RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 TRAF2Q12933 501 aa8.64□□□□□ -1.03
DDB1-212ENST00000538470 KRT81Q14533 505 aa8.64□□□□□ -1.03
DDB1-212ENST00000538470 IQCB1Q15051 598 aa8.64□□□□□ -1.03
DDB1-212ENST00000538470 TCEA2Q15560 299 aa8.64□□□□□ -1.03
DDB1-212ENST00000538470 NFKBIBQ15653 356 aa8.64□□□□□ -1.03
DDB1-212ENST00000538470 ZSCAN23Q3MJ62 389 aa8.64□□□□□ -1.03
DDB1-212ENST00000538470 MAP9Q49MG5 647 aa8.64□□□□□ -1.03
DDB1-212ENST00000538470 CCDC81Q6ZN84 652 aa8.64□□□□□ -1.03
DDB1-212ENST00000538470 NYAP1Q6ZVC0 841 aa8.64□□□□□ -1.03
DDB1-212ENST00000538470 ZNF765Q7L2R6 523 aa8.64□□□□□ -1.03
DDB1-212ENST00000538470 C17orf82Q86X59 251 aaPredicted RBP8.64□□□□□ -1.03
DDB1-212ENST00000538470 SLITRK4Q8IW52 837 aa8.64□□□□□ -1.03
DDB1-212ENST00000538470 TP53INP2Q8IXH6 220 aa8.64□□□□□ -1.03
DDB1-212ENST00000538470 RAVER1Q8IY67 606 aaKnown RBP8.64□□□□□ -1.03
DDB1-212ENST00000538470 PELI3Q8N2H9 469 aa8.64□□□□□ -1.03
DDB1-212ENST00000538470 PGBD5Q8N414 524 aa8.64□□□□□ -1.03
DDB1-212ENST00000538470 TEX26Q8N6G2 289 aa8.64□□□□□ -1.03
DDB1-212ENST00000538470 FAM46DQ8NEK8 389 aa8.64□□□□□ -1.03
DDB1-212ENST00000538470 NSMCE3Q96MG7 304 aa8.64□□□□□ -1.03
DDB1-212ENST00000538470 NAP1L5Q96NT1 182 aaPredicted RBP8.64□□□□□ -1.03
DDB1-212ENST00000538470 CCNL2Q96S94 520 aaPredicted RBP8.64□□□□□ -1.03
DDB1-212ENST00000538470 CMKLR1Q99788 373 aa8.64□□□□□ -1.03
DDB1-212ENST00000538470 ZNF670Q9BS34 389 aa8.64□□□□□ -1.03
DDB1-212ENST00000538470 FUCA2Q9BTY2 467 aa8.64□□□□□ -1.03
DDB1-212ENST00000538470 NUP85Q9BW27 656 aa8.64□□□□□ -1.03
DDB1-212ENST00000538470 LGR4Q9BXB1 951 aa8.64□□□□□ -1.03
DDB1-212ENST00000538470 FOXP3Q9BZS1 431 aa8.64□□□□□ -1.03
DDB1-212ENST00000538470 POLR1EQ9GZS1 481 aaKnown RBP8.64□□□□□ -1.03
DDB1-212ENST00000538470 THAP2Q9H0W7 228 aa8.64□□□□□ -1.03
DDB1-212ENST00000538470 CDH19Q9H159 772 aa8.64□□□□□ -1.03
DDB1-212ENST00000538470 DPEP2Q9H4A9 486 aa8.64□□□□□ -1.03
DDB1-212ENST00000538470 NOD2Q9HC29 1040 aa8.64□□□□□ -1.03
DDB1-212ENST00000538470 MRPL40Q9NQ50 206 aaKnown RBP8.64□□□□□ -1.03
DDB1-212ENST00000538470 AKAP7Q9P0M2 348 aaPredicted RBP8.64□□□□□ -1.03
DDB1-212ENST00000538470 LRIT1Q9P2V4 623 aa8.64□□□□□ -1.03
DDB1-212ENST00000538470 MOSPD1Q9UJG1 213 aa8.64□□□□□ -1.03
DDB1-212ENST00000538470 LOXL2Q9Y4K0 774 aa8.64□□□□□ -1.03
DDB1-212ENST00000538470 PCDHGC4Q9Y5F7 938 aa8.64□□□□□ -1.03
DDB1-212ENST00000538470 RNF215Q9Y6U7 377 aa8.64□□□□□ -1.03
DDB1-212ENST00000538470 PIEZO2Q9H5I5 2752 aa8.64□□□□□ -1.03
DDB1-212ENST00000538470 SDK2Q58EX2 2172 aa8.63□□□□□ -1.03
DDB1-212ENST00000538470 HGSO14964 777 aaPredicted RBP8.63□□□□□ -1.03
DDB1-212ENST00000538470 CASC3O15234 703 aaKnown RBP8.63□□□□□ -1.03
DDB1-212ENST00000538470 MFSD11O43934 449 aa8.63□□□□□ -1.03
DDB1-212ENST00000538470 FZD6O60353 706 aa8.63□□□□□ -1.03
DDB1-212ENST00000538470 CPNE6O95741 557 aa8.63□□□□□ -1.03
DDB1-212ENST00000538470 CEACAM5P06731 702 aa8.63□□□□□ -1.03
DDB1-212ENST00000538470 PLA2G2AP14555 144 aa8.63□□□□□ -1.03
DDB1-212ENST00000538470 CES1P23141 567 aa8.63□□□□□ -1.03
DDB1-212ENST00000538470 SLC5A2P31639 672 aa8.63□□□□□ -1.03
DDB1-212ENST00000538470 ETV3P41162 512 aa8.63□□□□□ -1.03
DDB1-212ENST00000538470 GARSP41250 739 aaKnown RBP8.63□□□□□ -1.03
DDB1-212ENST00000538470 GPR3P46089 330 aa8.63□□□□□ -1.03
DDB1-212ENST00000538470 GALNT2Q10471 571 aa8.63□□□□□ -1.03
DDB1-212ENST00000538470 TRA2AQ13595 282 aaKnown RBP eCLIP8.63□□□□□ -1.03
DDB1-212ENST00000538470 SKOR2Q2VWA4 1001 aaPredicted RBP8.63□□□□□ -1.03
DDB1-212ENST00000538470 XKR5Q6UX68 686 aa8.63□□□□□ -1.03
DDB1-212ENST00000538470 ADAMTSL4Q6UY14 1074 aa8.63□□□□□ -1.03
DDB1-212ENST00000538470 HSD11B1LQ7Z5J1 315 aa8.63□□□□□ -1.03
DDB1-212ENST00000538470 ZNF605Q86T29 641 aa8.63□□□□□ -1.03
DDB1-212ENST00000538470 JAMLQ86YT9 394 aa8.63□□□□□ -1.03
DDB1-212ENST00000538470 CBARPQ8N350 705 aaPredicted RBP8.63□□□□□ -1.03
DDB1-212ENST00000538470 Q8N9G6 341 aaPredicted RBP8.63□□□□□ -1.03
DDB1-212ENST00000538470 ZNF564Q8TBZ8 553 aaPredicted RBP8.63□□□□□ -1.03
DDB1-212ENST00000538470 ZDHHC1Q8WTX9 485 aa8.63□□□□□ -1.03
DDB1-212ENST00000538470 MAML1Q92585 1016 aa8.63□□□□□ -1.03
DDB1-212ENST00000538470 SCARF2Q96GP6 870 aaPredicted RBP8.63□□□□□ -1.03
DDB1-212ENST00000538470 OR2M4Q96R27 311 aa8.63□□□□□ -1.03
DDB1-212ENST00000538470 DPYSL5Q9BPU6 564 aa8.63□□□□□ -1.03
DDB1-212ENST00000538470 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.63□□□□□ -1.03
DDB1-212ENST00000538470 NT5MQ9NPB1 228 aa8.63□□□□□ -1.03
DDB1-212ENST00000538470 PISDQ9UG56 409 aa8.63□□□□□ -1.03
DDB1-212ENST00000538470 SUFUQ9UMX1 484 aa8.63□□□□□ -1.03
DDB1-212ENST00000538470 SLC17A4Q9Y2C5 497 aa8.63□□□□□ -1.03
DDB1-212ENST00000538470 TLN1Q9Y490 2541 aaKnown RBP8.63□□□□□ -1.03
DDB1-212ENST00000538470 FLNBO75369 2602 aaKnown RBP8.63□□□□□ -1.03
DDB1-212ENST00000538470 A0A0J9YYE9 177 aa8.62□□□□□ -1.03
DDB1-212ENST00000538470 GOLGA6CA6NDK9 693 aa8.62□□□□□ -1.03
DDB1-212ENST00000538470 GOLGA6BA6NDN3 693 aa8.62□□□□□ -1.03
DDB1-212ENST00000538470 RHPN2P1A8MT19 583 aa8.62□□□□□ -1.03
DDB1-212ENST00000538470 A8MX80 341 aa8.62□□□□□ -1.03
DDB1-212ENST00000538470 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.62□□□□□ -1.03
DDB1-212ENST00000538470 MYO1FO00160 1098 aa8.62□□□□□ -1.03
DDB1-212ENST00000538470 SOD1P00441 154 aa8.62□□□□□ -1.03
DDB1-212ENST00000538470 TRBC1P01850 177 aa8.62□□□□□ -1.03
DDB1-212ENST00000538470 GOLGA6DP0CG33 693 aa8.62□□□□□ -1.03
DDB1-212ENST00000538470 HGFP14210 728 aa8.62□□□□□ -1.03
DDB1-212ENST00000538470 MX2P20592 715 aa8.62□□□□□ -1.03
DDB1-212ENST00000538470 MAN1A1P33908 653 aa8.62□□□□□ -1.03
DDB1-212ENST00000538470 GPR1P46091 355 aa8.62□□□□□ -1.03
DDB1-212ENST00000538470 GNPDA1P46926 289 aa8.62□□□□□ -1.03
DDB1-212ENST00000538470 EPHB1P54762 984 aa8.62□□□□□ -1.03
DDB1-212ENST00000538470 MAZP56270 477 aaKnown RBP8.62□□□□□ -1.03
DDB1-212ENST00000538470 UBASH3AP57075 661 aa8.62□□□□□ -1.03
DDB1-212ENST00000538470 MAXP61244 160 aa8.62□□□□□ -1.03
DDB1-212ENST00000538470 RPL26P61254 145 aaKnown RBP8.62□□□□□ -1.03
DDB1-212ENST00000538470 FANCCQ00597 558 aa8.62□□□□□ -1.03
DDB1-212ENST00000538470 B4GALNT1Q00973 533 aa8.62□□□□□ -1.03
DDB1-212ENST00000538470 LRP8Q14114 963 aa8.62□□□□□ -1.03
DDB1-212ENST00000538470 DPYSL3Q14195 570 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms