RNA–Protein interactions for RNA: ENST00000539194.5

PROM1-219, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-219ENST00000539194 RBM22Q9NW64 420 aaKnown RBP eCLIP6.94□□□□□ -1.3
PROM1-219ENST00000539194 TUBA8Q9NY65 449 aaPredicted RBP6.94□□□□□ -1.3
PROM1-219ENST00000539194 GTSE1Q9NYZ3 720 aa6.94□□□□□ -1.3
PROM1-219ENST00000539194 MPP6Q9NZW5 540 aa6.94□□□□□ -1.3
PROM1-219ENST00000539194 DSEQ9UL01 958 aa6.94□□□□□ -1.3
PROM1-219ENST00000539194 CCL27Q9Y4X3 112 aa6.94□□□□□ -1.3
PROM1-219ENST00000539194 CCDC78A2IDD5 438 aa6.94□□□□□ -1.3
PROM1-219ENST00000539194 GLTPD2A6NH11 291 aa6.94□□□□□ -1.3
PROM1-219ENST00000539194 CASTOR2A6NHX0 329 aa6.94□□□□□ -1.3
PROM1-219ENST00000539194 AQP12BA6NM10 295 aa6.94□□□□□ -1.3
PROM1-219ENST00000539194 DFFAO00273 331 aa6.94□□□□□ -1.3
PROM1-219ENST00000539194 ANKRD28O15084 1053 aa6.94□□□□□ -1.3
PROM1-219ENST00000539194 ADAMTS4O75173 837 aa6.94□□□□□ -1.3
PROM1-219ENST00000539194 PRLP01236 227 aa6.94□□□□□ -1.3
PROM1-219ENST00000539194 ENO3P13929 434 aaPredicted RBP6.94□□□□□ -1.3
PROM1-219ENST00000539194 STX5Q13190 355 aa6.94□□□□□ -1.3
PROM1-219ENST00000539194 SERINC3Q13530 473 aa6.94□□□□□ -1.3
PROM1-219ENST00000539194 CSHL1Q14406 222 aa6.94□□□□□ -1.3
PROM1-219ENST00000539194 GRB7Q14451 532 aa6.94□□□□□ -1.3
PROM1-219ENST00000539194 FAM83EQ2M2I3 478 aa6.94□□□□□ -1.3
PROM1-219ENST00000539194 KCTD21Q4G0X4 260 aa6.94□□□□□ -1.3
PROM1-219ENST00000539194 PYCR3Q53H96 274 aa6.94□□□□□ -1.3
PROM1-219ENST00000539194 GPR158Q5T848 1215 aa6.94□□□□□ -1.3
PROM1-219ENST00000539194 AGAP9Q5VTM2 703 aa6.94□□□□□ -1.3
PROM1-219ENST00000539194 B3GNT6Q6ZMB0 384 aa6.94□□□□□ -1.3
PROM1-219ENST00000539194 AQP12AQ8IXF9 295 aa6.94□□□□□ -1.3
PROM1-219ENST00000539194 PLPP6Q8IY26 295 aa6.94□□□□□ -1.3
PROM1-219ENST00000539194 PDPRQ8NCN5 879 aa6.94□□□□□ -1.3
PROM1-219ENST00000539194 HM13Q8TCT9 377 aa6.94□□□□□ -1.3
PROM1-219ENST00000539194 SREK1Q8WXA9 508 aaKnown RBP6.94□□□□□ -1.3
PROM1-219ENST00000539194 TMEM125Q96AQ2 219 aa6.94□□□□□ -1.3
PROM1-219ENST00000539194 TMIGD2Q96BF3 282 aa6.94□□□□□ -1.3
PROM1-219ENST00000539194 FEM1CQ96JP0 617 aa6.94□□□□□ -1.3
PROM1-219ENST00000539194 UROC1Q96N76 676 aa6.94□□□□□ -1.3
PROM1-219ENST00000539194 SLC25A23Q9BV35 468 aa6.94□□□□□ -1.3
PROM1-219ENST00000539194 ATXN10Q9UBB4 475 aa6.94□□□□□ -1.3
PROM1-219ENST00000539194 TMCO1Q9UM00 188 aa6.94□□□□□ -1.3
PROM1-219ENST00000539194 A0A1W2PQH9 124 aa6.93□□□□□ -1.3
PROM1-219ENST00000539194 E9PQ18 207 aa6.93□□□□□ -1.3
PROM1-219ENST00000539194 UBDO15205 165 aa6.93□□□□□ -1.3
PROM1-219ENST00000539194 HOXB9P17482 250 aaPredicted RBP6.93□□□□□ -1.3
PROM1-219ENST00000539194 CDK9P50750 372 aaKnown RBP6.93□□□□□ -1.3
PROM1-219ENST00000539194 RALGDSQ12967 914 aa6.93□□□□□ -1.3
PROM1-219ENST00000539194 LPIN1Q14693 890 aa6.93□□□□□ -1.3
PROM1-219ENST00000539194 GRAMD1BQ3KR37 738 aa6.93□□□□□ -1.3
PROM1-219ENST00000539194 CLEC6AQ6EIG7 209 aa6.93□□□□□ -1.3
PROM1-219ENST00000539194 RNF165Q6ZSG1 346 aa6.93□□□□□ -1.3
PROM1-219ENST00000539194 PCDH20Q8N6Y1 951 aaKnown RBP6.93□□□□□ -1.3
PROM1-219ENST00000539194 KLHDC9Q8NEP7 349 aa6.93□□□□□ -1.3
PROM1-219ENST00000539194 OR52K2Q8NGK3 314 aa6.93□□□□□ -1.3
PROM1-219ENST00000539194 LINC01599Q8WXQ3 324 aa6.93□□□□□ -1.3
PROM1-219ENST00000539194 MRPL1Q9BYD6 325 aaKnown RBP6.93□□□□□ -1.3
PROM1-219ENST00000539194 UNKQ9C0B0 810 aaKnown RBP6.93□□□□□ -1.3
PROM1-219ENST00000539194 ACTL8Q9H568 366 aa6.93□□□□□ -1.3
PROM1-219ENST00000539194 PCDHB8Q9UN66 801 aa6.93□□□□□ -1.3
PROM1-219ENST00000539194 KCTD3Q9Y597 815 aa6.93□□□□□ -1.3
PROM1-219ENST00000539194 PTGDR2Q9Y5Y4 395 aa6.93□□□□□ -1.3
PROM1-219ENST00000539194 SQORQ9Y6N5 450 aa6.93□□□□□ -1.3
PROM1-219ENST00000539194 H3BSA7 217 aa6.93□□□□□ -1.3
PROM1-219ENST00000539194 DUSP11O75319 330 aaKnown RBP6.93□□□□□ -1.3
PROM1-219ENST00000539194 HOXD9P28356 352 aaPredicted RBP6.93□□□□□ -1.3
PROM1-219ENST00000539194 OXTRP30559 389 aa6.93□□□□□ -1.3
PROM1-219ENST00000539194 FAM189BP81408 668 aa6.93□□□□□ -1.3
PROM1-219ENST00000539194 DSC2Q02487 901 aa6.93□□□□□ -1.3
PROM1-219ENST00000539194 TUSC3Q13454 348 aa6.93□□□□□ -1.3
PROM1-219ENST00000539194 OR2T34Q8NGX1 318 aa6.93□□□□□ -1.3
PROM1-219ENST00000539194 OR2T3Q8NH03 318 aa6.93□□□□□ -1.3
PROM1-219ENST00000539194 CALML6Q8TD86 181 aa6.93□□□□□ -1.3
PROM1-219ENST00000539194 LRGUKQ96M69 825 aa6.93□□□□□ -1.3
PROM1-219ENST00000539194 MGME1Q9BQP7 344 aa6.93□□□□□ -1.3
PROM1-219ENST00000539194 TFB2MQ9H5Q4 396 aaKnown RBP6.93□□□□□ -1.3
PROM1-219ENST00000539194 EML4Q9HC35 981 aaKnown RBP6.93□□□□□ -1.3
PROM1-219ENST00000539194 ACTR3BQ9P1U1 418 aa6.93□□□□□ -1.3
PROM1-219ENST00000539194 POLG2Q9UHN1 485 aa6.93□□□□□ -1.3
PROM1-219ENST00000539194 PTBP2Q9UKA9 531 aaKnown RBP6.93□□□□□ -1.3
PROM1-219ENST00000539194 LRRC14BA6NHZ5 514 aa6.93□□□□□ -1.3
PROM1-219ENST00000539194 GNAO1P09471 354 aa6.93□□□□□ -1.3
PROM1-219ENST00000539194 PAMP19021 973 aa6.93□□□□□ -1.3
PROM1-219ENST00000539194 APLP1P51693 650 aa6.93□□□□□ -1.3
PROM1-219ENST00000539194 STC1P52823 247 aa6.93□□□□□ -1.3
PROM1-219ENST00000539194 IL10RBQ08334 325 aa6.93□□□□□ -1.3
PROM1-219ENST00000539194 AMIGO2Q86SJ2 522 aa6.93□□□□□ -1.3
PROM1-219ENST00000539194 KIAA2013Q8IYS2 634 aa6.93□□□□□ -1.3
PROM1-219ENST00000539194 CLYBLQ8N0X4 340 aa6.93□□□□□ -1.3
PROM1-219ENST00000539194 OR2T11Q8NH01 316 aa6.93□□□□□ -1.3
PROM1-219ENST00000539194 DIS3LQ8TF46 1054 aaKnown RBP6.93□□□□□ -1.3
PROM1-219ENST00000539194 DDI1Q8WTU0 396 aa6.93□□□□□ -1.3
PROM1-219ENST00000539194 CANT1Q8WVQ1 401 aa6.93□□□□□ -1.3
PROM1-219ENST00000539194 TANKQ92844 425 aa6.93□□□□□ -1.3
PROM1-219ENST00000539194 PSMG2Q969U7 264 aa6.93□□□□□ -1.3
PROM1-219ENST00000539194 KIAA1191Q96A73 305 aa6.93□□□□□ -1.3
PROM1-219ENST00000539194 DTNBP1Q96EV8 351 aa6.93□□□□□ -1.3
PROM1-219ENST00000539194 CNBD2Q96M20 576 aa6.93□□□□□ -1.3
PROM1-219ENST00000539194 NSUN5Q96P11 429 aaKnown RBP6.93□□□□□ -1.3
PROM1-219ENST00000539194 HOPXQ9BPY8 73 aaPredicted RBP6.93□□□□□ -1.3
PROM1-219ENST00000539194 SLC39A3Q9BRY0 314 aa6.93□□□□□ -1.3
PROM1-219ENST00000539194 AARSD1Q9BTE6 412 aaKnown RBP6.93□□□□□ -1.3
PROM1-219ENST00000539194 DERL2Q9GZP9 239 aa6.93□□□□□ -1.3
PROM1-219ENST00000539194 ATXN3LQ9H3M9 355 aa6.93□□□□□ -1.3
PROM1-219ENST00000539194 NTN4Q9HB63 628 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms