RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 CST6Q15828 149 aa16.15■□□□□ 0.18
TRAF3-204ENST00000539721 HSF5Q4G112 596 aaPredicted RBP16.15■□□□□ 0.18
TRAF3-204ENST00000539721 EOGTQ5NDL2 527 aa16.15■□□□□ 0.18
TRAF3-204ENST00000539721 AFTPHQ6ULP2 937 aa16.15■□□□□ 0.18
TRAF3-204ENST00000539721 ERN2Q76MJ5 926 aaKnown RBP16.15■□□□□ 0.18
TRAF3-204ENST00000539721 DPPA4Q7L190 304 aa16.15■□□□□ 0.18
TRAF3-204ENST00000539721 STRA8Q7Z7C7 330 aa16.15■□□□□ 0.18
TRAF3-204ENST00000539721 OR4L1Q8NH43 312 aa16.15■□□□□ 0.18
TRAF3-204ENST00000539721 CATSPERZQ9NTU4 200 aa16.15■□□□□ 0.18
TRAF3-204ENST00000539721 WNT16Q9UBV4 365 aa16.15■□□□□ 0.18
TRAF3-204ENST00000539721 HMGB1P1B2RPK0 211 aaPredicted RBP16.14■□□□□ 0.17
TRAF3-204ENST00000539721 MID1O15344 667 aa16.14■□□□□ 0.17
TRAF3-204ENST00000539721 KRT38O76015 456 aa16.14■□□□□ 0.17
TRAF3-204ENST00000539721 F7P08709 466 aaPredicted RBP16.14■□□□□ 0.17
TRAF3-204ENST00000539721 ADRB3P13945 408 aa16.14■□□□□ 0.17
TRAF3-204ENST00000539721 KRT15P19012 456 aa16.14■□□□□ 0.17
TRAF3-204ENST00000539721 MC4RP32245 332 aa16.14■□□□□ 0.17
TRAF3-204ENST00000539721 MMP12P39900 470 aa16.14■□□□□ 0.17
TRAF3-204ENST00000539721 SLC1A2P43004 574 aa16.14■□□□□ 0.17
TRAF3-204ENST00000539721 SUOXP51687 545 aa16.14■□□□□ 0.17
TRAF3-204ENST00000539721 COPAP53621 1224 aa16.14■□□□□ 0.17
TRAF3-204ENST00000539721 PTSQ03393 145 aa16.14■□□□□ 0.17
TRAF3-204ENST00000539721 ELP6Q0PNE2 266 aa16.14■□□□□ 0.17
TRAF3-204ENST00000539721 CTBP1Q13363 440 aa16.14■□□□□ 0.17
TRAF3-204ENST00000539721 LGSNQ5TDP6 509 aa16.14■□□□□ 0.17
TRAF3-204ENST00000539721 TAOK1Q7L7X3 1001 aa16.14■□□□□ 0.17
TRAF3-204ENST00000539721 DENND6AQ8IWF6 608 aa16.14■□□□□ 0.17
TRAF3-204ENST00000539721 LMNTD2Q8IXW0 634 aa16.14■□□□□ 0.17
TRAF3-204ENST00000539721 C19orf43Q9BQ61 176 aa16.14■□□□□ 0.17
TRAF3-204ENST00000539721 HDAC8Q9BY41 377 aa16.14■□□□□ 0.17
TRAF3-204ENST00000539721 MRPS17Q9Y2R5 130 aaKnown RBP16.14■□□□□ 0.17
TRAF3-204ENST00000539721 A0A1W2PQF6 199 aa16.13■□□□□ 0.17
TRAF3-204ENST00000539721 H7C0S8 307 aa16.13■□□□□ 0.17
TRAF3-204ENST00000539721 CD3EAPO15446 510 aaKnown RBP16.13■□□□□ 0.17
TRAF3-204ENST00000539721 KRT37O76014 449 aa16.13■□□□□ 0.17
TRAF3-204ENST00000539721 C1SP09871 688 aa16.13■□□□□ 0.17
TRAF3-204ENST00000539721 C5AR1P21730 350 aa16.13■□□□□ 0.17
TRAF3-204ENST00000539721 OAS2P29728 719 aaKnown RBP16.13■□□□□ 0.17
TRAF3-204ENST00000539721 RPS14P62263 151 aaKnown RBP16.13■□□□□ 0.17
TRAF3-204ENST00000539721 CNTN1Q12860 1018 aa16.13■□□□□ 0.17
TRAF3-204ENST00000539721 FASTKD1Q53R41 847 aaKnown RBP16.13■□□□□ 0.17
TRAF3-204ENST00000539721 GRTP1Q5TC63 336 aa16.13■□□□□ 0.17
TRAF3-204ENST00000539721 MRNIPQ6NTE8 343 aa16.13■□□□□ 0.17
TRAF3-204ENST00000539721 C2CD4AQ8NCU7 369 aaPredicted RBP16.13■□□□□ 0.17
TRAF3-204ENST00000539721 TLCD1Q96CP7 247 aa16.13■□□□□ 0.17
TRAF3-204ENST00000539721 SHDQ96IW2 340 aa16.13■□□□□ 0.17
TRAF3-204ENST00000539721 PKD2L2Q9NZM6 624 aa16.13■□□□□ 0.17
TRAF3-204ENST00000539721 FBXO5Q9UKT4 447 aa16.13■□□□□ 0.17
TRAF3-204ENST00000539721 MMP17Q9ULZ9 603 aa16.13■□□□□ 0.17
TRAF3-204ENST00000539721 ITM2BQ9Y287 266 aa16.13■□□□□ 0.17
TRAF3-204ENST00000539721 KRBA1A5PL33 1030 aa16.13■□□□□ 0.17
TRAF3-204ENST00000539721 BPIP17213 487 aa16.13■□□□□ 0.17
TRAF3-204ENST00000539721 SPRP35270 261 aaPredicted RBP16.13■□□□□ 0.17
TRAF3-204ENST00000539721 SPAM1P38567 509 aa16.13■□□□□ 0.17
TRAF3-204ENST00000539721 P2RY2P41231 377 aa16.13■□□□□ 0.17
TRAF3-204ENST00000539721 STC1P52823 247 aa16.13■□□□□ 0.17
TRAF3-204ENST00000539721 CSE1LP55060 971 aaKnown RBP16.13■□□□□ 0.17
TRAF3-204ENST00000539721 MPP1Q00013 466 aa16.13■□□□□ 0.17
TRAF3-204ENST00000539721 RALGDSQ12967 914 aa16.13■□□□□ 0.17
TRAF3-204ENST00000539721 PEX6Q13608 980 aa16.13■□□□□ 0.17
TRAF3-204ENST00000539721 BMPR2Q13873 1038 aa16.13■□□□□ 0.17
TRAF3-204ENST00000539721 LRRC32Q14392 662 aa16.13■□□□□ 0.17
TRAF3-204ENST00000539721 ZRANB3Q5FWF4 1079 aa16.13■□□□□ 0.17
TRAF3-204ENST00000539721 TNFAIP8L3Q5GJ75 292 aa16.13■□□□□ 0.17
TRAF3-204ENST00000539721 KIAA0408Q6ZU52 694 aa16.13■□□□□ 0.17
TRAF3-204ENST00000539721 CBARPQ8N350 705 aaPredicted RBP16.13■□□□□ 0.17
TRAF3-204ENST00000539721 RBBP8Q99708 897 aa16.13■□□□□ 0.17
TRAF3-204ENST00000539721 MARCH4Q9P2E8 410 aaPredicted RBP16.13■□□□□ 0.17
TRAF3-204ENST00000539721 SLC30A1Q9Y6M5 507 aa16.13■□□□□ 0.17
TRAF3-204ENST00000539721 FOXO6A8MYZ6 492 aa16.12■□□□□ 0.17
TRAF3-204ENST00000539721 TRIM49D1C9J1S8 452 aa16.12■□□□□ 0.17
TRAF3-204ENST00000539721 DNTTP04053 509 aa16.12■□□□□ 0.17
TRAF3-204ENST00000539721 SNRPAP09012 282 aaKnown RBP16.12■□□□□ 0.17
TRAF3-204ENST00000539721 ELFN1P0C7U0 828 aa16.12■□□□□ 0.17
TRAF3-204ENST00000539721 CHRNB1P11230 501 aa16.12■□□□□ 0.17
TRAF3-204ENST00000539721 CNTFP26441 200 aa16.12■□□□□ 0.17
TRAF3-204ENST00000539721 TARSP26639 723 aaKnown RBP16.12■□□□□ 0.17
TRAF3-204ENST00000539721 FOXN2P32314 431 aa16.12■□□□□ 0.17
TRAF3-204ENST00000539721 DRD3P35462 400 aa16.12■□□□□ 0.17
TRAF3-204ENST00000539721 MAGOHP61326 146 aaKnown RBP16.12■□□□□ 0.17
TRAF3-204ENST00000539721 XIAPP98170 497 aa16.12■□□□□ 0.17
TRAF3-204ENST00000539721 UBXN2BQ14CS0 331 aa16.12■□□□□ 0.17
TRAF3-204ENST00000539721 FAM151BQ6UXP7 276 aa16.12■□□□□ 0.17
TRAF3-204ENST00000539721 SDCCAG8Q86SQ7 713 aaPredicted RBP16.12■□□□□ 0.17
TRAF3-204ENST00000539721 TMPRSS6Q8IU80 811 aa16.12■□□□□ 0.17
TRAF3-204ENST00000539721 CILP2Q8IUL8 1156 aa16.12■□□□□ 0.17
TRAF3-204ENST00000539721 UBALD2Q8IYN6 164 aa16.12■□□□□ 0.17
TRAF3-204ENST00000539721 AADATQ8N5Z0 425 aa16.12■□□□□ 0.17
TRAF3-204ENST00000539721 GPR150Q8NGU9 434 aa16.12■□□□□ 0.17
TRAF3-204ENST00000539721 ATXN2LQ8WWM7 1075 aaKnown RBP16.12■□□□□ 0.17
TRAF3-204ENST00000539721 RAB7BQ96AH8 199 aa16.12■□□□□ 0.17
TRAF3-204ENST00000539721 ATXN7L3BQ96GX2 97 aa16.12■□□□□ 0.17
TRAF3-204ENST00000539721 MKRN2Q9H000 416 aaKnown RBP16.12■□□□□ 0.17
TRAF3-204ENST00000539721 FBXO6Q9NRD1 293 aaPredicted RBP16.12■□□□□ 0.17
TRAF3-204ENST00000539721 APPL1Q9UKG1 709 aa16.12■□□□□ 0.17
TRAF3-204ENST00000539721 GLYATL1P3A0A0U1RQE8 302 aa16.11■□□□□ 0.17
TRAF3-204ENST00000539721 GOLGA8CPA6NN73 597 aa16.11■□□□□ 0.17
TRAF3-204ENST00000539721 NEMP1O14524 444 aa16.11■□□□□ 0.17
TRAF3-204ENST00000539721 AREL1O15033 823 aa16.11■□□□□ 0.17
TRAF3-204ENST00000539721 SPINT1O43278 529 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms