1P19838 968 aa11.41□□□□□ -0.58
TMEM258-205ENST00000540434 XPAP23025 273 aaPredicted RBP11.41□□□□□ -0.58
TMEM258-205ENST00000540434 C21orf59P57076 290 aa11.41□□□□□ -0.58
TMEM258-205ENST00000540434 PTSQ03393 145 aa11.41□□□□□ -0.58
TMEM258-205ENST00000540434 CCDC15Q0P6D6 951 aa11.41□□□□□ -0.58
TMEM258-205ENST00000540434 OLIG2Q13516 323 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms