RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 ABL2P42684 1182 aa16.88■□□□□ 0.29
COPS3-212ENST00000539941 SERPINB4P48594 390 aa16.88■□□□□ 0.29
COPS3-212ENST00000539941 USP10Q14694 798 aaKnown RBP16.88■□□□□ 0.29
COPS3-212ENST00000539941 TAF1BQ53T94 588 aaPredicted RBP16.88■□□□□ 0.29
COPS3-212ENST00000539941 GRAMD4Q6IC98 578 aa16.88■□□□□ 0.29
COPS3-212ENST00000539941 TANGO2Q6ICL3 276 aa16.88■□□□□ 0.29
COPS3-212ENST00000539941 CMC1Q7Z7K0 106 aa16.88■□□□□ 0.29
COPS3-212ENST00000539941 TRIM42Q8IWZ5 723 aa16.88■□□□□ 0.29
COPS3-212ENST00000539941 CPA6Q8N4T0 437 aa16.88■□□□□ 0.29
COPS3-212ENST00000539941 TEX9Q8N6V9 391 aa16.88■□□□□ 0.29
COPS3-212ENST00000539941 MRGPRX3Q96LB0 322 aa16.88■□□□□ 0.29
COPS3-212ENST00000539941 LYSMD1Q96S90 227 aa16.88■□□□□ 0.29
COPS3-212ENST00000539941 EBF3Q9H4W6 596 aa16.88■□□□□ 0.29
COPS3-212ENST00000539941 SUV39H2Q9H5I1 410 aa16.88■□□□□ 0.29
COPS3-212ENST00000539941 CLEC1BQ9P126 229 aa16.88■□□□□ 0.29
COPS3-212ENST00000539941 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.88■□□□□ 0.29
COPS3-212ENST00000539941 CDH22Q9UJ99 828 aa16.88■□□□□ 0.29
COPS3-212ENST00000539941 TLK1Q9UKI8 766 aa16.88■□□□□ 0.29
COPS3-212ENST00000539941 PHTF1Q9UMS5 762 aa16.88■□□□□ 0.29
COPS3-212ENST00000539941 PPIL1Q9Y3C6 166 aa16.88■□□□□ 0.29
COPS3-212ENST00000539941 DOCK8Q8NF50 2099 aa16.88■□□□□ 0.29
COPS3-212ENST00000539941 BIRC5O15392 142 aa16.88■□□□□ 0.29
COPS3-212ENST00000539941 BUD23O43709 281 aaKnown RBP16.88■□□□□ 0.29
COPS3-212ENST00000539941 HAUS5O94927 633 aa16.88■□□□□ 0.29
COPS3-212ENST00000539941 S1PR4O95977 384 aa16.88■□□□□ 0.29
COPS3-212ENST00000539941 C2P06681 752 aa16.88■□□□□ 0.29
COPS3-212ENST00000539941 COL6A2P12110 1019 aa16.88■□□□□ 0.29
COPS3-212ENST00000539941 HMGCLP35914 325 aa16.88■□□□□ 0.29
COPS3-212ENST00000539941 MTHFRP42898 656 aa16.88■□□□□ 0.29
COPS3-212ENST00000539941 ABCG1P45844 678 aa16.88■□□□□ 0.29
COPS3-212ENST00000539941 ELF3P78545 371 aaPredicted RBP16.88■□□□□ 0.29
COPS3-212ENST00000539941 TMPRSS15P98073 1019 aa16.88■□□□□ 0.29
COPS3-212ENST00000539941 EIF4HQ15056 248 aaKnown RBP16.88■□□□□ 0.29
COPS3-212ENST00000539941 CTC1Q2NKJ3 1217 aa16.88■□□□□ 0.29
COPS3-212ENST00000539941 TYSND1Q2T9J0 566 aa16.88■□□□□ 0.29
COPS3-212ENST00000539941 GAB4Q2WGN9 574 aa16.88■□□□□ 0.29
COPS3-212ENST00000539941 VITQ6UXI7 678 aa16.88■□□□□ 0.29
COPS3-212ENST00000539941 DPY19L3Q6ZPD9 716 aa16.88■□□□□ 0.29
COPS3-212ENST00000539941 CLEC14AQ86T13 490 aa16.88■□□□□ 0.29
COPS3-212ENST00000539941 PAF1Q8N7H5 531 aa16.88■□□□□ 0.29
COPS3-212ENST00000539941 KDM1BQ8NB78 822 aa16.88■□□□□ 0.29
COPS3-212ENST00000539941 FRS2Q8WU20 508 aa16.88■□□□□ 0.29
COPS3-212ENST00000539941 VOPP1Q96AW1 172 aa16.88■□□□□ 0.29
COPS3-212ENST00000539941 SEC16BQ96JE7 1060 aa16.88■□□□□ 0.29
COPS3-212ENST00000539941 TCF12Q99081 682 aa16.88■□□□□ 0.29
COPS3-212ENST00000539941 GPR63Q9BZJ6 419 aa16.88■□□□□ 0.29
COPS3-212ENST00000539941 SUDS3Q9H7L9 328 aaPredicted RBP16.88■□□□□ 0.29
COPS3-212ENST00000539941 FBXO6Q9NRD1 293 aaPredicted RBP16.88■□□□□ 0.29
COPS3-212ENST00000539941 INTS10Q9NVR2 710 aaKnown RBP16.88■□□□□ 0.29
COPS3-212ENST00000539941 POLR3BQ9NW08 1133 aaPredicted RBP16.88■□□□□ 0.29
COPS3-212ENST00000539941 DEC1Q9P2X7 70 aa16.88■□□□□ 0.29
COPS3-212ENST00000539941 PKP3Q9Y446 797 aa16.88■□□□□ 0.29
COPS3-212ENST00000539941 CAPN8A6NHC0 703 aa16.87■□□□□ 0.29
COPS3-212ENST00000539941 CCL22O00626 93 aa16.87■□□□□ 0.29
COPS3-212ENST00000539941 TRIM24O15164 1050 aa16.87■□□□□ 0.29
COPS3-212ENST00000539941 SMNDC1O75940 238 aaKnown RBP eCLIP16.87■□□□□ 0.29
COPS3-212ENST00000539941 STMN1P16949 149 aa16.87■□□□□ 0.29
COPS3-212ENST00000539941 RAB10P61026 200 aa16.87■□□□□ 0.29
COPS3-212ENST00000539941 PTPRCAPQ14761 206 aa16.87■□□□□ 0.29
COPS3-212ENST00000539941 E2F5Q15329 346 aa16.87■□□□□ 0.29
COPS3-212ENST00000539941 CCDC153Q494R4 210 aa16.87■□□□□ 0.29
COPS3-212ENST00000539941 FASTKD1Q53R41 847 aaKnown RBP16.87■□□□□ 0.29
COPS3-212ENST00000539941 N4BP2L1Q5TBK1 243 aaPredicted RBP16.87■□□□□ 0.29
COPS3-212ENST00000539941 CNSTQ6PJW8 725 aa16.87■□□□□ 0.29
COPS3-212ENST00000539941 Q6ZVU0 165 aa16.87■□□□□ 0.29
COPS3-212ENST00000539941 C12orf40Q86WS4 652 aa16.87■□□□□ 0.29
COPS3-212ENST00000539941 YAF2Q8IY57 180 aa16.87■□□□□ 0.29
COPS3-212ENST00000539941 ANKS4BQ8N8V4 417 aa16.87■□□□□ 0.29
COPS3-212ENST00000539941 OR2A12Q8NGT7 310 aa16.87■□□□□ 0.29
COPS3-212ENST00000539941 RAB3IL1Q8TBN0 382 aa16.87■□□□□ 0.29
COPS3-212ENST00000539941 ZNF75CPQ92670 426 aaPredicted RBP16.87■□□□□ 0.29
COPS3-212ENST00000539941 ELSPBP1Q96BH3 223 aa16.87■□□□□ 0.29
COPS3-212ENST00000539941 GRAMD1AQ96CP6 724 aa16.87■□□□□ 0.29
COPS3-212ENST00000539941 TSPAN17Q96FV3 270 aa16.87■□□□□ 0.29
COPS3-212ENST00000539941 ZFYVE19Q96K21 471 aa16.87■□□□□ 0.29
COPS3-212ENST00000539941 MYADMQ96S97 322 aa16.87■□□□□ 0.29
COPS3-212ENST00000539941 CIPCQ9C0C6 399 aa16.87■□□□□ 0.29
COPS3-212ENST00000539941 C12orf65Q9H3J6 166 aaKnown RBP16.87■□□□□ 0.29
COPS3-212ENST00000539941 HPS4Q9NQG7 708 aa16.87■□□□□ 0.29
COPS3-212ENST00000539941 IL17CQ9P0M4 197 aa16.87■□□□□ 0.29
COPS3-212ENST00000539941 MARCH4Q9P2E8 410 aaPredicted RBP16.87■□□□□ 0.29
COPS3-212ENST00000539941 VPS9D1Q9Y2B5 631 aa16.87■□□□□ 0.29
COPS3-212ENST00000539941 OR51F1A6NGY5 319 aa16.86■□□□□ 0.29
COPS3-212ENST00000539941 KLF11O14901 512 aa16.86■□□□□ 0.29
COPS3-212ENST00000539941 PFDN6O15212 129 aa16.86■□□□□ 0.29
COPS3-212ENST00000539941 PLIN3O60664 434 aa16.86■□□□□ 0.29
COPS3-212ENST00000539941 F7P08709 466 aaPredicted RBP16.86■□□□□ 0.29
COPS3-212ENST00000539941 GKP32189 559 aa16.86■□□□□ 0.29
COPS3-212ENST00000539941 RPS6KA3P51812 740 aa16.86■□□□□ 0.29
COPS3-212ENST00000539941 STC1P52823 247 aa16.86■□□□□ 0.29
COPS3-212ENST00000539941 SLC12A2P55011 1212 aa16.86■□□□□ 0.29
COPS3-212ENST00000539941 ITIH4Q14624 930 aa16.86■□□□□ 0.29
COPS3-212ENST00000539941 PPM1JQ5JR12 505 aa16.86■□□□□ 0.29
COPS3-212ENST00000539941 SLC41A1Q8IVJ1 513 aa16.86■□□□□ 0.29
COPS3-212ENST00000539941 LRIG1Q96JA1 1093 aa16.86■□□□□ 0.29
COPS3-212ENST00000539941 ELMO2Q96JJ3 720 aa16.86■□□□□ 0.29
COPS3-212ENST00000539941 TSNARE1Q96NA8 513 aa16.86■□□□□ 0.29
COPS3-212ENST00000539941 HEPHQ9BQS7 1158 aa16.86■□□□□ 0.29
COPS3-212ENST00000539941 ZDHHC6Q9H6R6 413 aa16.86■□□□□ 0.29
COPS3-212ENST00000539941 CAB39LQ9H9S4 337 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms