RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 ZFP28Q8NHY6 868 aa14.32□□□□□ -0.12
USP44-203ENST00000537435 GPR152Q8TDT2 470 aa14.32□□□□□ -0.12
USP44-203ENST00000537435 DDI1Q8WTU0 396 aa14.32□□□□□ -0.12
USP44-203ENST00000537435 PPWD1Q96BP3 646 aaKnown RBP14.32□□□□□ -0.12
USP44-203ENST00000537435 LRCH3Q96II8 777 aa14.32□□□□□ -0.12
USP44-203ENST00000537435 UHRF1Q96T88 793 aaPredicted RBP14.32□□□□□ -0.12
USP44-203ENST00000537435 CIB1Q99828 191 aa14.32□□□□□ -0.12
USP44-203ENST00000537435 EFHD1Q9BUP0 239 aa14.32□□□□□ -0.12
USP44-203ENST00000537435 NOL11Q9H8H0 719 aaKnown RBP14.32□□□□□ -0.12
USP44-203ENST00000537435 HACD3Q9P035 362 aa14.32□□□□□ -0.12
USP44-203ENST00000537435 PIP5K1BO14986 540 aa14.31□□□□□ -0.12
USP44-203ENST00000537435 HMBSP08397 361 aa14.31□□□□□ -0.12
USP44-203ENST00000537435 PIRTP0C851 137 aa14.31□□□□□ -0.12
USP44-203ENST00000537435 ACVRL1P37023 503 aa14.31□□□□□ -0.12
USP44-203ENST00000537435 TXNL4AP83876 142 aaKnown RBP14.31□□□□□ -0.12
USP44-203ENST00000537435 ACVR1Q04771 509 aa14.31□□□□□ -0.12
USP44-203ENST00000537435 TNK2Q07912 1038 aa14.31□□□□□ -0.12
USP44-203ENST00000537435 IL10RBQ08334 325 aa14.31□□□□□ -0.12
USP44-203ENST00000537435 GALNT3Q14435 633 aa14.31□□□□□ -0.12
USP44-203ENST00000537435 PFKFB4Q16877 469 aa14.31□□□□□ -0.12
USP44-203ENST00000537435 MRNIPQ6NTE8 343 aa14.31□□□□□ -0.12
USP44-203ENST00000537435 RAB44Q7Z6P3 723 aaPredicted RBP14.31□□□□□ -0.12
USP44-203ENST00000537435 ZNF280BQ86YH2 543 aa14.31□□□□□ -0.12
USP44-203ENST00000537435 DCP1BQ8IZD4 617 aaKnown RBP14.31□□□□□ -0.12
USP44-203ENST00000537435 MYO1HQ8N1T3 1032 aa14.31□□□□□ -0.12
USP44-203ENST00000537435 TWIST2Q8WVJ9 160 aa14.31□□□□□ -0.12
USP44-203ENST00000537435 CANT1Q8WVQ1 401 aa14.31□□□□□ -0.12
USP44-203ENST00000537435 ROPN1LQ96C74 230 aa14.31□□□□□ -0.12
USP44-203ENST00000537435 NSUN5Q96P11 429 aaKnown RBP14.31□□□□□ -0.12
USP44-203ENST00000537435 RPRD1AQ96P16 312 aaPredicted RBP14.31□□□□□ -0.12
USP44-203ENST00000537435 OSBPL11Q9BXB4 747 aa14.31□□□□□ -0.12
USP44-203ENST00000537435 UPF3AQ9H1J1 476 aaKnown RBP14.31□□□□□ -0.12
USP44-203ENST00000537435 IL1RL2Q9HB29 575 aa14.31□□□□□ -0.12
USP44-203ENST00000537435 TDRD15B5MCY1 1934 aaKnown RBP14.31□□□□□ -0.12
USP44-203ENST00000537435 CCDC162PA2VCL2 907 aa14.31□□□□□ -0.12
USP44-203ENST00000537435 BBIP1A8MTZ0 92 aa14.31□□□□□ -0.12
USP44-203ENST00000537435 MUSKO15146 869 aa14.31□□□□□ -0.12
USP44-203ENST00000537435 TIPRLO75663 272 aa14.31□□□□□ -0.12
USP44-203ENST00000537435 HSPA8P11142 646 aaKnown RBP14.31□□□□□ -0.12
USP44-203ENST00000537435 MTHFD2P13995 350 aa14.31□□□□□ -0.12
USP44-203ENST00000537435 ZNF37AP17032 561 aaPredicted RBP14.31□□□□□ -0.12
USP44-203ENST00000537435 GRIA3P42263 894 aa14.31□□□□□ -0.12
USP44-203ENST00000537435 B3GNT6Q6ZMB0 384 aa14.31□□□□□ -0.12
USP44-203ENST00000537435 ZNF598Q86UK7 904 aaKnown RBP14.31□□□□□ -0.12
USP44-203ENST00000537435 OR2T34Q8NGX1 318 aa14.31□□□□□ -0.12
USP44-203ENST00000537435 OR2T3Q8NH03 318 aa14.31□□□□□ -0.12
USP44-203ENST00000537435 BTN2A3PQ96KV6 586 aa14.31□□□□□ -0.12
USP44-203ENST00000537435 ASB2Q96Q27 587 aa14.31□□□□□ -0.12
USP44-203ENST00000537435 POLR1EQ9GZS1 481 aaKnown RBP14.31□□□□□ -0.12
USP44-203ENST00000537435 MAP10Q9P2G4 905 aa14.31□□□□□ -0.12
USP44-203ENST00000537435 PADI4Q9UM07 663 aa14.31□□□□□ -0.12
USP44-203ENST00000537435 DMTF1Q9Y222 760 aa14.31□□□□□ -0.12
USP44-203ENST00000537435 MYO16Q9Y6X6 1858 aa14.3□□□□□ -0.12
USP44-203ENST00000537435 H3BMM5 538 aa14.3□□□□□ -0.12
USP44-203ENST00000537435 AZIN1O14977 448 aa14.3□□□□□ -0.12
USP44-203ENST00000537435 FGF4P08620 206 aa14.3□□□□□ -0.12
USP44-203ENST00000537435 ATP6V1B2P21281 511 aa14.3□□□□□ -0.12
USP44-203ENST00000537435 PBX3P40426 434 aa14.3□□□□□ -0.12
USP44-203ENST00000537435 SUOXP51687 545 aa14.3□□□□□ -0.12
USP44-203ENST00000537435 NR1H2P55055 460 aa14.3□□□□□ -0.12
USP44-203ENST00000537435 SERINC3Q13530 473 aa14.3□□□□□ -0.12
USP44-203ENST00000537435 GRB7Q14451 532 aa14.3□□□□□ -0.12
USP44-203ENST00000537435 VPS26BQ4G0F5 336 aa14.3□□□□□ -0.12
USP44-203ENST00000537435 DDIASQ8IXT1 998 aa14.3□□□□□ -0.12
USP44-203ENST00000537435 TTC9BQ8N6N2 239 aa14.3□□□□□ -0.12
USP44-203ENST00000537435 FAM110BQ8TC76 370 aa14.3□□□□□ -0.12
USP44-203ENST00000537435 TRPC4APQ8TEL6 797 aa14.3□□□□□ -0.12
USP44-203ENST00000537435 C8orf48Q96LL4 319 aa14.3□□□□□ -0.12
USP44-203ENST00000537435 KCNA7Q96RP8 456 aa14.3□□□□□ -0.12
USP44-203ENST00000537435 TMEM79Q9BSE2 394 aa14.3□□□□□ -0.12
USP44-203ENST00000537435 SPC25Q9HBM1 224 aa14.3□□□□□ -0.12
USP44-203ENST00000537435 ETAA1Q9NY74 926 aa14.3□□□□□ -0.12
USP44-203ENST00000537435 C9JVG2 144 aa14.3□□□□□ -0.12
USP44-203ENST00000537435 NME4O00746 187 aa14.3□□□□□ -0.12
USP44-203ENST00000537435 RPP40O75818 363 aaKnown RBP14.3□□□□□ -0.12
USP44-203ENST00000537435 FGF1P05230 155 aa14.3□□□□□ -0.12
USP44-203ENST00000537435 RPLP2P05387 115 aaKnown RBP14.3□□□□□ -0.12
USP44-203ENST00000537435 CKMT2P17540 419 aa14.3□□□□□ -0.12
USP44-203ENST00000537435 HLA-DPA1P20036 260 aa14.3□□□□□ -0.12
USP44-203ENST00000537435 CAPN3P20807 821 aa14.3□□□□□ -0.12
USP44-203ENST00000537435 OR1E1P30953 314 aa14.3□□□□□ -0.12
USP44-203ENST00000537435 CARM1Q86X55 608 aa14.3□□□□□ -0.12
USP44-203ENST00000537435 PHYKPLQ8IUZ5 450 aa14.3□□□□□ -0.12
USP44-203ENST00000537435 GPR150Q8NGU9 434 aa14.3□□□□□ -0.12
USP44-203ENST00000537435 FUBP3Q96I24 572 aaKnown RBP eCLIP14.3□□□□□ -0.12
USP44-203ENST00000537435 FEM1CQ96JP0 617 aa14.3□□□□□ -0.12
USP44-203ENST00000537435 ATOH8Q96SQ7 321 aa14.3□□□□□ -0.12
USP44-203ENST00000537435 GPATCH1Q9BRR8 931 aaKnown RBP14.3□□□□□ -0.12
USP44-203ENST00000537435 CATSPERZQ9NTU4 200 aa14.3□□□□□ -0.12
USP44-203ENST00000537435 NDUFAF1Q9Y375 327 aa14.3□□□□□ -0.12
USP44-203ENST00000537435 DRGXA6NNA5 263 aa14.29□□□□□ -0.12
USP44-203ENST00000537435 AKAP10O43572 662 aa14.29□□□□□ -0.12
USP44-203ENST00000537435 OAZ2O95190 189 aa14.29□□□□□ -0.12
USP44-203ENST00000537435 PRSS56P0CW18 603 aa14.29□□□□□ -0.12
USP44-203ENST00000537435 CYBAP13498 195 aa14.29□□□□□ -0.12
USP44-203ENST00000537435 GFAPP14136 432 aa14.29□□□□□ -0.12
USP44-203ENST00000537435 HOXB8P17481 243 aaPredicted RBP14.29□□□□□ -0.12
USP44-203ENST00000537435 NELFEP18615 380 aaKnown RBP14.29□□□□□ -0.12
USP44-203ENST00000537435 ZNF235Q14590 738 aa14.29□□□□□ -0.12
USP44-203ENST00000537435 TRIP4Q15650 581 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms