RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 PTGR2Q8N8N7 351 aaPredicted RBP11.52□□□□□ -0.57
C11orf54-214ENST00000540113 NAT14Q8WUY8 206 aa11.52□□□□□ -0.57
C11orf54-214ENST00000540113 TSPAN17Q96FV3 270 aa11.52□□□□□ -0.57
C11orf54-214ENST00000540113 TRIM8Q9BZR9 551 aa11.52□□□□□ -0.57
C11orf54-214ENST00000540113 EML4Q9HC35 981 aaKnown RBP11.52□□□□□ -0.57
C11orf54-214ENST00000540113 TLR8Q9NR97 1041 aaKnown RBP11.52□□□□□ -0.57
C11orf54-214ENST00000540113 CACNA2D2Q9NY47 1150 aa11.52□□□□□ -0.57
C11orf54-214ENST00000540113 PDP2Q9P2J9 529 aa11.52□□□□□ -0.57
C11orf54-214ENST00000540113 GALPQ9UBC7 116 aa11.52□□□□□ -0.57
C11orf54-214ENST00000540113 RIMS3Q9UJD0 308 aa11.52□□□□□ -0.57
C11orf54-214ENST00000540113 PCDHB7Q9Y5E2 793 aa11.52□□□□□ -0.57
C11orf54-214ENST00000540113 SPO11Q9Y5K1 396 aa11.52□□□□□ -0.57
C11orf54-214ENST00000540113 ANKRD12Q6UB98 2062 aa11.52□□□□□ -0.57
C11orf54-214ENST00000540113 ADAM12O43184 909 aa11.51□□□□□ -0.57
C11orf54-214ENST00000540113 ALDOCP09972 364 aaKnown RBP11.51□□□□□ -0.57
C11orf54-214ENST00000540113 ATF6P18850 670 aa11.51□□□□□ -0.57
C11orf54-214ENST00000540113 TACR2P21452 398 aa11.51□□□□□ -0.57
C11orf54-214ENST00000540113 FMO4P31512 558 aa11.51□□□□□ -0.57
C11orf54-214ENST00000540113 ECT2LQ008S8 904 aa11.51□□□□□ -0.57
C11orf54-214ENST00000540113 IL10RBQ08334 325 aa11.51□□□□□ -0.57
C11orf54-214ENST00000540113 HERC3Q15034 1050 aa11.51□□□□□ -0.57
C11orf54-214ENST00000540113 C6orf52Q5T4I8 152 aa11.51□□□□□ -0.57
C11orf54-214ENST00000540113 CHSY3Q70JA7 882 aa11.51□□□□□ -0.57
C11orf54-214ENST00000540113 CRIPAKQ8N1N5 446 aa11.51□□□□□ -0.57
C11orf54-214ENST00000540113 TTC16Q8NEE8 873 aa11.51□□□□□ -0.57
C11orf54-214ENST00000540113 ZNF483Q8TF39 744 aaPredicted RBP11.51□□□□□ -0.57
C11orf54-214ENST00000540113 SPATA17Q96L03 361 aa11.51□□□□□ -0.57
C11orf54-214ENST00000540113 CNBD2Q96M20 576 aa11.51□□□□□ -0.57
C11orf54-214ENST00000540113 ZBED2Q9BTP6 218 aa11.51□□□□□ -0.57
C11orf54-214ENST00000540113 OLA1Q9NTK5 396 aaKnown RBP11.51□□□□□ -0.57
C11orf54-214ENST00000540113 TSR3Q9UJK0 312 aaKnown RBP11.51□□□□□ -0.57
C11orf54-214ENST00000540113 BTRCQ9Y297 605 aa11.51□□□□□ -0.57
C11orf54-214ENST00000540113 PRORSD1PA6NEY8 169 aa11.51□□□□□ -0.57
C11orf54-214ENST00000540113 NCF1BA6NI72 391 aaPredicted RBP11.51□□□□□ -0.57
C11orf54-214ENST00000540113 NCF1CA8MVU1 366 aaPredicted RBP11.51□□□□□ -0.57
C11orf54-214ENST00000540113 SLC22A2O15244 555 aa11.51□□□□□ -0.57
C11orf54-214ENST00000540113 TLR5O60602 858 aa11.51□□□□□ -0.57
C11orf54-214ENST00000540113 BCAS2O75934 225 aaPredicted RBP11.51□□□□□ -0.57
C11orf54-214ENST00000540113 WISP3O95389 354 aaPredicted RBP11.51□□□□□ -0.57
C11orf54-214ENST00000540113 CRTAMO95727 393 aa11.51□□□□□ -0.57
C11orf54-214ENST00000540113 NCF1P14598 390 aaPredicted RBP11.51□□□□□ -0.57
C11orf54-214ENST00000540113 RPL17P18621 184 aaKnown RBP11.51□□□□□ -0.57
C11orf54-214ENST00000540113 PMLP29590 882 aa11.51□□□□□ -0.57
C11orf54-214ENST00000540113 SGSHP51688 502 aa11.51□□□□□ -0.57
C11orf54-214ENST00000540113 RPS24P62847 133 aaKnown RBP11.51□□□□□ -0.57
C11orf54-214ENST00000540113 CDKL1Q00532 357 aa11.51□□□□□ -0.57
C11orf54-214ENST00000540113 LRP8Q14114 963 aa11.51□□□□□ -0.57
C11orf54-214ENST00000540113 SLC14A2Q15849 920 aa11.51□□□□□ -0.57
C11orf54-214ENST00000540113 UGT2A3Q6UWM9 527 aa11.51□□□□□ -0.57
C11orf54-214ENST00000540113 SLAIN1Q8ND83 568 aa11.51□□□□□ -0.57
C11orf54-214ENST00000540113 TRPC4APQ8TEL6 797 aa11.51□□□□□ -0.57
C11orf54-214ENST00000540113 ESAMQ96AP7 390 aa11.51□□□□□ -0.57
C11orf54-214ENST00000540113 POLR1EQ9GZS1 481 aaKnown RBP11.51□□□□□ -0.57
C11orf54-214ENST00000540113 MID1IP1Q9NPA3 183 aa11.51□□□□□ -0.57
C11orf54-214ENST00000540113 C6orf203Q9P0P8 240 aaPredicted RBP11.51□□□□□ -0.57
C11orf54-214ENST00000540113 APPL1Q9UKG1 709 aa11.51□□□□□ -0.57
C11orf54-214ENST00000540113 PHF24Q9UPV7 400 aa11.51□□□□□ -0.57
C11orf54-214ENST00000540113 LAMA2P24043 3122 aaKnown RBP11.5□□□□□ -0.57
C11orf54-214ENST00000540113 C15orf38-AP3S2A0A0A6YYH1 394 aa11.5□□□□□ -0.57
C11orf54-214ENST00000540113 TRIM38O00635 465 aa11.5□□□□□ -0.57
C11orf54-214ENST00000540113 PRAMEF11O60813 436 aa11.5□□□□□ -0.57
C11orf54-214ENST00000540113 OR6B1O95007 311 aa11.5□□□□□ -0.57
C11orf54-214ENST00000540113 PAPSS2O95340 614 aaPredicted RBP11.5□□□□□ -0.57
C11orf54-214ENST00000540113 GJB5O95377 273 aa11.5□□□□□ -0.57
C11orf54-214ENST00000540113 GALTP07902 379 aa11.5□□□□□ -0.57
C11orf54-214ENST00000540113 FDXRP22570 491 aa11.5□□□□□ -0.57
C11orf54-214ENST00000540113 SOX11P35716 441 aa11.5□□□□□ -0.57
C11orf54-214ENST00000540113 SCNN1BP51168 640 aa11.5□□□□□ -0.57
C11orf54-214ENST00000540113 GRB7Q14451 532 aa11.5□□□□□ -0.57
C11orf54-214ENST00000540113 SQLEQ14534 574 aa11.5□□□□□ -0.57
C11orf54-214ENST00000540113 NRF1Q16656 503 aa11.5□□□□□ -0.57
C11orf54-214ENST00000540113 FAM45BPQ6NSW5 357 aa11.5□□□□□ -0.57
C11orf54-214ENST00000540113 ARPINQ7Z6K5 226 aa11.5□□□□□ -0.57
C11orf54-214ENST00000540113 SATL1Q86VE3 508 aa11.5□□□□□ -0.57
C11orf54-214ENST00000540113 FAM126BQ8IXS8 530 aa11.5□□□□□ -0.57
C11orf54-214ENST00000540113 FAM45AQ8TCE6 357 aa11.5□□□□□ -0.57
C11orf54-214ENST00000540113 LPGAT1Q92604 370 aa11.5□□□□□ -0.57
C11orf54-214ENST00000540113 AKTIPQ9H8T0 292 aa11.5□□□□□ -0.57
C11orf54-214ENST00000540113 PAPOLBQ9NRJ5 636 aaKnown RBP11.5□□□□□ -0.57
C11orf54-214ENST00000540113 VPS28Q9UK41 221 aa11.5□□□□□ -0.57
C11orf54-214ENST00000540113 DNAJC15Q9Y5T4 150 aa11.5□□□□□ -0.57
C11orf54-214ENST00000540113 ZFP37Q9Y6Q3 630 aaPredicted RBP11.5□□□□□ -0.57
C11orf54-214ENST00000540113 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.5□□□□□ -0.57
C11orf54-214ENST00000540113 SLC38A8A6NNN8 435 aa11.5□□□□□ -0.57
C11orf54-214ENST00000540113 MRASO14807 208 aa11.5□□□□□ -0.57
C11orf54-214ENST00000540113 GPR39O43194 453 aa11.5□□□□□ -0.57
C11orf54-214ENST00000540113 TSPAN3O60637 253 aa11.5□□□□□ -0.57
C11orf54-214ENST00000540113 CDK14O94921 469 aa11.5□□□□□ -0.57
C11orf54-214ENST00000540113 ALDH2P05091 517 aa11.5□□□□□ -0.57
C11orf54-214ENST00000540113 LINC00032P0C843 101 aa11.5□□□□□ -0.57
C11orf54-214ENST00000540113 HSPA1AP0DMV8 641 aaKnown RBP11.5□□□□□ -0.57
C11orf54-214ENST00000540113 HSPA1BP0DMV9 641 aaKnown RBP11.5□□□□□ -0.57
C11orf54-214ENST00000540113 ADSLP30566 484 aaPredicted RBP11.5□□□□□ -0.57
C11orf54-214ENST00000540113 RING1Q06587 406 aa11.5□□□□□ -0.57
C11orf54-214ENST00000540113 KIF19Q2TAC6 998 aa11.5□□□□□ -0.57
C11orf54-214ENST00000540113 UGT3A2Q3SY77 523 aa11.5□□□□□ -0.57
C11orf54-214ENST00000540113 PAQR3Q6TCH7 311 aa11.5□□□□□ -0.57
C11orf54-214ENST00000540113 SCIMPQ6UWF3 145 aa11.5□□□□□ -0.57
C11orf54-214ENST00000540113 LARP4Q71RC2 724 aaKnown RBP eCLIP11.5□□□□□ -0.57
C11orf54-214ENST00000540113 FUNDC1Q8IVP5 155 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms