RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 NPIPB15A6NHN6 443 aaPredicted RBP19.65■□□□□ 0.74
TNFRSF1B-204ENST00000536782 AGRPO00253 132 aa19.65■□□□□ 0.74
TNFRSF1B-204ENST00000536782 ZW10O43264 779 aa19.65■□□□□ 0.74
TNFRSF1B-204ENST00000536782 EFSO43281 561 aa19.65■□□□□ 0.74
TNFRSF1B-204ENST00000536782 PGLSO95336 258 aa19.65■□□□□ 0.74
TNFRSF1B-204ENST00000536782 SERPINC1P01008 464 aa19.65■□□□□ 0.74
TNFRSF1B-204ENST00000536782 FUCA1P04066 466 aa19.65■□□□□ 0.74
TNFRSF1B-204ENST00000536782 FGF1P05230 155 aa19.65■□□□□ 0.74
TNFRSF1B-204ENST00000536782 GOLGA6DP0CG33 693 aa19.65■□□□□ 0.74
TNFRSF1B-204ENST00000536782 LIPCP11150 499 aa19.65■□□□□ 0.74
TNFRSF1B-204ENST00000536782 LHCGRP22888 699 aa19.65■□□□□ 0.74
TNFRSF1B-204ENST00000536782 GNPDA1P46926 289 aa19.65■□□□□ 0.74
TNFRSF1B-204ENST00000536782 MAZP56270 477 aaKnown RBP19.65■□□□□ 0.74
TNFRSF1B-204ENST00000536782 CDK3Q00526 305 aa19.65■□□□□ 0.74
TNFRSF1B-204ENST00000536782 TGIF1Q15583 401 aa19.65■□□□□ 0.74
TNFRSF1B-204ENST00000536782 MAP9Q49MG5 647 aa19.65■□□□□ 0.74
TNFRSF1B-204ENST00000536782 TDRD12Q587J7 1177 aaKnown RBP19.65■□□□□ 0.74
TNFRSF1B-204ENST00000536782 FIGNQ5HY92 759 aa19.65■□□□□ 0.74
TNFRSF1B-204ENST00000536782 PHF19Q5T6S3 580 aa19.65■□□□□ 0.74
TNFRSF1B-204ENST00000536782 ARMC12Q5T9G4 340 aa19.65■□□□□ 0.74
TNFRSF1B-204ENST00000536782 RAET1GQ6H3X3 334 aa19.65■□□□□ 0.74
TNFRSF1B-204ENST00000536782 Q6ZVL8 140 aa19.65■□□□□ 0.74
TNFRSF1B-204ENST00000536782 USP45Q70EL2 814 aa19.65■□□□□ 0.74
TNFRSF1B-204ENST00000536782 TMPRSS9Q7Z410 1059 aa19.65■□□□□ 0.74
TNFRSF1B-204ENST00000536782 PIM3Q86V86 326 aa19.65■□□□□ 0.74
TNFRSF1B-204ENST00000536782 C17orf82Q86X59 251 aaPredicted RBP19.65■□□□□ 0.74
TNFRSF1B-204ENST00000536782 NRROSQ86YC3 692 aa19.65■□□□□ 0.74
TNFRSF1B-204ENST00000536782 FRMD8Q9BZ67 464 aaPredicted RBP19.65■□□□□ 0.74
TNFRSF1B-204ENST00000536782 PCDH18Q9HCL0 1135 aa19.65■□□□□ 0.74
TNFRSF1B-204ENST00000536782 GOLGA6AQ9NYA3 693 aa19.65■□□□□ 0.74
TNFRSF1B-204ENST00000536782 SEPT10Q9P0V9 454 aa19.65■□□□□ 0.74
TNFRSF1B-204ENST00000536782 TAAR2Q9P1P5 351 aa19.65■□□□□ 0.74
TNFRSF1B-204ENST00000536782 SUFUQ9UMX1 484 aa19.65■□□□□ 0.74
TNFRSF1B-204ENST00000536782 SPTA1P02549 2419 aa19.64■□□□□ 0.74
TNFRSF1B-204ENST00000536782 PRAMEF33A0A0G2JMD5 474 aa19.64■□□□□ 0.73
TNFRSF1B-204ENST00000536782 RHPN2P1A8MT19 583 aa19.64■□□□□ 0.73
TNFRSF1B-204ENST00000536782 J3QKU1 62 aa19.64■□□□□ 0.73
TNFRSF1B-204ENST00000536782 B4GAT1O43505 415 aa19.64■□□□□ 0.73
TNFRSF1B-204ENST00000536782 PRAMEF10O60809 474 aa19.64■□□□□ 0.73
TNFRSF1B-204ENST00000536782 CPNE6O95741 557 aa19.64■□□□□ 0.73
TNFRSF1B-204ENST00000536782 KRT10P13645 584 aa19.64■□□□□ 0.73
TNFRSF1B-204ENST00000536782 TEAD1P28347 426 aa19.64■□□□□ 0.73
TNFRSF1B-204ENST00000536782 ALDH4A1P30038 563 aa19.64■□□□□ 0.73
TNFRSF1B-204ENST00000536782 PEX6Q13608 980 aa19.64■□□□□ 0.73
TNFRSF1B-204ENST00000536782 NR1I3Q14994 352 aa19.64■□□□□ 0.73
TNFRSF1B-204ENST00000536782 AMZ1Q400G9 498 aa19.64■□□□□ 0.73
TNFRSF1B-204ENST00000536782 TXNRD3NBQ6F5E7 133 aa19.64■□□□□ 0.73
TNFRSF1B-204ENST00000536782 LRRC49Q8IUZ0 686 aa19.64■□□□□ 0.73
TNFRSF1B-204ENST00000536782 NDUFAF2Q8N183 169 aa19.64■□□□□ 0.73
TNFRSF1B-204ENST00000536782 NIPA2Q8N8Q9 360 aa19.64■□□□□ 0.73
TNFRSF1B-204ENST00000536782 MCCC1Q96RQ3 725 aaPredicted RBP19.64■□□□□ 0.73
TNFRSF1B-204ENST00000536782 SEMA6CQ9H3T2 930 aa19.64■□□□□ 0.73
TNFRSF1B-204ENST00000536782 RDH14Q9HBH5 336 aa19.64■□□□□ 0.73
TNFRSF1B-204ENST00000536782 AKAP7Q9P0M2 348 aaPredicted RBP19.64■□□□□ 0.73
TNFRSF1B-204ENST00000536782 IP6K2Q9UHH9 426 aa19.64■□□□□ 0.73
TNFRSF1B-204ENST00000536782 PPIL1Q9Y3C6 166 aa19.64■□□□□ 0.73
TNFRSF1B-204ENST00000536782 BZW2Q9Y6E2 419 aaKnown RBP19.64■□□□□ 0.73
TNFRSF1B-204ENST00000536782 MAST4O15021 2626 aa19.64■□□□□ 0.73
TNFRSF1B-204ENST00000536782 B8ZZF3 427 aa19.63■□□□□ 0.73
TNFRSF1B-204ENST00000536782 ECEL1O95672 775 aa19.63■□□□□ 0.73
TNFRSF1B-204ENST00000536782 CTPS1P17812 591 aa19.63■□□□□ 0.73
TNFRSF1B-204ENST00000536782 AK4P27144 223 aaPredicted RBP19.63■□□□□ 0.73
TNFRSF1B-204ENST00000536782 ETV5P41161 510 aa19.63■□□□□ 0.73
TNFRSF1B-204ENST00000536782 MAPK10P53779 464 aa19.63■□□□□ 0.73
TNFRSF1B-204ENST00000536782 OR1D5P58170 312 aa19.63■□□□□ 0.73
TNFRSF1B-204ENST00000536782 SLC25A11Q02978 314 aaKnown RBP19.63■□□□□ 0.73
TNFRSF1B-204ENST00000536782 DPTQ07507 201 aa19.63■□□□□ 0.73
TNFRSF1B-204ENST00000536782 BIRC2Q13490 618 aa19.63■□□□□ 0.73
TNFRSF1B-204ENST00000536782 KRT81Q14533 505 aa19.63■□□□□ 0.73
TNFRSF1B-204ENST00000536782 PTPRRQ15256 657 aa19.63■□□□□ 0.73
TNFRSF1B-204ENST00000536782 HGSNATQ68CP4 663 aa19.63■□□□□ 0.73
TNFRSF1B-204ENST00000536782 SLC30A9Q6PML9 568 aa19.63■□□□□ 0.73
TNFRSF1B-204ENST00000536782 USP53Q70EK8 1073 aa19.63■□□□□ 0.73
TNFRSF1B-204ENST00000536782 ZNF438Q7Z4V0 828 aa19.63■□□□□ 0.73
TNFRSF1B-204ENST00000536782 TSPAN33Q86UF1 283 aa19.63■□□□□ 0.73
TNFRSF1B-204ENST00000536782 USP7Q93009 1102 aa19.63■□□□□ 0.73
TNFRSF1B-204ENST00000536782 BTBD6Q96KE9 485 aa19.63■□□□□ 0.73
TNFRSF1B-204ENST00000536782 THAP2Q9H0W7 228 aa19.63■□□□□ 0.73
TNFRSF1B-204ENST00000536782 NT5MQ9NPB1 228 aa19.63■□□□□ 0.73
TNFRSF1B-204ENST00000536782 RCOR3Q9P2K3 495 aaPredicted RBP19.63■□□□□ 0.73
TNFRSF1B-204ENST00000536782 ANAPC7Q9UJX3 599 aa19.63■□□□□ 0.73
TNFRSF1B-204ENST00000536782 SLC17A4Q9Y2C5 497 aa19.63■□□□□ 0.73
TNFRSF1B-204ENST00000536782 IVLP07476 585 aa19.62■□□□□ 0.73
TNFRSF1B-204ENST00000536782 GPR1P46091 355 aa19.62■□□□□ 0.73
TNFRSF1B-204ENST00000536782 POLD2P49005 469 aa19.62■□□□□ 0.73
TNFRSF1B-204ENST00000536782 CTBSQ01459 385 aa19.62■□□□□ 0.73
TNFRSF1B-204ENST00000536782 ITKQ08881 620 aa19.62■□□□□ 0.73
TNFRSF1B-204ENST00000536782 NR1D2Q14995 579 aa19.62■□□□□ 0.73
TNFRSF1B-204ENST00000536782 CLPPQ16740 277 aaPredicted RBP19.62■□□□□ 0.73
TNFRSF1B-204ENST00000536782 TMEM164Q5U3C3 297 aa19.62■□□□□ 0.73
TNFRSF1B-204ENST00000536782 TECPR1Q7Z6L1 1165 aa19.62■□□□□ 0.73
TNFRSF1B-204ENST00000536782 TEX26Q8N6G2 289 aa19.62■□□□□ 0.73
TNFRSF1B-204ENST00000536782 PTCD2Q8WV60 388 aaKnown RBP19.62■□□□□ 0.73
TNFRSF1B-204ENST00000536782 PIH1D2Q8WWB5 315 aa19.62■□□□□ 0.73
TNFRSF1B-204ENST00000536782 SYN2Q92777 582 aaPredicted RBP19.62■□□□□ 0.73
TNFRSF1B-204ENST00000536782 SGF29Q96ES7 293 aa19.62■□□□□ 0.73
TNFRSF1B-204ENST00000536782 SEMA3CQ99985 751 aa19.62■□□□□ 0.73
TNFRSF1B-204ENST00000536782 NUP85Q9BW27 656 aa19.62■□□□□ 0.73
TNFRSF1B-204ENST00000536782 FOXJ2Q9P0K8 574 aa19.62■□□□□ 0.73
TNFRSF1B-204ENST00000536782 PCDHB11Q9Y5F2 797 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms