RNA–Protein interactions for RNA: ENST00000537877.5

DDB1-209, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-209ENST00000537877 LHCGRP22888 699 aa12.33□□□□□ -0.44
DDB1-209ENST00000537877 FOXN2P32314 431 aa12.33□□□□□ -0.44
DDB1-209ENST00000537877 MMP12P39900 470 aa12.33□□□□□ -0.44
DDB1-209ENST00000537877 WASP42768 502 aa12.33□□□□□ -0.44
DDB1-209ENST00000537877 CD151P48509 253 aa12.33□□□□□ -0.44
DDB1-209ENST00000537877 PSMD8P48556 350 aa12.33□□□□□ -0.44
DDB1-209ENST00000537877 NEK3P51956 506 aa12.33□□□□□ -0.44
DDB1-209ENST00000537877 STC1P52823 247 aa12.33□□□□□ -0.44
DDB1-209ENST00000537877 PRKCQQ04759 706 aa12.33□□□□□ -0.44
DDB1-209ENST00000537877 CCINQ13939 588 aa12.33□□□□□ -0.44
DDB1-209ENST00000537877 PTPRCAPQ14761 206 aa12.33□□□□□ -0.44
DDB1-209ENST00000537877 PTPRRQ15256 657 aa12.33□□□□□ -0.44
DDB1-209ENST00000537877 TYSND1Q2T9J0 566 aa12.33□□□□□ -0.44
DDB1-209ENST00000537877 FASTKD1Q53R41 847 aaKnown RBP12.33□□□□□ -0.44
DDB1-209ENST00000537877 AARS2Q5JTZ9 985 aaKnown RBP12.33□□□□□ -0.44
DDB1-209ENST00000537877 ZNF776Q68DI1 518 aaPredicted RBP12.33□□□□□ -0.44
DDB1-209ENST00000537877 TIFABQ6ZNK6 161 aa12.33□□□□□ -0.44
DDB1-209ENST00000537877 PTAR1Q7Z6K3 402 aaPredicted RBP12.33□□□□□ -0.44
DDB1-209ENST00000537877 TTC7BQ86TV6 843 aa12.33□□□□□ -0.44
DDB1-209ENST00000537877 TSPAN33Q86UF1 283 aa12.33□□□□□ -0.44
DDB1-209ENST00000537877 EXOC3L1Q86VI1 746 aa12.33□□□□□ -0.44
DDB1-209ENST00000537877 CILP2Q8IUL8 1156 aa12.33□□□□□ -0.44
DDB1-209ENST00000537877 DENND6AQ8IWF6 608 aa12.33□□□□□ -0.44
DDB1-209ENST00000537877 RAVER1Q8IY67 606 aaKnown RBP12.33□□□□□ -0.44
DDB1-209ENST00000537877 SRRM1Q8IYB3 904 aaKnown RBP12.33□□□□□ -0.44
DDB1-209ENST00000537877 ARFGAP2Q8N6H7 521 aa12.33□□□□□ -0.44
DDB1-209ENST00000537877 OTUD6BQ8N6M0 293 aa12.33□□□□□ -0.44
DDB1-209ENST00000537877 OR2T3Q8NH03 318 aa12.33□□□□□ -0.44
DDB1-209ENST00000537877 FAM76AQ8TAV0 307 aa12.33□□□□□ -0.44
DDB1-209ENST00000537877 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.33□□□□□ -0.441e-9■■■■■ 31.4
DDB1-209ENST00000537877 RAB7BQ96AH8 199 aa12.33□□□□□ -0.44
DDB1-209ENST00000537877 ARRDC3Q96B67 414 aa12.33□□□□□ -0.44
DDB1-209ENST00000537877 EID2BQ96D98 161 aa12.33□□□□□ -0.44
DDB1-209ENST00000537877 MCMBPQ9BTE3 642 aa12.33□□□□□ -0.44
DDB1-209ENST00000537877 HDAC8Q9BY41 377 aa12.33□□□□□ -0.44
DDB1-209ENST00000537877 RAD18Q9NS91 495 aa12.33□□□□□ -0.44
DDB1-209ENST00000537877 PKD2L2Q9NZM6 624 aa12.33□□□□□ -0.44
DDB1-209ENST00000537877 NFKBIL1Q9UBC1 381 aaPredicted RBP12.33□□□□□ -0.44
DDB1-209ENST00000537877 APPL1Q9UKG1 709 aa12.33□□□□□ -0.44
DDB1-209ENST00000537877 CORO1CQ9ULV4 474 aaPredicted RBP12.33□□□□□ -0.44
DDB1-209ENST00000537877 SZT2Q5T011 3432 aa12.33□□□□□ -0.44
DDB1-209ENST00000537877 ANTXRLA6NF34 631 aa12.32□□□□□ -0.44
DDB1-209ENST00000537877 SHISA7A6NL88 538 aa12.32□□□□□ -0.44
DDB1-209ENST00000537877 H0Y858 1186 aa12.32□□□□□ -0.44
DDB1-209ENST00000537877 PFDN6O15212 129 aa12.32□□□□□ -0.44
DDB1-209ENST00000537877 CD3EAPO15446 510 aaKnown RBP12.32□□□□□ -0.44
DDB1-209ENST00000537877 MT-ND3P03897 115 aa12.32□□□□□ -0.44
DDB1-209ENST00000537877 ADRB3P13945 408 aa12.32□□□□□ -0.44
DDB1-209ENST00000537877 HOXB2P14652 356 aa12.32□□□□□ -0.44
DDB1-209ENST00000537877 C5AR1P21730 350 aa12.32□□□□□ -0.44
DDB1-209ENST00000537877 MC4RP32245 332 aa12.32□□□□□ -0.44
DDB1-209ENST00000537877 SPAM1P38567 509 aa12.32□□□□□ -0.44
DDB1-209ENST00000537877 LEPRP48357 1165 aaKnown RBP12.32□□□□□ -0.44
DDB1-209ENST00000537877 DCDC1P59894 354 aa12.32□□□□□ -0.44
DDB1-209ENST00000537877 XIAPP98170 497 aa12.32□□□□□ -0.44
DDB1-209ENST00000537877 SATB1Q01826 763 aa12.32□□□□□ -0.44
DDB1-209ENST00000537877 CACNG1Q06432 222 aa12.32□□□□□ -0.44
DDB1-209ENST00000537877 CCDC15Q0P6D6 951 aa12.32□□□□□ -0.44
DDB1-209ENST00000537877 RALGDSQ12967 914 aa12.32□□□□□ -0.44
DDB1-209ENST00000537877 CTBP1Q13363 440 aa12.32□□□□□ -0.44
DDB1-209ENST00000537877 CST6Q15828 149 aa12.32□□□□□ -0.44
DDB1-209ENST00000537877 C2orf27AQ580R0 203 aa12.32□□□□□ -0.44
DDB1-209ENST00000537877 EOGTQ5NDL2 527 aa12.32□□□□□ -0.44
DDB1-209ENST00000537877 IER5LQ5T953 404 aa12.32□□□□□ -0.44
DDB1-209ENST00000537877 RNF187Q5TA31 235 aaPredicted RBP12.32□□□□□ -0.44
DDB1-209ENST00000537877 FBXL19Q6PCT2 694 aa12.32□□□□□ -0.44
DDB1-209ENST00000537877 ZNF852Q6ZMS4 543 aa12.32□□□□□ -0.44
DDB1-209ENST00000537877 ERN2Q76MJ5 926 aaKnown RBP12.32□□□□□ -0.44
DDB1-209ENST00000537877 SDCCAG8Q86SQ7 713 aaPredicted RBP12.32□□□□□ -0.44
DDB1-209ENST00000537877 ZC3HC1Q86WB0 502 aaKnown RBP12.32□□□□□ -0.44
DDB1-209ENST00000537877 MMAAQ8IVH4 418 aaKnown RBP12.32□□□□□ -0.44
DDB1-209ENST00000537877 ISL2Q96A47 359 aa12.32□□□□□ -0.44
DDB1-209ENST00000537877 ALKBH8Q96BT7 664 aaKnown RBP12.32□□□□□ -0.44
DDB1-209ENST00000537877 VPS39Q96JC1 886 aa12.32□□□□□ -0.44
DDB1-209ENST00000537877 PLEKHG4BQ96PX9 1271 aa12.32□□□□□ -0.44
DDB1-209ENST00000537877 SMC6Q96SB8 1091 aa12.32□□□□□ -0.44
DDB1-209ENST00000537877 TCF12Q99081 682 aa12.32□□□□□ -0.44
DDB1-209ENST00000537877 GPR22Q99680 433 aa12.32□□□□□ -0.44
DDB1-209ENST00000537877 CDH19Q9H159 772 aa12.32□□□□□ -0.44
DDB1-209ENST00000537877 SUDS3Q9H7L9 328 aaPredicted RBP12.32□□□□□ -0.44
DDB1-209ENST00000537877 BPIFA1Q9NP55 256 aa12.32□□□□□ -0.44
DDB1-209ENST00000537877 SSU72Q9NP77 194 aaKnown RBP12.32□□□□□ -0.44
DDB1-209ENST00000537877 PRDM6Q9NQX0 595 aa12.32□□□□□ -0.44
DDB1-209ENST00000537877 INTS10Q9NVR2 710 aaKnown RBP12.32□□□□□ -0.44
DDB1-209ENST00000537877 MARCH4Q9P2E8 410 aaPredicted RBP12.32□□□□□ -0.44
DDB1-209ENST00000537877 VPS9D1Q9Y2B5 631 aa12.32□□□□□ -0.44
DDB1-209ENST00000537877 SLC30A1Q9Y6M5 507 aa12.32□□□□□ -0.44
DDB1-209ENST00000537877 GLYATL1P3A0A0U1RQE8 302 aa12.31□□□□□ -0.44
DDB1-209ENST00000537877 A0A0U1RQS6 177 aa12.31□□□□□ -0.44
DDB1-209ENST00000537877 HMX2A2RU54 273 aa12.31□□□□□ -0.44
DDB1-209ENST00000537877 RGSL1A5PLK6 1076 aa12.31□□□□□ -0.44
DDB1-209ENST00000537877 OR51F1A6NGY5 319 aa12.31□□□□□ -0.44
DDB1-209ENST00000537877 C19orf67A6NJJ6 358 aa12.31□□□□□ -0.44
DDB1-209ENST00000537877 AREL1O15033 823 aa12.31□□□□□ -0.44
DDB1-209ENST00000537877 ADAM23O75077 832 aa12.31□□□□□ -0.44
DDB1-209ENST00000537877 AHSGP02765 367 aa12.31□□□□□ -0.44
DDB1-209ENST00000537877 C1SP09871 688 aa12.31□□□□□ -0.44
DDB1-209ENST00000537877 C7P10643 843 aa12.31□□□□□ -0.44
DDB1-209ENST00000537877 BPIP17213 487 aa12.31□□□□□ -0.44
DDB1-209ENST00000537877 ITGALP20701 1170 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms