RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 C2CD4AQ8NCU7 369 aaPredicted RBP11.78□□□□□ -0.52
VTN-202ENST00000539746 OR4K2Q8NGD2 314 aa11.78□□□□□ -0.52
VTN-202ENST00000539746 GANCQ8TET4 914 aa11.78□□□□□ -0.52
VTN-202ENST00000539746 HDAC10Q969S8 669 aa11.78□□□□□ -0.52
VTN-202ENST00000539746 CDKN2AIPNLQ96HQ2 116 aa11.78□□□□□ -0.52
VTN-202ENST00000539746 PWWP2AQ96N64 755 aa11.78□□□□□ -0.52
VTN-202ENST00000539746 PANX3Q96QZ0 392 aa11.78□□□□□ -0.52
VTN-202ENST00000539746 RBBP8Q99708 897 aa11.78□□□□□ -0.52
VTN-202ENST00000539746 CLPBQ9H078 707 aa11.78□□□□□ -0.52
VTN-202ENST00000539746 EPB41L4BQ9H329 900 aa11.78□□□□□ -0.52
VTN-202ENST00000539746 FAM83DQ9H4H8 585 aa11.78□□□□□ -0.52
VTN-202ENST00000539746 SYTL2Q9HCH5 934 aa11.78□□□□□ -0.52
VTN-202ENST00000539746 PREBQ9HCU5 417 aa11.78□□□□□ -0.52
VTN-202ENST00000539746 PRSS16Q9NQE7 514 aa11.78□□□□□ -0.52
VTN-202ENST00000539746 IARS2Q9NSE4 1012 aaKnown RBP11.78□□□□□ -0.52
VTN-202ENST00000539746 MKS1Q9NXB0 559 aa11.78□□□□□ -0.52
VTN-202ENST00000539746 IL17CQ9P0M4 197 aa11.78□□□□□ -0.52
VTN-202ENST00000539746 KLHL42Q9P2K6 505 aa11.78□□□□□ -0.52
VTN-202ENST00000539746 CRLS1Q9UJA2 301 aa11.78□□□□□ -0.52
VTN-202ENST00000539746 GNPTGQ9UJJ9 305 aa11.78□□□□□ -0.52
VTN-202ENST00000539746 MMP17Q9ULZ9 603 aa11.78□□□□□ -0.52
VTN-202ENST00000539746 SHROOM3Q8TF72 1996 aa11.78□□□□□ -0.52
VTN-202ENST00000539746 NUP205Q92621 2012 aa11.77□□□□□ -0.52
VTN-202ENST00000539746 MYO7AQ13402 2215 aa11.77□□□□□ -0.53
VTN-202ENST00000539746 OTOL1A6NHN0 477 aaPredicted RBP11.77□□□□□ -0.53
VTN-202ENST00000539746 LRRC72A6NJI9 287 aa11.77□□□□□ -0.53
VTN-202ENST00000539746 COPEO14579 308 aa11.77□□□□□ -0.53
VTN-202ENST00000539746 PRPF4O43172 522 aaKnown RBP eCLIP11.77□□□□□ -0.53
VTN-202ENST00000539746 MAGEC1O60732 1142 aa11.77□□□□□ -0.53
VTN-202ENST00000539746 GLRA3O75311 464 aa11.77□□□□□ -0.53
VTN-202ENST00000539746 VPS26AO75436 327 aa11.77□□□□□ -0.53
VTN-202ENST00000539746 SASH3O75995 380 aa11.77□□□□□ -0.53
VTN-202ENST00000539746 AP2A2O94973 939 aa11.77□□□□□ -0.53
VTN-202ENST00000539746 ITGA2BP08514 1039 aa11.77□□□□□ -0.53
VTN-202ENST00000539746 PDHA1P08559 390 aa11.77□□□□□ -0.53
VTN-202ENST00000539746 ERVK-10P10266 1014 aa11.77□□□□□ -0.53
VTN-202ENST00000539746 C7P10643 843 aa11.77□□□□□ -0.53
VTN-202ENST00000539746 ADRB3P13945 408 aa11.77□□□□□ -0.53
VTN-202ENST00000539746 SP100P23497 879 aaPredicted RBP11.77□□□□□ -0.53
VTN-202ENST00000539746 NMBRP28336 390 aa11.77□□□□□ -0.53
VTN-202ENST00000539746 TYK2P29597 1187 aa11.77□□□□□ -0.53
VTN-202ENST00000539746 SLC8A1P32418 973 aa11.77□□□□□ -0.53
VTN-202ENST00000539746 TIE1P35590 1138 aa11.77□□□□□ -0.53
VTN-202ENST00000539746 MMP12P39900 470 aa11.77□□□□□ -0.53
VTN-202ENST00000539746 IL12RB1P42701 662 aa11.77□□□□□ -0.53
VTN-202ENST00000539746 NSG1P42857 185 aa11.77□□□□□ -0.53
VTN-202ENST00000539746 KIR2DL1P43626 348 aaPredicted RBP11.77□□□□□ -0.53
VTN-202ENST00000539746 SLCO1A2P46721 670 aa11.77□□□□□ -0.53
VTN-202ENST00000539746 ARCN1P48444 511 aaKnown RBP11.77□□□□□ -0.53
VTN-202ENST00000539746 STC1P52823 247 aa11.77□□□□□ -0.53
VTN-202ENST00000539746 PPP2R2AP63151 447 aa11.77□□□□□ -0.53
VTN-202ENST00000539746 RPS21P63220 83 aaKnown RBP11.77□□□□□ -0.53
VTN-202ENST00000539746 IL9RQ01113 521 aa11.77□□□□□ -0.53
VTN-202ENST00000539746 PLOD1Q02809 727 aaPredicted RBP11.77□□□□□ -0.53
VTN-202ENST00000539746 SGCGQ13326 291 aa11.77□□□□□ -0.53
VTN-202ENST00000539746 PON2Q15165 354 aa11.77□□□□□ -0.53
VTN-202ENST00000539746 MAP7D1Q3KQU3 841 aa11.77□□□□□ -0.53
VTN-202ENST00000539746 CCDC153Q494R4 210 aa11.77□□□□□ -0.53
VTN-202ENST00000539746 TMEM52BQ4KMG9 183 aa11.77□□□□□ -0.53
VTN-202ENST00000539746 SETMARQ53H47 684 aaPredicted RBP11.77□□□□□ -0.53
VTN-202ENST00000539746 ZRANB3Q5FWF4 1079 aa11.77□□□□□ -0.53
VTN-202ENST00000539746 LDLRAP1Q5SW96 308 aa11.77□□□□□ -0.53
VTN-202ENST00000539746 EGFLAMQ63HQ2 1017 aa11.77□□□□□ -0.53
VTN-202ENST00000539746 ESRP1Q6NXG1 681 aaKnown RBP11.77□□□□□ -0.53
VTN-202ENST00000539746 TBC1D1Q86TI0 1168 aaPredicted RBP11.77□□□□□ -0.53
VTN-202ENST00000539746 TRAM1L1Q8N609 369 aa11.77□□□□□ -0.53
VTN-202ENST00000539746 OR6K2Q8NGY2 324 aa11.77□□□□□ -0.53
VTN-202ENST00000539746 UHMK1Q8TAS1 419 aaKnown RBP11.77□□□□□ -0.53
VTN-202ENST00000539746 EPS8L3Q8TE67 593 aaKnown RBP11.77□□□□□ -0.53
VTN-202ENST00000539746 DYDC1Q8WWB3 177 aa11.77□□□□□ -0.53
VTN-202ENST00000539746 ASB12Q8WXK4 309 aa11.77□□□□□ -0.53
VTN-202ENST00000539746 SORCS1Q8WY21 1168 aa11.77□□□□□ -0.53
VTN-202ENST00000539746 CHFRQ96EP1 664 aa11.77□□□□□ -0.53
VTN-202ENST00000539746 SIPA1Q96FS4 1042 aa11.77□□□□□ -0.53
VTN-202ENST00000539746 FAM126AQ9BYI3 521 aaPredicted RBP11.77□□□□□ -0.53
VTN-202ENST00000539746 PCED1AQ9H1Q7 454 aa11.77□□□□□ -0.53
VTN-202ENST00000539746 HEBP1Q9NRV9 189 aa11.77□□□□□ -0.53
VTN-202ENST00000539746 SMOXQ9NWM0 555 aa11.77□□□□□ -0.53
VTN-202ENST00000539746 TAS2R13Q9NYV9 303 aa11.77□□□□□ -0.53
VTN-202ENST00000539746 GRID1Q9ULK0 1009 aa11.77□□□□□ -0.53
VTN-202ENST00000539746 TMCO1Q9UM00 188 aa11.77□□□□□ -0.53
VTN-202ENST00000539746 NOVA2Q9UNW9 492 aaKnown RBP11.77□□□□□ -0.53
VTN-202ENST00000539746 ARL5AQ9Y689 179 aa11.77□□□□□ -0.53
VTN-202ENST00000539746 TNRC18O15417 2968 aaPredicted RBP11.77□□□□□ -0.53
VTN-202ENST00000539746 FAM47DPA6NHR8 397 aa11.76□□□□□ -0.53
VTN-202ENST00000539746 E5RI56 91 aa11.76□□□□□ -0.53
VTN-202ENST00000539746 K7EQS6 105 aa11.76□□□□□ -0.53
VTN-202ENST00000539746 EIF3FO00303 357 aaPredicted RBP11.76□□□□□ -0.53
VTN-202ENST00000539746 LZTS3O60299 673 aaPredicted RBP11.76□□□□□ -0.53
VTN-202ENST00000539746 H2AFYO75367 372 aaKnown RBP11.76□□□□□ -0.53
VTN-202ENST00000539746 SRP72O76094 671 aaKnown RBP11.76□□□□□ -0.53
VTN-202ENST00000539746 PRAMEF1O95521 474 aa11.76□□□□□ -0.53
VTN-202ENST00000539746 KLF8O95600 359 aaPredicted RBP11.76□□□□□ -0.53
VTN-202ENST00000539746 SHBGP04278 402 aa11.76□□□□□ -0.53
VTN-202ENST00000539746 BRAFP15056 766 aa11.76□□□□□ -0.53
VTN-202ENST00000539746 TEAD1P28347 426 aa11.76□□□□□ -0.53
VTN-202ENST00000539746 OAS2P29728 719 aaKnown RBP11.76□□□□□ -0.53
VTN-202ENST00000539746 MC4RP32245 332 aa11.76□□□□□ -0.53
VTN-202ENST00000539746 PSMD8P48556 350 aa11.76□□□□□ -0.53
VTN-202ENST00000539746 SPINT3P49223 89 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms