RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 KBTBD6Q86V97 674 aa13.37□□□□□ -0.27
VPS33B-202ENST00000535906 PDSS2Q86YH6 399 aa13.37□□□□□ -0.27
VPS33B-202ENST00000535906 OR4K2Q8NGD2 314 aa13.37□□□□□ -0.27
VPS33B-202ENST00000535906 AUTS2Q8WXX7 1259 aa13.37□□□□□ -0.27
VPS33B-202ENST00000535906 TRMT2BQ96GJ1 504 aaKnown RBP13.37□□□□□ -0.27
VPS33B-202ENST00000535906 MAELQ96JY0 434 aaKnown RBP13.37□□□□□ -0.27
VPS33B-202ENST00000535906 SLC22A12Q96S37 553 aa13.37□□□□□ -0.27
VPS33B-202ENST00000535906 MUC3BQ9H195 1237 aa13.37□□□□□ -0.27
VPS33B-202ENST00000535906 NLE1Q9NVX2 485 aaPredicted RBP13.37□□□□□ -0.27
VPS33B-202ENST00000535906 POLR3BQ9NW08 1133 aaPredicted RBP13.37□□□□□ -0.27
VPS33B-202ENST00000535906 ADAMTS6Q9UKP5 1117 aa13.37□□□□□ -0.27
VPS33B-202ENST00000535906 RIMKLBQ9ULI2 386 aa13.37□□□□□ -0.27
VPS33B-202ENST00000535906 ASB3Q9Y575 518 aa13.37□□□□□ -0.27
VPS33B-202ENST00000535906 ANKRD36A6QL64 1941 aa13.37□□□□□ -0.27
VPS33B-202ENST00000535906 LAMA3Q16787 3333 aa13.37□□□□□ -0.27
VPS33B-202ENST00000535906 SDHDO14521 159 aa13.37□□□□□ -0.27
VPS33B-202ENST00000535906 SNAP91O60641 907 aa13.37□□□□□ -0.27
VPS33B-202ENST00000535906 CRTAMO95727 393 aa13.37□□□□□ -0.27
VPS33B-202ENST00000535906 CCL5P13501 91 aa13.37□□□□□ -0.27
VPS33B-202ENST00000535906 CD1DP15813 335 aa13.37□□□□□ -0.27
VPS33B-202ENST00000535906 PMLP29590 882 aa13.37□□□□□ -0.27
VPS33B-202ENST00000535906 MNX1P50219 401 aaPredicted RBP13.37□□□□□ -0.27
VPS33B-202ENST00000535906 TWF1Q12792 350 aa13.37□□□□□ -0.27
VPS33B-202ENST00000535906 C16orf89Q6UX73 402 aa13.37□□□□□ -0.27
VPS33B-202ENST00000535906 GLT6D1Q7Z4J2 308 aa13.37□□□□□ -0.27
VPS33B-202ENST00000535906 DNAJB7Q7Z6W7 309 aaPredicted RBP13.37□□□□□ -0.27
VPS33B-202ENST00000535906 SNX32Q86XE0 403 aa13.37□□□□□ -0.27
VPS33B-202ENST00000535906 ZFRQ96KR1 1074 aaKnown RBP13.37□□□□□ -0.27
VPS33B-202ENST00000535906 STK39Q9UEW8 545 aa13.37□□□□□ -0.27
VPS33B-202ENST00000535906 AIM2O14862 343 aa13.36□□□□□ -0.27
VPS33B-202ENST00000535906 SNUPNO95149 360 aaKnown RBP13.36□□□□□ -0.27
VPS33B-202ENST00000535906 LYNP07948 512 aa13.36□□□□□ -0.27
VPS33B-202ENST00000535906 ZNF37AP17032 561 aaPredicted RBP13.36□□□□□ -0.27
VPS33B-202ENST00000535906 OGNP20774 298 aaKnown RBP13.36□□□□□ -0.27
VPS33B-202ENST00000535906 NUDT2P50583 147 aa13.36□□□□□ -0.27
VPS33B-202ENST00000535906 ZXDBP98169 803 aa13.36□□□□□ -0.27
VPS33B-202ENST00000535906 XIAPP98170 497 aa13.36□□□□□ -0.27
VPS33B-202ENST00000535906 PTPRRQ15256 657 aa13.36□□□□□ -0.27
VPS33B-202ENST00000535906 TYSND1Q2T9J0 566 aa13.36□□□□□ -0.27
VPS33B-202ENST00000535906 EML3Q32P44 896 aa13.36□□□□□ -0.27
VPS33B-202ENST00000535906 CNKSR3Q6P9H4 555 aa13.36□□□□□ -0.27
VPS33B-202ENST00000535906 SDCCAG8Q86SQ7 713 aaPredicted RBP13.36□□□□□ -0.27
VPS33B-202ENST00000535906 CUZD1Q86UP6 607 aa13.36□□□□□ -0.27
VPS33B-202ENST00000535906 SLC22A9Q8IVM8 553 aa13.36□□□□□ -0.27
VPS33B-202ENST00000535906 SLC39A11Q8N1S5 342 aa13.36□□□□□ -0.27
VPS33B-202ENST00000535906 RYBPQ8N488 228 aaPredicted RBP13.36□□□□□ -0.27
VPS33B-202ENST00000535906 KYQ8NBH2 561 aa13.36□□□□□ -0.27
VPS33B-202ENST00000535906 TOP1MTQ969P6 601 aa13.36□□□□□ -0.27
VPS33B-202ENST00000535906 TMEM169Q96HH4 297 aa13.36□□□□□ -0.27
VPS33B-202ENST00000535906 SERPINI1Q99574 410 aa13.36□□□□□ -0.27
VPS33B-202ENST00000535906 KLHL4Q9C0H6 718 aa13.36□□□□□ -0.27
VPS33B-202ENST00000535906 GSTO2Q9H4Y5 243 aa13.36□□□□□ -0.27
VPS33B-202ENST00000535906 PDP2Q9P2J9 529 aa13.36□□□□□ -0.27
VPS33B-202ENST00000535906 ARIH1Q9Y4X5 557 aaPredicted RBP13.36□□□□□ -0.27
VPS33B-202ENST00000535906 RAI2Q9Y5P3 530 aa13.36□□□□□ -0.27
VPS33B-202ENST00000535906 TRPC5OSA6NMA1 111 aa13.35□□□□□ -0.27
VPS33B-202ENST00000535906 UBFD1O14562 309 aaKnown RBP13.35□□□□□ -0.27
VPS33B-202ENST00000535906 PRRG1O14668 218 aa13.35□□□□□ -0.27
VPS33B-202ENST00000535906 MBL2P11226 248 aaPredicted RBP13.35□□□□□ -0.27
VPS33B-202ENST00000535906 ARSAP15289 507 aa13.35□□□□□ -0.27
VPS33B-202ENST00000535906 RAG1P15918 1043 aa13.35□□□□□ -0.27
VPS33B-202ENST00000535906 TSPAN8P19075 237 aa13.35□□□□□ -0.27
VPS33B-202ENST00000535906 IMPDH1P20839 514 aa13.35□□□□□ -0.27
VPS33B-202ENST00000535906 MZF1P28698 734 aaPredicted RBP13.35□□□□□ -0.27
VPS33B-202ENST00000535906 CDKN1CP49918 316 aaPredicted RBP13.35□□□□□ -0.27
VPS33B-202ENST00000535906 SUOXP51687 545 aa13.35□□□□□ -0.27
VPS33B-202ENST00000535906 C1QTNF8P60827 252 aa13.35□□□□□ -0.27
VPS33B-202ENST00000535906 CYLC2Q14093 348 aaPredicted RBP13.35□□□□□ -0.27
VPS33B-202ENST00000535906 TAF1AQ15573 450 aaPredicted RBP13.35□□□□□ -0.27
VPS33B-202ENST00000535906 DSELQ8IZU8 1212 aa13.35□□□□□ -0.27
VPS33B-202ENST00000535906 HIPK4Q8NE63 616 aa13.35□□□□□ -0.27
VPS33B-202ENST00000535906 LPCAT1Q8NF37 534 aa13.35□□□□□ -0.27
VPS33B-202ENST00000535906 ZNF689Q96CS4 500 aaPredicted RBP13.35□□□□□ -0.27
VPS33B-202ENST00000535906 AARSD1Q9BTE6 412 aaKnown RBP13.35□□□□□ -0.27
VPS33B-202ENST00000535906 ZBTB26Q9HCK0 441 aa13.35□□□□□ -0.27
VPS33B-202ENST00000535906 PCDH10Q9P2E7 1040 aa13.35□□□□□ -0.27
VPS33B-202ENST00000535906 COPG1Q9Y678 874 aaKnown RBP13.35□□□□□ -0.27
VPS33B-202ENST00000535906 A0A0U1RQS6 177 aa13.35□□□□□ -0.27
VPS33B-202ENST00000535906 UBA6A0AVT1 1052 aaPredicted RBP13.35□□□□□ -0.27
VPS33B-202ENST00000535906 H3BMM5 538 aa13.35□□□□□ -0.27
VPS33B-202ENST00000535906 H3BNX3 289 aa13.35□□□□□ -0.27
VPS33B-202ENST00000535906 CASQ2O14958 399 aaPredicted RBP13.35□□□□□ -0.27
VPS33B-202ENST00000535906 TMCC1O94876 653 aa13.35□□□□□ -0.27
VPS33B-202ENST00000535906 UBTFL6P0CB48 400 aaPredicted RBP13.35□□□□□ -0.27
VPS33B-202ENST00000535906 CCNHP51946 323 aaPredicted RBP13.35□□□□□ -0.27
VPS33B-202ENST00000535906 SMAD3P84022 425 aaKnown RBP13.35□□□□□ -0.27
VPS33B-202ENST00000535906 RAB33AQ14088 237 aa13.35□□□□□ -0.27
VPS33B-202ENST00000535906 VEPH1Q14D04 833 aa13.35□□□□□ -0.27
VPS33B-202ENST00000535906 HERC3Q15034 1050 aa13.35□□□□□ -0.27
VPS33B-202ENST00000535906 ZNF678Q5SXM1 525 aa13.35□□□□□ -0.27
VPS33B-202ENST00000535906 LPCAT4Q643R3 524 aa13.35□□□□□ -0.27
VPS33B-202ENST00000535906 CEP70Q8NHQ1 597 aa13.35□□□□□ -0.27
VPS33B-202ENST00000535906 GDPD5Q8WTR4 605 aa13.35□□□□□ -0.27
VPS33B-202ENST00000535906 EXT2Q93063 718 aa13.35□□□□□ -0.27
VPS33B-202ENST00000535906 ZNF558Q96NG5 402 aa13.35□□□□□ -0.27
VPS33B-202ENST00000535906 EBF3Q9H4W6 596 aa13.35□□□□□ -0.27
VPS33B-202ENST00000535906 EML4Q9HC35 981 aaKnown RBP13.35□□□□□ -0.27
VPS33B-202ENST00000535906 TRPC7Q9HCX4 862 aa13.35□□□□□ -0.27
VPS33B-202ENST00000535906 ZNF334Q9HCZ1 680 aaPredicted RBP13.35□□□□□ -0.27
VPS33B-202ENST00000535906 STOML2Q9UJZ1 356 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms