RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 ASB9Q96DX5 294 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 FBXL18Q96ME1 805 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 CTRCQ99895 268 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 C20orf27Q9GZN8 174 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 REXO4Q9GZR2 422 aaKnown RBP8.7□□□□□ -1.02
DDB1-217ENST00000540166 OLAHQ9NV23 265 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 NCKIPSDQ9NZQ3 722 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 VTI1BQ9UEU0 232 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 ZNF221Q9UK13 617 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 IPPQ9Y573 584 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 TEX264Q9Y6I9 313 aa8.7□□□□□ -1.02
DDB1-217ENST00000540166 DHRS12A0PJE2 317 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 EVPLLA8MZ36 301 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 CENPBD1B2RD01 187 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 C9IYK1 514 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 AURKAO14965 403 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 LRCH4O75427 683 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 CRCPO75575 148 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 PRKACBP22694 351 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 NR4A2P43354 598 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 MAP3K7CLP57077 242 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 IFRD2Q12894 506 aaPredicted RBP8.69□□□□□ -1.02
DDB1-217ENST00000540166 FASTKQ14296 549 aaKnown RBP8.69□□□□□ -1.02
DDB1-217ENST00000540166 HERC3Q15034 1050 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 PSMD5Q16401 504 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 LSM12Q3MHD2 195 aaKnown RBP8.69□□□□□ -1.02
DDB1-217ENST00000540166 ZNF280DQ6N043 979 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 TRMT10BQ6PF06 316 aaKnown RBP8.69□□□□□ -1.02
DDB1-217ENST00000540166 ARMC8Q8IUR7 673 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 LRRC49Q8IUZ0 686 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 PNPT1Q8TCS8 783 aaKnown RBP8.69□□□□□ -1.02
DDB1-217ENST00000540166 SPPL3Q8TCT6 385 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 MZB1Q8WU39 189 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 VPS33AQ96AX1 596 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 RANBP9Q96S59 729 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 SLC29A1Q99808 456 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 TP63Q9H3D4 680 aaPredicted RBP8.69□□□□□ -1.02
DDB1-217ENST00000540166 NEK6Q9HC98 313 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 RPRD1BQ9NQG5 326 aaKnown RBP8.69□□□□□ -1.02
DDB1-217ENST00000540166 RNF19AQ9NV58 838 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 PCDHGA3Q9Y5H0 932 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 CROCCQ5TZA2 2017 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 ZDBF2Q9HCK1 2354 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 FAM25AB3EWG3 89 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 FAM25CB3EWG5 89 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 FAM25GB3EWG6 89 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 ZBTB14O43829 449 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 GUCY1B2O75343 617 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 VNN1O95497 513 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 C8BP07358 591 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 CHRNB1P11230 501 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 ALOX12P18054 663 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 ITIH1P19827 911 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 RBL1P28749 1068 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 TMBIM6P55061 237 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 GNG2P59768 71 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 DAB2P98082 770 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 FCHO2Q0JRZ9 810 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 CBX2Q14781 532 aaPredicted RBP8.69□□□□□ -1.02
DDB1-217ENST00000540166 BCL2A1Q16548 175 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 VASH1Q7L8A9 365 aaPredicted RBP8.69□□□□□ -1.02
DDB1-217ENST00000540166 ANKRD13BQ86YJ7 626 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 C12orf76Q8N812 135 aaPredicted RBP8.69□□□□□ -1.02
DDB1-217ENST00000540166 CNTD1Q8N815 330 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 ATOH1Q92858 354 aaPredicted RBP8.69□□□□□ -1.02
DDB1-217ENST00000540166 HDAC11Q96DB2 347 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 EBNA1BP2Q99848 306 aaKnown RBP8.69□□□□□ -1.02
DDB1-217ENST00000540166 ANKRD60Q9BZ19 345 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 IRF2BPLQ9H1B7 796 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 PRO3102Q9H379 93 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 RMND5AQ9H871 391 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 PRM3Q9NNZ6 103 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 PIH1D1Q9NWS0 290 aaKnown RBP8.69□□□□□ -1.02
DDB1-217ENST00000540166 MTRRQ9UBK8 725 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 TEX28O15482 410 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 LDLRP01130 860 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 POLBP06746 335 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 GPD1P21695 349 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 MPSTP25325 297 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 HPCAL1P37235 193 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 OPRL1P41146 370 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 TNFSF9P41273 254 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 GLRBP48167 497 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 NAGLUP54802 743 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 CYP51A1Q16850 503 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 TRIM71Q2Q1W2 868 aaKnown RBP8.69□□□□□ -1.02
DDB1-217ENST00000540166 ZFP69Q49AA0 526 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 PIGGQ5H8A4 983 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 CCNYL2Q5T2Q4 361 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 TMTC4Q5T4D3 741 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 CHSY3Q70JA7 882 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 LYSMD3Q7Z3D4 306 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 GATAD2AQ86YP4 633 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 DDIASQ8IXT1 998 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 CPNE9Q8IYJ1 553 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 CADM3Q8N126 398 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 MCUQ8NE86 351 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 NTPCRQ9BSD7 190 aaKnown RBP8.69□□□□□ -1.02
DDB1-217ENST00000540166 TTPALQ9BTX7 342 aa8.69□□□□□ -1.02
DDB1-217ENST00000540166 NPLQ9BXD5 320 aaPredicted RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms